RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 CERS5Q8N5B7 392 aa12.1□□□□□ -0.47
HLA-DOA-202ENST00000374813 JARID2Q92833 1246 aaPredicted RBP12.1□□□□□ -0.47
HLA-DOA-202ENST00000374813 MPHOSPH8Q99549 860 aa12.1□□□□□ -0.47
HLA-DOA-202ENST00000374813 GREM2Q9H772 168 aa12.1□□□□□ -0.47
HLA-DOA-202ENST00000374813 LAS1LQ9Y4W2 734 aaKnown RBP12.1□□□□□ -0.47
HLA-DOA-202ENST00000374813 PCDHAC2Q9Y5I4 1007 aa12.1□□□□□ -0.47
HLA-DOA-202ENST00000374813 OTOFQ9HC10 1997 aa12.1□□□□□ -0.47
HLA-DOA-202ENST00000374813 ZSWIM8A7E2V4 1837 aa12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 IRF6O14896 467 aa12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 DDX58O95786 925 aaKnown RBP12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 TRIM26Q12899 539 aaPredicted RBP12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 TEPSINQ96N21 525 aa12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 UNC93B1Q9H1C4 597 aa12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 ZNF70Q9UC06 446 aaPredicted RBP12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 CPA4Q9UI42 421 aa12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 SERPINA10Q9UK55 444 aa12.09□□□□□ -0.47
HLA-DOA-202ENST00000374813 MYH3P11055 1940 aa12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 IL1R1P14778 569 aa12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 KLRK1P26718 216 aa12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 CTGFP29279 349 aa12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 TMPOP42166 694 aaKnown RBP12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 FCGRTP55899 365 aa12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 PPIL2Q13356 520 aa12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 PXYLP1Q8TE99 480 aa12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 HOOK2Q96ED9 719 aa12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 PAWRQ96IZ0 340 aaKnown RBP12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 METTL22Q9BUU2 404 aaPredicted RBP12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 CHMP4AQ9BY43 222 aa12.08□□□□□ -0.48
HLA-DOA-202ENST00000374813 ADCY3O60266 1144 aa12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 PRKCZQ05513 592 aa12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 PPATQ06203 517 aa12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 DUSP27Q5VZP5 1158 aa12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 FAM109BQ6ICB4 259 aaPredicted RBP12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 C15orf52Q6ZUT6 534 aaKnown RBP12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 ZNF804AQ7Z570 1209 aa12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 ANKRD23Q86SG2 305 aa12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 DEFB118Q96PH6 123 aa12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 TMEM39BQ9GZU3 492 aa12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 FAM205AQ6ZU69 1335 aa12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 RPTORQ8N122 1335 aa12.07□□□□□ -0.48
HLA-DOA-202ENST00000374813 PDHXO00330 501 aa12.06□□□□□ -0.48
HLA-DOA-202ENST00000374813 ANKLE1Q8NAG6 615 aa12.06□□□□□ -0.48
HLA-DOA-202ENST00000374813 SYMPKQ92797 1274 aaKnown RBP12.06□□□□□ -0.48
HLA-DOA-202ENST00000374813 UBE2OQ9C0C9 1292 aaKnown RBP12.06□□□□□ -0.48
HLA-DOA-202ENST00000374813 TDRD3Q9H7E2 651 aaKnown RBP12.06□□□□□ -0.48
HLA-DOA-202ENST00000374813 PHAXQ9H814 394 aaKnown RBP12.06□□□□□ -0.48
HLA-DOA-202ENST00000374813 PAK6Q9NQU5 681 aaPredicted RBP12.06□□□□□ -0.48
HLA-DOA-202ENST00000374813 SNCAIPQ9Y6H5 919 aa12.06□□□□□ -0.48
HLA-DOA-202ENST00000374813 SPEF2Q9C093 1822 aa12.06□□□□□ -0.48
HLA-DOA-202ENST00000374813 ADGRA2Q96PE1 1338 aa12.06□□□□□ -0.48
HLA-DOA-202ENST00000374813 TCP10L2B9ZVM9 353 aa12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 ITGA6P23229 1130 aa12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 MAGEA10P43363 369 aaPredicted RBP12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 CHRNDQ07001 517 aa12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 DZIP1LQ8IYY4 767 aaKnown RBP12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 C7orf61Q8IZ16 206 aa12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 WRNIP1Q96S55 665 aa12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 CRISPLD2Q9H0B8 497 aa12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 ZMYND8Q9ULU4 1186 aaPredicted RBP12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 AOX1Q06278 1338 aa12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 DNAH12Q6ZR08 3092 aa12.05□□□□□ -0.48
HLA-DOA-202ENST00000374813 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
HLA-DOA-202ENST00000374813 INHAP05111 366 aa12.04□□□□□ -0.48
HLA-DOA-202ENST00000374813 NEXNQ0ZGT2 675 aa12.04□□□□□ -0.48
HLA-DOA-202ENST00000374813 ZKSCAN4Q969J2 545 aaPredicted RBP12.04□□□□□ -0.48
HLA-DOA-202ENST00000374813 PARK7Q99497 189 aaKnown RBP12.04□□□□□ -0.48
HLA-DOA-202ENST00000374813 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
HLA-DOA-202ENST00000374813 TTF2Q9UNY4 1162 aaKnown RBP12.04□□□□□ -0.48
HLA-DOA-202ENST00000374813 COL9A1P20849 921 aa12.03□□□□□ -0.48
HLA-DOA-202ENST00000374813 FLT3LGP49771 235 aa12.03□□□□□ -0.48
HLA-DOA-202ENST00000374813 IRF5Q13568 498 aa12.03□□□□□ -0.48
HLA-DOA-202ENST00000374813 NEUROD2Q15784 382 aa12.03□□□□□ -0.48
HLA-DOA-202ENST00000374813 DCAF15Q66K64 600 aa12.03□□□□□ -0.48
HLA-DOA-202ENST00000374813 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
HLA-DOA-202ENST00000374813 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.03□□□□□ -0.48
HLA-DOA-202ENST00000374813 GABRQQ9UN88 632 aa12.03□□□□□ -0.48
HLA-DOA-202ENST00000374813 MGAMO43451 1857 aa12.03□□□□□ -0.48
HLA-DOA-202ENST00000374813 ALPK3Q96L96 1907 aa12.03□□□□□ -0.48
HLA-DOA-202ENST00000374813 BCRP11274 1271 aa12.02□□□□□ -0.49
HLA-DOA-202ENST00000374813 MFSD14BQ5SR56 506 aa12.02□□□□□ -0.49
HLA-DOA-202ENST00000374813 GUCD1Q96NT3 240 aa12.02□□□□□ -0.49
HLA-DOA-202ENST00000374813 KCNH4Q9UQ05 1017 aa12.02□□□□□ -0.49
HLA-DOA-202ENST00000374813 MAP3K2Q9Y2U5 619 aa12.02□□□□□ -0.49
HLA-DOA-202ENST00000374813 IRS2Q9Y4H2 1338 aa12.02□□□□□ -0.49
HLA-DOA-202ENST00000374813 CDH23Q9H251 3354 aa12.02□□□□□ -0.49
HLA-DOA-202ENST00000374813 H7C1W4 665 aa12.01□□□□□ -0.49
HLA-DOA-202ENST00000374813 TAF5LO75529 589 aa12.01□□□□□ -0.49
HLA-DOA-202ENST00000374813 IGKV5-2P06315 115 aa12.01□□□□□ -0.49
HLA-DOA-202ENST00000374813 ELNP15502 786 aa12.01□□□□□ -0.49
HLA-DOA-202ENST00000374813 SYN1P17600 705 aa12.01□□□□□ -0.49
HLA-DOA-202ENST00000374813 KSR2Q6VAB6 950 aa12.01□□□□□ -0.49
HLA-DOA-202ENST00000374813 FAM83AQ86UY5 434 aa12.01□□□□□ -0.49
HLA-DOA-202ENST00000374813 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
HLA-DOA-202ENST00000374813 TMOD2Q9NZR1 351 aa12.01□□□□□ -0.49
HLA-DOA-202ENST00000374813 JAG2Q9Y219 1238 aa12.01□□□□□ -0.49
HLA-DOA-202ENST00000374813 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
HLA-DOA-202ENST00000374813 TNPO2O14787 897 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms