RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ZNF70Q9UC06 446 aaPredicted RBP15.3■□□□□ 0.04
LSM2-208ENST00000375661 MFSD14BQ5SR56 506 aa15.29■□□□□ 0.04
LSM2-208ENST00000375661 LMBR1LQ6UX01 489 aa15.29■□□□□ 0.04
LSM2-208ENST00000375661 MS4A4AQ96JQ5 239 aa15.29■□□□□ 0.04
LSM2-208ENST00000375661 TMEM106CQ9BVX2 250 aa15.29■□□□□ 0.04
LSM2-208ENST00000375661 CNNM1Q9NRU3 951 aa15.29■□□□□ 0.04
LSM2-208ENST00000375661 AOX1Q06278 1338 aa15.28■□□□□ 0.04
LSM2-208ENST00000375661 GRM8O00222 908 aa15.28■□□□□ 0.04
LSM2-208ENST00000375661 TNNI2P48788 182 aa15.28■□□□□ 0.04
LSM2-208ENST00000375661 GTF2A2P52657 109 aa15.28■□□□□ 0.04
LSM2-208ENST00000375661 NBPF11Q86T75 865 aa15.28■□□□□ 0.04
LSM2-208ENST00000375661 ELP3Q9H9T3 547 aa15.28■□□□□ 0.04
LSM2-208ENST00000375661 ZFYVE28Q9HCC9 887 aa15.28■□□□□ 0.04
LSM2-208ENST00000375661 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
LSM2-208ENST00000375661 TTF2Q9UNY4 1162 aaKnown RBP15.28■□□□□ 0.04
LSM2-208ENST00000375661 HTTP42858 3142 aa15.28■□□□□ 0.04
LSM2-208ENST00000375661 PLIN1O60240 522 aa15.27■□□□□ 0.04
LSM2-208ENST00000375661 BCAR3O75815 825 aa15.27■□□□□ 0.04
LSM2-208ENST00000375661 HIBADHP31937 336 aaKnown RBP15.27■□□□□ 0.04
LSM2-208ENST00000375661 MAP3K9P80192 1104 aa15.27■□□□□ 0.04
LSM2-208ENST00000375661 TAF1CQ15572 869 aaPredicted RBP15.27■□□□□ 0.04
LSM2-208ENST00000375661 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.27■□□□□ 0.04
LSM2-208ENST00000375661 ZNF333Q96JL9 665 aa15.27■□□□□ 0.04
LSM2-208ENST00000375661 TEPSINQ96N21 525 aa15.27■□□□□ 0.04
LSM2-208ENST00000375661 TDRD3Q9H7E2 651 aaKnown RBP15.27■□□□□ 0.04
LSM2-208ENST00000375661 JAG2Q9Y219 1238 aa15.27■□□□□ 0.04
LSM2-208ENST00000375661 CSADQ9Y600 493 aa15.27■□□□□ 0.04
LSM2-208ENST00000375661 F6X3S4 739 aa15.26■□□□□ 0.03
LSM2-208ENST00000375661 WDHD1O75717 1129 aaPredicted RBP15.26■□□□□ 0.03
LSM2-208ENST00000375661 ALDH1L1O75891 902 aa15.26■□□□□ 0.03
LSM2-208ENST00000375661 EN2P19622 333 aaPredicted RBP15.26■□□□□ 0.03
LSM2-208ENST00000375661 HDLBPQ00341 1268 aaKnown RBP15.26■□□□□ 0.03
LSM2-208ENST00000375661 EPHA10Q5JZY3 1008 aa15.26■□□□□ 0.03
LSM2-208ENST00000375661 DZIP1LQ8IYY4 767 aaKnown RBP15.26■□□□□ 0.03
LSM2-208ENST00000375661 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.26■□□□□ 0.032e-9■■■■□ 21.6
LSM2-208ENST00000375661 BRI3BPQ8WY22 251 aa15.26■□□□□ 0.03
LSM2-208ENST00000375661 ZNF594Q96JF6 807 aaPredicted RBP15.26■□□□□ 0.03
LSM2-208ENST00000375661 ZCCHC17Q9NP64 241 aaKnown RBP15.26■□□□□ 0.03
LSM2-208ENST00000375661 CCL15-CCL14A0A0B4J2E2 113 aa15.25■□□□□ 0.03
LSM2-208ENST00000375661 CRKP46108 304 aa15.25■□□□□ 0.03
LSM2-208ENST00000375661 VGLL4Q14135 290 aa15.25■□□□□ 0.03
LSM2-208ENST00000375661 CCL15Q16663 113 aa15.25■□□□□ 0.03
LSM2-208ENST00000375661 SLC9C1Q4G0N8 1177 aa15.25■□□□□ 0.03
LSM2-208ENST00000375661 FAM84BQ96KN1 310 aaPredicted RBP15.25■□□□□ 0.03
LSM2-208ENST00000375661 C9orf78Q9NZ63 289 aaPredicted RBP15.25■□□□□ 0.03
LSM2-208ENST00000375661 NOB1Q9ULX3 412 aaKnown RBP15.25■□□□□ 0.03
LSM2-208ENST00000375661 MYH13Q9UKX3 1938 aa15.25■□□□□ 0.03
LSM2-208ENST00000375661 MROH5Q6ZUA9 1318 aa15.24■□□□□ 0.03
LSM2-208ENST00000375661 GYG1P46976 350 aa15.24■□□□□ 0.03
LSM2-208ENST00000375661 CAP1Q01518 475 aa15.24■□□□□ 0.03
LSM2-208ENST00000375661 TBC1D22AQ8WUA7 517 aa15.24■□□□□ 0.03
LSM2-208ENST00000375661 HOOK2Q96ED9 719 aa15.24■□□□□ 0.03
LSM2-208ENST00000375661 MRIQ9BWK5 157 aa15.24■□□□□ 0.03
LSM2-208ENST00000375661 PTPRCP08575 1304 aa15.23■□□□□ 0.03
LSM2-208ENST00000375661 SPDYE5A6NIY4 337 aa15.23■□□□□ 0.03
LSM2-208ENST00000375661 TCP10L2B9ZVM9 353 aa15.23■□□□□ 0.03
LSM2-208ENST00000375661 GNRH1P01148 92 aa15.23■□□□□ 0.03
LSM2-208ENST00000375661 CETPP11597 493 aa15.23■□□□□ 0.03
LSM2-208ENST00000375661 PRMT2P55345 433 aa15.23■□□□□ 0.03
LSM2-208ENST00000375661 TMEM39BQ9GZU3 492 aa15.23■□□□□ 0.03
LSM2-208ENST00000375661 TLR2O60603 784 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 KIF22Q14807 665 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 FKBP1CQ5VVH2 108 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 FBXO33Q7Z6M2 555 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 FAM83AQ86UY5 434 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 ERO1BQ86YB8 467 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 FAM43AQ8N2R8 423 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 OTUD5Q96G74 571 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 SRCIN1Q9C0H9 1055 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 RCAN3Q9UKA8 241 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 RIPOR2Q9Y4F9 1068 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 PTCH2Q9Y6C5 1203 aa15.22■□□□□ 0.03
LSM2-208ENST00000375661 MKI67P46013 3256 aaKnown RBP15.21■□□□□ 0.03
LSM2-208ENST00000375661 MAST3O60307 1309 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 CENPFP49454 3210 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 FXR1P51114 621 aaKnown RBP eCLIP15.21■□□□□ 0.03
LSM2-208ENST00000375661 SLC4A8Q2Y0W8 1093 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 CAVIN4Q5BKX8 364 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 VPS37DQ86XT2 251 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 ARHGAP45Q92619 1136 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 TEKT1Q969V4 418 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 ZDHHC15Q96MV8 337 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 TMOD2Q9NZR1 351 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 SUGT1Q9Y2Z0 365 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 ZSWIM8A7E2V4 1837 aa15.21■□□□□ 0.03
LSM2-208ENST00000375661 RPAP1Q9BWH6 1393 aaPredicted RBP15.21■□□□□ 0.02
LSM2-208ENST00000375661 UTYO14607 1347 aa15.2■□□□□ 0.02
LSM2-208ENST00000375661 KIF16BQ96L93 1317 aa15.2■□□□□ 0.02
LSM2-208ENST00000375661 PPIL2Q13356 520 aa15.2■□□□□ 0.02
LSM2-208ENST00000375661 SNAPC2Q13487 334 aa15.2■□□□□ 0.02
LSM2-208ENST00000375661 PUS3Q9BZE2 481 aaKnown RBP15.2■□□□□ 0.02
LSM2-208ENST00000375661 TNNQ9UQP3 1299 aa15.2■□□□□ 0.02
LSM2-208ENST00000375661 SNCAIPQ9Y6H5 919 aa15.2■□□□□ 0.02
LSM2-208ENST00000375661 AK9Q5TCS8 1911 aa15.19■□□□□ 0.02
LSM2-208ENST00000375661 LACTBP83111 547 aaPredicted RBP15.19■□□□□ 0.02
LSM2-208ENST00000375661 RABL6Q3YEC7 729 aaPredicted RBP15.19■□□□□ 0.02
LSM2-208ENST00000375661 DCAF15Q66K64 600 aa15.19■□□□□ 0.02
LSM2-208ENST00000375661 SLC4A10Q6U841 1118 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms