RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 CIAO1O76071 339 aa18.49■□□□□ 0.55
CCDC40-202ENST00000374876 ATP5JP18859 108 aa18.49■□□□□ 0.55
CCDC40-202ENST00000374876 CREB3L3Q68CJ9 461 aa18.49■□□□□ 0.55
CCDC40-202ENST00000374876 ZNF526Q8TF50 670 aaPredicted RBP18.49■□□□□ 0.55
CCDC40-202ENST00000374876 LARP6Q9BRS8 491 aaKnown RBP18.49■□□□□ 0.55
CCDC40-202ENST00000374876 DBNLQ9UJU6 430 aaKnown RBP18.49■□□□□ 0.55
CCDC40-202ENST00000374876 IL15P40933 162 aaPredicted RBP18.48■□□□□ 0.55
CCDC40-202ENST00000374876 KCNQ5Q9NR82 932 aa18.48■□□□□ 0.55
CCDC40-202ENST00000374876 FBXO3Q9UK99 471 aa18.48■□□□□ 0.55
CCDC40-202ENST00000374876 G3V3G9 751 aa18.47■□□□□ 0.55
CCDC40-202ENST00000374876 FZD9O00144 591 aa18.47■□□□□ 0.55
CCDC40-202ENST00000374876 NASPP49321 788 aaPredicted RBP18.47■□□□□ 0.55
CCDC40-202ENST00000374876 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
CCDC40-202ENST00000374876 CEP126Q9P2H0 1117 aa18.47■□□□□ 0.55
CCDC40-202ENST00000374876 SMC3Q9UQE7 1217 aa18.47■□□□□ 0.55
CCDC40-202ENST00000374876 RNF20Q5VTR2 975 aa18.47■□□□□ 0.55
CCDC40-202ENST00000374876 ANP32BQ92688 251 aaKnown RBP18.47■□□□□ 0.55
CCDC40-202ENST00000374876 ZSCAN31Q96LW9 406 aaPredicted RBP18.47■□□□□ 0.55
CCDC40-202ENST00000374876 RBM27Q9P2N5 1060 aaKnown RBP18.47■□□□□ 0.55
CCDC40-202ENST00000374876 ZNRF3Q9ULT6 936 aa18.47■□□□□ 0.55
CCDC40-202ENST00000374876 A0A1B0GUL6 1792 aa18.47■□□□□ 0.55
CCDC40-202ENST00000374876 RPAP1Q9BWH6 1393 aaPredicted RBP18.46■□□□□ 0.55
CCDC40-202ENST00000374876 ZNF541Q9H0D2 1346 aa18.46■□□□□ 0.55
CCDC40-202ENST00000374876 YDJCA8MPS7 323 aa18.46■□□□□ 0.55
CCDC40-202ENST00000374876 ECE2O60344 883 aa18.46■□□□□ 0.55
CCDC40-202ENST00000374876 PSMA5P28066 241 aa18.46■□□□□ 0.55
CCDC40-202ENST00000374876 UBE4AQ14139 1066 aa18.46■□□□□ 0.55
CCDC40-202ENST00000374876 SH2B1Q9NRF2 756 aaPredicted RBP18.46■□□□□ 0.55
CCDC40-202ENST00000374876 TIAM2Q8IVF5 1701 aa18.46■□□□□ 0.55
CCDC40-202ENST00000374876 MED23Q9ULK4 1368 aa18.46■□□□□ 0.54
CCDC40-202ENST00000374876 SLC27A2O14975 620 aa18.45■□□□□ 0.54
CCDC40-202ENST00000374876 DDNO94850 711 aaPredicted RBP18.45■□□□□ 0.54
CCDC40-202ENST00000374876 FOXD4L6Q3SYB3 417 aaPredicted RBP18.45■□□□□ 0.54
CCDC40-202ENST00000374876 FOXD4L3Q6VB84 417 aaPredicted RBP18.45■□□□□ 0.54
CCDC40-202ENST00000374876 IRS2Q9Y4H2 1338 aa18.45■□□□□ 0.54
CCDC40-202ENST00000374876 RAD17O75943 681 aa18.45■□□□□ 0.54
CCDC40-202ENST00000374876 GYG1P46976 350 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 EIF6P56537 245 aaKnown RBP18.44■□□□□ 0.54
CCDC40-202ENST00000374876 DPY19L2Q6NUT2 758 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 EDC3Q96F86 508 aaKnown RBP18.44■□□□□ 0.54
CCDC40-202ENST00000374876 DBNDD2Q9BQY9 259 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 RRAGDQ9NQL2 400 aaPredicted RBP18.44■□□□□ 0.54
CCDC40-202ENST00000374876 GLTPD2A6NH11 291 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 STX6O43752 255 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 LARGE1O95461 756 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 ZSCAN22P10073 491 aaPredicted RBP18.44■□□□□ 0.54
CCDC40-202ENST00000374876 FGFR2P21802 821 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 CXCL9Q07325 125 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 PUM3Q15397 648 aaKnown RBP18.44■□□□□ 0.54
CCDC40-202ENST00000374876 CCDC83Q8IWF9 413 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 TRIM44Q96DX7 344 aaPredicted RBP18.44■□□□□ 0.54
CCDC40-202ENST00000374876 TMEM63CQ9P1W3 806 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 GJA3Q9Y6H8 435 aa18.44■□□□□ 0.54
CCDC40-202ENST00000374876 SYT1P21579 422 aa18.43■□□□□ 0.54
CCDC40-202ENST00000374876 TIMM10P62072 90 aa18.43■□□□□ 0.54
CCDC40-202ENST00000374876 FAM84BQ96KN1 310 aaPredicted RBP18.43■□□□□ 0.54
CCDC40-202ENST00000374876 DNAJC2Q99543 621 aaKnown RBP18.43■□□□□ 0.54
CCDC40-202ENST00000374876 ZC3H4Q9UPT8 1303 aaKnown RBP18.42■□□□□ 0.54
CCDC40-202ENST00000374876 ATP2B3Q16720 1220 aa18.42■□□□□ 0.54
CCDC40-202ENST00000374876 ZNF589Q86UQ0 364 aaPredicted RBP18.42■□□□□ 0.54
CCDC40-202ENST00000374876 HMG20BQ9P0W2 317 aa18.42■□□□□ 0.54
CCDC40-202ENST00000374876 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
CCDC40-202ENST00000374876 CCDC173Q0VFZ6 552 aa18.42■□□□□ 0.54
CCDC40-202ENST00000374876 BLOC1S2Q6QNY1 142 aa18.42■□□□□ 0.54
CCDC40-202ENST00000374876 C15orf52Q6ZUT6 534 aaKnown RBP18.42■□□□□ 0.54
CCDC40-202ENST00000374876 ZNF784Q8NCA9 323 aaPredicted RBP18.42■□□□□ 0.54
CCDC40-202ENST00000374876 LPIN2Q92539 896 aa18.42■□□□□ 0.54
CCDC40-202ENST00000374876 HAUS7Q99871 368 aa18.42■□□□□ 0.54
CCDC40-202ENST00000374876 COA1Q9GZY4 146 aa18.42■□□□□ 0.54
CCDC40-202ENST00000374876 SYAP1Q96A49 352 aaPredicted RBP18.41■□□□□ 0.54
CCDC40-202ENST00000374876 CD209Q9NNX6 404 aa18.41■□□□□ 0.54
CCDC40-202ENST00000374876 ATP6V1DQ9Y5K8 247 aa18.41■□□□□ 0.54
CCDC40-202ENST00000374876 SYCE3A1L190 88 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 IFIT1P09914 478 aaKnown RBP18.4■□□□□ 0.54
CCDC40-202ENST00000374876 SLC5A1P13866 664 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 GJB2P29033 226 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 BCAMP50895 628 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 ANKRD1Q15327 319 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 ME3Q16798 604 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 CIAPIN1Q6FI81 312 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 LRSAM1Q6UWE0 723 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 PODNQ7Z5L7 613 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 USP48Q86UV5 1035 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 NEUROD6Q96NK8 337 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 GDPD2Q9HCC8 539 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 NDUFB9Q9Y6M9 179 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 PSMD14O00487 310 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 HIBADHP31937 336 aaKnown RBP18.4■□□□□ 0.54
CCDC40-202ENST00000374876 ZNF804AQ7Z570 1209 aa18.4■□□□□ 0.54
CCDC40-202ENST00000374876 IQSEC3Q9UPP2 1182 aaPredicted RBP18.4■□□□□ 0.54
CCDC40-202ENST00000374876 SCN9AQ15858 1988 aa18.39■□□□□ 0.53
CCDC40-202ENST00000374876 A0A1B0GUL7 405 aa18.39■□□□□ 0.53
CCDC40-202ENST00000374876 ADORA1P30542 326 aa18.39■□□□□ 0.53
CCDC40-202ENST00000374876 VPS37DQ86XT2 251 aa18.39■□□□□ 0.53
CCDC40-202ENST00000374876 GPC2Q8N158 579 aa18.39■□□□□ 0.53
CCDC40-202ENST00000374876 FBXW7Q969H0 707 aa18.39■□□□□ 0.53
CCDC40-202ENST00000374876 RRAGCQ9HB90 399 aa18.39■□□□□ 0.53
CCDC40-202ENST00000374876 NMRK2Q9NPI5 230 aa18.39■□□□□ 0.53
CCDC40-202ENST00000374876 GPR108Q9NPR9 543 aa18.39■□□□□ 0.53
CCDC40-202ENST00000374876 AKAP2Q9Y2D5 859 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms