RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 INCENPQ9NQS7 918 aa13.09□□□□□ -0.31
PTCH1-203ENST00000375274 ANGEL1Q9UNK9 670 aaKnown RBP13.09□□□□□ -0.31
PTCH1-203ENST00000375274 TRPM2O94759 1503 aa13.09□□□□□ -0.31
PTCH1-203ENST00000375274 OPA1O60313 960 aa13.09□□□□□ -0.31
PTCH1-203ENST00000375274 KRT2P35908 639 aa13.09□□□□□ -0.31
PTCH1-203ENST00000375274 CAPZA3Q96KX2 299 aa13.09□□□□□ -0.31
PTCH1-203ENST00000375274 GABPB1Q06547 395 aaPredicted RBP13.08□□□□□ -0.31
PTCH1-203ENST00000375274 HEATR3Q7Z4Q2 680 aa13.08□□□□□ -0.31
PTCH1-203ENST00000375274 KLHL34Q8N239 644 aa13.08□□□□□ -0.31
PTCH1-203ENST00000375274 CTNNBL1Q8WYA6 563 aaPredicted RBP13.08□□□□□ -0.31
PTCH1-203ENST00000375274 CUL5Q93034 780 aa13.08□□□□□ -0.31
PTCH1-203ENST00000375274 B4E1Z4 1266 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 MAGEB6Q8N7X4 407 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 MIGA1Q8NAN2 632 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 CABP5Q9NP86 173 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 NDUFB9Q9Y6M9 179 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 TSPY3P0CV98 308 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 TSPY8P0CW00 308 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 IGSF22Q8N9C0 903 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 IPO4Q8TEX9 1081 aaKnown RBP13.08□□□□□ -0.32
PTCH1-203ENST00000375274 ATRIPQ8WXE1 791 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 EBAG9O00559 213 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 ARHGAP6O43182 974 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 HDXQ7Z353 690 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 APPBP2Q92624 585 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 TMEM87BQ96K49 555 aa13.08□□□□□ -0.32
PTCH1-203ENST00000375274 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 KDM5DQ9BY66 1539 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 PTH1RQ03431 593 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 WWC2Q6AWC2 1192 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 TTC6Q86TZ1 520 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 GOLGA6L10A0A0M3HER8 536 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 LRMPQ12912 555 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 KIAA0753Q2KHM9 967 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 MAGEB6P1A0A0J9YX57 407 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 IRS4O14654 1257 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-203ENST00000375274 MCM7P33993 719 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 CCT6AP40227 531 aaKnown RBP13.07□□□□□ -0.32
PTCH1-203ENST00000375274 CCDC122Q5T0U0 273 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 SPECC1LQ69YQ0 1117 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 NBPF11Q86T75 865 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 NFE2L3Q9Y4A8 694 aa13.07□□□□□ -0.32
PTCH1-203ENST00000375274 KCNA6P17658 529 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 NAPAP54920 295 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 NLRP12P59046 1061 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 EIF4A1P60842 406 aaKnown RBP13.06□□□□□ -0.32
PTCH1-203ENST00000375274 GCKRQ14397 625 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
PTCH1-203ENST00000375274 MLKLQ8NB16 471 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 EDC3Q96F86 508 aaKnown RBP13.06□□□□□ -0.32
PTCH1-203ENST00000375274 OSBPL3Q9H4L5 887 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 RGS12O14924 1447 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 IBTKQ9P2D0 1353 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-203ENST00000375274 BICDL2A1A5D9 508 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 NR1I2O75469 434 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 DTHD1Q6ZMT9 781 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 ZSWIM6Q9HCJ5 1215 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 POLR2DO15514 142 aaKnown RBP13.06□□□□□ -0.32
PTCH1-203ENST00000375274 GPAA1O43292 621 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 CUTAO60888 179 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 WDHD1O75717 1129 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-203ENST00000375274 MBD4O95243 580 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 VAV2P52735 878 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 STXBP4Q6ZWJ1 553 aa13.06□□□□□ -0.32
PTCH1-203ENST00000375274 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
PTCH1-203ENST00000375274 TPCN1Q9ULQ1 816 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 TBX22Q9Y458 520 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 FAM89AQ96GI7 184 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 SELENOOQ9BVL4 669 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 XPO4Q9C0E2 1151 aaKnown RBP13.05□□□□□ -0.32
PTCH1-203ENST00000375274 ERVK-7P63135 1459 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 TBCAO75347 108 aaKnown RBP13.05□□□□□ -0.32
PTCH1-203ENST00000375274 ADAMTS2O95450 1211 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 ATP5JP18859 108 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 CHMP4BP1P59074 171 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 C10orf67Q8IYJ2 551 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 EAF2Q96CJ1 260 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-203ENST00000375274 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
PTCH1-203ENST00000375274 MBD5Q9P267 1494 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 DEXIO95424 95 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 ARID5AQ03989 594 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 GPATCH11Q8N954 259 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 VPS16Q9H269 839 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 STAP2Q9UGK3 403 aa13.05□□□□□ -0.32
PTCH1-203ENST00000375274 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 CABLES1Q8TDN4 633 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 A0A0D9SFI3 127 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 ATP2C2O75185 946 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 CCDC172P0C7W6 258 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 ZNF174Q15697 407 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 KRT40Q6A162 431 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 CCDC91Q7Z6B0 441 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 SYCP3Q8IZU3 236 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 MICALL1Q8N3F8 863 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms