RNA–Protein interactions for RNA: ENST00000374255.6

PTBP3-204, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PTBP3, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-204ENST00000374255 ALG1Q9BT22 464 aa9.14□□□□□ -0.95
PTBP3-204ENST00000374255 CCDC39Q9UFE4 941 aa9.14□□□□□ -0.95
PTBP3-204ENST00000374255 RTCBQ9Y3I0 505 aaKnown RBP9.14□□□□□ -0.95
PTBP3-204ENST00000374255 A0A1B0GVL5 298 aa9.14□□□□□ -0.95
PTBP3-204ENST00000374255 IARSP41252 1262 aaKnown RBP9.14□□□□□ -0.95
PTBP3-204ENST00000374255 MED23Q9ULK4 1368 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 NR1I2O75469 434 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 LETM1O95202 739 aaPredicted RBP9.13□□□□□ -0.95
PTBP3-204ENST00000374255 ST3GAL1Q11201 340 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 FILIP1Q7Z7B0 1213 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 DZIP1Q86YF9 867 aaKnown RBP9.13□□□□□ -0.95
PTBP3-204ENST00000374255 C17orf53Q8N3J3 647 aaPredicted RBP9.13□□□□□ -0.95
PTBP3-204ENST00000374255 GPR108Q9NPR9 543 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 RIPOR2Q9Y4F9 1068 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 ZNF165P49910 485 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 HSP90AA4PQ58FG1 418 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 NAA16Q6N069 864 aaPredicted RBP9.13□□□□□ -0.95
PTBP3-204ENST00000374255 TRIM22Q8IYM9 498 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 PDILTQ8N807 584 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 USP28Q96RU2 1077 aa9.13□□□□□ -0.95
PTBP3-204ENST00000374255 CYP2D7A0A087X1C5 515 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 PARP10Q53GL7 1025 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 NSUN7Q8NE18 718 aaKnown RBP9.12□□□□□ -0.95
PTBP3-204ENST00000374255 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 GPR101Q96P66 508 aaPredicted RBP9.12□□□□□ -0.95
PTBP3-204ENST00000374255 NOL10Q9BSC4 688 aaKnown RBP9.12□□□□□ -0.95
PTBP3-204ENST00000374255 CDCA7Q9BWT1 371 aaPredicted RBP9.12□□□□□ -0.95
PTBP3-204ENST00000374255 COL15A1P39059 1388 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 F8W031 263 aaPredicted RBP9.12□□□□□ -0.95
PTBP3-204ENST00000374255 PKNOX2Q96KN3 472 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 AATFQ9NY61 560 aaKnown RBP eCLIP9.12□□□□□ -0.953e-8■□□□□ 10.6
PTBP3-204ENST00000374255 ANGEL1Q9UNK9 670 aaKnown RBP9.12□□□□□ -0.95
PTBP3-204ENST00000374255 GOLGA6L6A8MZA4 724 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 ADD2P35612 726 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 TYRO3Q06418 890 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 WTAPQ15007 396 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 SPECC1Q5M775 1068 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 LCORLQ8N3X6 602 aa9.12□□□□□ -0.95
PTBP3-204ENST00000374255 MAGEB6P1A0A0J9YX57 407 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 C6orf229H3BNL8 230 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 EIF5P55010 431 aaKnown RBP9.11□□□□□ -0.95
PTBP3-204ENST00000374255 TRIM28Q13263 835 aaKnown RBP9.11□□□□□ -0.95
PTBP3-204ENST00000374255 CLEC17AQ6ZS10 378 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 MROH5Q6ZUA9 1318 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 IFNL3Q8IZI9 196 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 CELF1Q92879 486 aaKnown RBP9.11□□□□□ -0.95
PTBP3-204ENST00000374255 ZMYND15Q9H091 742 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 ZSCAN16Q9H4T2 348 aaPredicted RBP9.11□□□□□ -0.95
PTBP3-204ENST00000374255 SPATA31A1Q5TZJ5 1347 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 PFKFB2O60825 505 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 USP5P45974 858 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 TBC1D10CQ8IV04 446 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 FAM13BQ9NYF5 915 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 KIF1AQ12756 1690 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 CDKL5O76039 1030 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 SMC2O95347 1197 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 CSF1RP07333 972 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 DYNLL1P63167 89 aaKnown RBP9.11□□□□□ -0.95
PTBP3-204ENST00000374255 ATP2B2Q01814 1243 aa9.11□□□□□ -0.95
PTBP3-204ENST00000374255 SAMD1Q6SPF0 538 aaPredicted RBP9.11□□□□□ -0.95
PTBP3-204ENST00000374255 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
PTBP3-204ENST00000374255 ERVV-1B6SEH8 477 aa9.1□□□□□ -0.95
PTBP3-204ENST00000374255 TBC1D9BQ66K14 1250 aa9.1□□□□□ -0.95
PTBP3-204ENST00000374255 INTS5Q6P9B9 1019 aaKnown RBP9.1□□□□□ -0.95
PTBP3-204ENST00000374255 KCNJ14Q9UNX9 436 aa9.1□□□□□ -0.95
PTBP3-204ENST00000374255 CACNA1FO60840 1977 aa9.1□□□□□ -0.95
PTBP3-204ENST00000374255 RPS8P62241 208 aaKnown RBP9.1□□□□□ -0.95
PTBP3-204ENST00000374255 SSRP1Q08945 709 aaKnown RBP9.1□□□□□ -0.95
PTBP3-204ENST00000374255 GLIPR1L2Q4G1C9 344 aa9.1□□□□□ -0.95
PTBP3-204ENST00000374255 SENP2Q9HC62 589 aa9.1□□□□□ -0.95
PTBP3-204ENST00000374255 DDX19AQ9NUU7 478 aaKnown RBP9.1□□□□□ -0.95
PTBP3-204ENST00000374255 TSPY2A6NKD2 308 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 TMX4Q9H1E5 349 aaPredicted RBP9.09□□□□□ -0.95
PTBP3-204ENST00000374255 STX8Q9UNK0 236 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 CLCN1P35523 988 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 FAM47AQ5JRC9 791 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 TRAPPC3LQ5T215 181 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 FAM196AQ6ZSG2 479 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 IQCA1Q86XH1 822 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 AMOTL1Q8IY63 956 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 MKNK2Q9HBH9 465 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 MCM9Q9NXL9 1143 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 LRRC37A3O60309 1634 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 ZNF142P52746 1687 aaPredicted RBP9.09□□□□□ -0.95
PTBP3-204ENST00000374255 UBE2Q2LH0YL09 131 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 RIMBP2O15034 1052 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 CAMTA2O94983 1202 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 RTN1Q16799 776 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 C3orf67Q6ZVT6 689 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 CYB5R4Q7L1T6 521 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 ZNF34Q8IZ26 560 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 LINC00116Q8NCU8 138 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 ZSWIM5Q9P217 1185 aa9.09□□□□□ -0.95
PTBP3-204ENST00000374255 USP17L12C9JPN9 530 aa9.08□□□□□ -0.96
PTBP3-204ENST00000374255 USP17L21D6R901 530 aa9.08□□□□□ -0.96
PTBP3-204ENST00000374255 PES1O00541 588 aaKnown RBP9.08□□□□□ -0.96
PTBP3-204ENST00000374255 SPTLC2O15270 562 aa9.08□□□□□ -0.96
PTBP3-204ENST00000374255 CNBD1Q8NA66 436 aa9.08□□□□□ -0.96
PTBP3-204ENST00000374255 CLIC4Q9Y696 253 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms