RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 RUFY4Q6ZNE9 571 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 TRIM7Q9C029 511 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 STK38LQ9Y2H1 464 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 NFE2L3Q9Y4A8 694 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 WDR62O43379 1518 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 COL17A1Q9UMD9 1497 aaPredicted RBP11.54□□□□□ -0.56
CD28-202ENST00000374481 GOLGA8BA8MQT2 603 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 SGSM2O43147 1006 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 IFT20Q8IY31 132 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 C8orf58Q8NAV2 365 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 MIS18AQ9NYP9 233 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 STIM2Q9P246 746 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 KDM6BO15054 1643 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 A0A087WWV3 80 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 MACROD2A1Z1Q3 448 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 SEPT6Q14141 434 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 C6orf163Q5TEZ5 329 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 PPP1R42Q7Z4L9 355 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 CCDC8Q9H0W5 538 aaPredicted RBP11.54□□□□□ -0.56
CD28-202ENST00000374481 ZNF202O95125 648 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 CRYMQ14894 314 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 SLMAPQ14BN4 828 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 RASIP1Q5U651 963 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 SPATA24Q86W54 205 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 RNF10Q8N5U6 811 aaKnown RBP11.54□□□□□ -0.56
CD28-202ENST00000374481 PTPDC1A2A3K4 754 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 AIMP1Q12904 312 aaKnown RBP11.53□□□□□ -0.56
CD28-202ENST00000374481 ME3Q16798 604 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 LMOD2Q6P5Q4 547 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 SLF1Q9BQI6 1058 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 PTPRGP23470 1445 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 PRAG1Q86YV5 1406 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 KCNA4P22459 653 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 TRAF1Q13077 416 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 CYP26C1Q6V0L0 522 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 MCM10Q7L590 875 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 UBLCP1Q8WVY7 318 aaPredicted RBP11.53□□□□□ -0.56
CD28-202ENST00000374481 CCDC97Q96F63 343 aaPredicted RBP11.53□□□□□ -0.56
CD28-202ENST00000374481 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
CD28-202ENST00000374481 CCDC42Q96M95 316 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 SPAG5Q96R06 1193 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
CD28-202ENST00000374481 TBC1D8O95759 1140 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 GOLGA8FQ08AF8 430 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 GOLGA8DPQ0D2H9 430 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 NYAP1Q6ZVC0 841 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 WASF1Q92558 559 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 ARHGEF11O15085 1522 aa11.53□□□□□ -0.56
CD28-202ENST00000374481 MYO1BO43795 1136 aa11.52□□□□□ -0.56
CD28-202ENST00000374481 ZMYND10O75800 440 aa11.52□□□□□ -0.56
CD28-202ENST00000374481 MTIF2P46199 727 aaKnown RBP11.52□□□□□ -0.56
CD28-202ENST00000374481 SCRN1Q12765 414 aa11.52□□□□□ -0.56
CD28-202ENST00000374481 MYO1EQ12965 1108 aa11.52□□□□□ -0.56
CD28-202ENST00000374481 PAK2Q13177 524 aa11.52□□□□□ -0.56
CD28-202ENST00000374481 ZNF513Q8N8E2 541 aaPredicted RBP11.52□□□□□ -0.56
CD28-202ENST00000374481 EID1Q9Y6B2 187 aa11.52□□□□□ -0.56
CD28-202ENST00000374481 ATP8B2P98198 1209 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 SETDB1Q15047 1291 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 NBPF20Q3BBV1 942 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 RIC3Q7Z5B4 369 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 SLC35F6Q8N357 371 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 SMIM23A6NLE4 172 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 AFMP43652 599 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 PDCLQ13371 301 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 HINFPQ9BQA5 517 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 DNMT1P26358 1616 aaKnown RBP11.52□□□□□ -0.57
CD28-202ENST00000374481 KDM5BQ9UGL1 1544 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 HGSO14964 777 aaPredicted RBP11.52□□□□□ -0.57
CD28-202ENST00000374481 NBPF9Q3BBW0 867 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 AIDAQ96BJ3 306 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 TCHPQ9BT92 498 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 BATF3Q9NR55 127 aa11.52□□□□□ -0.57
CD28-202ENST00000374481 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.57
CD28-202ENST00000374481 SLC30A9Q6PML9 568 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 FAM114A2Q9NRY5 505 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 NOP53Q9NZM5 478 aaKnown RBP11.51□□□□□ -0.57
CD28-202ENST00000374481 PPIP5K1Q6PFW1 1433 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 CREB3O43889 395 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 GIGYF1O75420 1035 aaPredicted RBP11.51□□□□□ -0.57
CD28-202ENST00000374481 DAAM2Q86T65 1068 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 PARP9Q8IXQ6 854 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 TTC14Q96N46 770 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 OSBPL5Q9H0X9 879 aaPredicted RBP11.51□□□□□ -0.57
CD28-202ENST00000374481 L2HGDHQ9H9P8 463 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 PLEKHG2Q9H7P9 1386 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 SH3BGRP55822 239 aaPredicted RBP11.51□□□□□ -0.57
CD28-202ENST00000374481 MAP7Q14244 749 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
CD28-202ENST00000374481 INTS8Q75QN2 995 aaKnown RBP11.51□□□□□ -0.57
CD28-202ENST00000374481 AMOTL1Q8IY63 956 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 FBXO41Q8TF61 875 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 CDK5RAP3Q96JB5 506 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 VCX3BQ9H321 246 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 VCX3AQ9NNX9 186 aa11.51□□□□□ -0.57
CD28-202ENST00000374481 KRT9P35527 623 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 CCT6AP40227 531 aaKnown RBP11.5□□□□□ -0.57
CD28-202ENST00000374481 TNNC1P63316 161 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms