RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 TTF2Q9UNY4 1162 aaKnown RBP18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 TLR2O60603 784 aa18.85■□□□□ 0.61
CDKN1A-202ENST00000373711 CAP1Q01518 475 aa18.85■□□□□ 0.61
CDKN1A-202ENST00000373711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.85■□□□□ 0.616e-7■■□□□ 12.7
CDKN1A-202ENST00000373711 JAG2Q9Y219 1238 aa18.85■□□□□ 0.61
CDKN1A-202ENST00000373711 SPDYE5A6NIY4 337 aa18.84■□□□□ 0.61
CDKN1A-202ENST00000373711 SNAP23O00161 211 aa18.84■□□□□ 0.61
CDKN1A-202ENST00000373711 LACTBP83111 547 aaPredicted RBP18.84■□□□□ 0.61
CDKN1A-202ENST00000373711 CCDC57Q2TAC2 916 aa18.84■□□□□ 0.61
CDKN1A-202ENST00000373711 DIEXFQ68CQ4 756 aaKnown RBP18.84■□□□□ 0.61
CDKN1A-202ENST00000373711 FAM43AQ8N2R8 423 aa18.84■□□□□ 0.61
CDKN1A-202ENST00000373711 TDRD3Q9H7E2 651 aaKnown RBP18.84■□□□□ 0.61
CDKN1A-202ENST00000373711 CNNM1Q9NRU3 951 aa18.84■□□□□ 0.61
CDKN1A-202ENST00000373711 ZSWIM8A7E2V4 1837 aa18.84■□□□□ 0.61
CDKN1A-202ENST00000373711 AOX1Q06278 1338 aa18.83■□□□□ 0.61
CDKN1A-202ENST00000373711 MYCP01106 439 aaPredicted RBP18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 CHRDL2Q6WN34 429 aa18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 LDHAL6AQ6ZMR3 332 aa18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 G2E3Q7L622 706 aa18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 ERO1BQ86YB8 467 aa18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 DZIP1LQ8IYY4 767 aaKnown RBP18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 SH3TC2Q8TF17 1288 aa18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 DPF3Q92784 378 aa18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 TEPSINQ96N21 525 aa18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 HTATIP2Q9BUP3 242 aa18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 TMOD2Q9NZR1 351 aa18.83■□□□□ 0.6
CDKN1A-202ENST00000373711 TCP10L2B9ZVM9 353 aa18.82■□□□□ 0.6
CDKN1A-202ENST00000373711 HOXD10P28358 340 aa18.82■□□□□ 0.6
CDKN1A-202ENST00000373711 SNAPC2Q13487 334 aa18.82■□□□□ 0.6
CDKN1A-202ENST00000373711 CNKSR2Q8WXI2 1034 aa18.82■□□□□ 0.6
CDKN1A-202ENST00000373711 TSR2Q969E8 191 aaKnown RBP18.82■□□□□ 0.6
CDKN1A-202ENST00000373711 PLIN1O60240 522 aa18.81■□□□□ 0.6
CDKN1A-202ENST00000373711 HIBADHP31937 336 aaKnown RBP18.81■□□□□ 0.6
CDKN1A-202ENST00000373711 CRKP46108 304 aa18.81■□□□□ 0.6
CDKN1A-202ENST00000373711 UBE4AQ14139 1066 aa18.81■□□□□ 0.6
CDKN1A-202ENST00000373711 TDRD7Q8NHU6 1098 aaKnown RBP18.81■□□□□ 0.6
CDKN1A-202ENST00000373711 TMEM39BQ9GZU3 492 aa18.81■□□□□ 0.6
CDKN1A-202ENST00000373711 FOXO4P98177 505 aa18.79■□□□□ 0.6
CDKN1A-202ENST00000373711 HDLBPQ00341 1268 aaKnown RBP18.79■□□□□ 0.6
CDKN1A-202ENST00000373711 PPIL2Q13356 520 aa18.79■□□□□ 0.6
CDKN1A-202ENST00000373711 DCAF15Q66K64 600 aa18.79■□□□□ 0.6
CDKN1A-202ENST00000373711 VPS37DQ86XT2 251 aa18.79■□□□□ 0.6
CDKN1A-202ENST00000373711 RAET1EQ8TD07 263 aa18.79■□□□□ 0.6
CDKN1A-202ENST00000373711 TBC1D22AQ8WUA7 517 aa18.79■□□□□ 0.6
CDKN1A-202ENST00000373711 WRNIP1Q96S55 665 aa18.79■□□□□ 0.6
CDKN1A-202ENST00000373711 NR2E3Q9Y5X4 410 aa18.79■□□□□ 0.6
CDKN1A-202ENST00000373711 AK9Q5TCS8 1911 aa18.78■□□□□ 0.6
CDKN1A-202ENST00000373711 BTBD19C9JJ37 291 aa18.78■□□□□ 0.6
CDKN1A-202ENST00000373711 CCDC27Q2M243 656 aa18.78■□□□□ 0.6
CDKN1A-202ENST00000373711 LMBR1LQ6UX01 489 aa18.78■□□□□ 0.6
CDKN1A-202ENST00000373711 ARHGAP39Q9C0H5 1083 aa18.78■□□□□ 0.6
CDKN1A-202ENST00000373711 SNCAIPQ9Y6H5 919 aa18.78■□□□□ 0.6
CDKN1A-202ENST00000373711 MGAMO43451 1857 aa18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 MAST3O60307 1309 aa18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 UBXN2AP68543 259 aa18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 FAM83AQ86UY5 434 aa18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 CDAN1Q8IWY9 1227 aa18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 TEKT1Q969V4 418 aa18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 TRIM47Q96LD4 638 aa18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 PRKRIP1Q9H875 184 aaPredicted RBP18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 RBM27Q9P2N5 1060 aaKnown RBP18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 SRRDQ9UH36 339 aa18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 SZT2Q5T011 3432 aa18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 RPAP1Q9BWH6 1393 aaPredicted RBP18.77■□□□□ 0.6
CDKN1A-202ENST00000373711 IL16Q14005 1332 aa18.76■□□□□ 0.59
CDKN1A-202ENST00000373711 MYH13Q9UKX3 1938 aa18.76■□□□□ 0.59
CDKN1A-202ENST00000373711 IRF6O14896 467 aa18.76■□□□□ 0.59
CDKN1A-202ENST00000373711 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
CDKN1A-202ENST00000373711 GRK4P32298 578 aa18.76■□□□□ 0.59
CDKN1A-202ENST00000373711 GYG1P46976 350 aa18.76■□□□□ 0.59
CDKN1A-202ENST00000373711 PPATQ06203 517 aa18.76■□□□□ 0.59
CDKN1A-202ENST00000373711 FMNL1O95466 1100 aaPredicted RBP18.75■□□□□ 0.59
CDKN1A-202ENST00000373711 GJB1P08034 283 aa18.75■□□□□ 0.59
CDKN1A-202ENST00000373711 CAPN2P17655 700 aa18.75■□□□□ 0.59
CDKN1A-202ENST00000373711 PSMC4P43686 418 aa18.75■□□□□ 0.59
CDKN1A-202ENST00000373711 GJA8P48165 433 aa18.75■□□□□ 0.59
CDKN1A-202ENST00000373711 FKBP1CQ5VVH2 108 aa18.75■□□□□ 0.59
CDKN1A-202ENST00000373711 C17orf99Q6UX52 265 aa18.75■□□□□ 0.59
CDKN1A-202ENST00000373711 SHISA4Q96DD7 197 aa18.75■□□□□ 0.59
CDKN1A-202ENST00000373711 ZNF594Q96JF6 807 aaPredicted RBP18.75■□□□□ 0.59
CDKN1A-202ENST00000373711 MROH5Q6ZUA9 1318 aa18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 MYPNQ86TC9 1320 aa18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 A0A1W2PPC1 479 aa18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 GRM8O00222 908 aa18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 MTFR1Q15390 333 aa18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 CAVIN4Q5BKX8 364 aa18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 ANKRD23Q86SG2 305 aa18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 FAM84BQ96KN1 310 aaPredicted RBP18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 ZNF341Q9BYN7 854 aa18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 C9orf78Q9NZ63 289 aaPredicted RBP18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 BIN2Q9UBW5 565 aaPredicted RBP18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 RIPOR2Q9Y4F9 1068 aa18.74■□□□□ 0.59
CDKN1A-202ENST00000373711 BEND3Q5T5X7 828 aa18.73■□□□□ 0.59
CDKN1A-202ENST00000373711 WWC1Q8IX03 1113 aa18.73■□□□□ 0.59
CDKN1A-202ENST00000373711 SLC17A8Q8NDX2 589 aa18.73■□□□□ 0.59
CDKN1A-202ENST00000373711 ZKSCAN4Q969J2 545 aaPredicted RBP18.73■□□□□ 0.59
CDKN1A-202ENST00000373711 ZDHHC15Q96MV8 337 aa18.73■□□□□ 0.59
CDKN1A-202ENST00000373711 MRIQ9BWK5 157 aa18.73■□□□□ 0.59
CDKN1A-202ENST00000373711 RNF208Q9H0X6 261 aa18.73■□□□□ 0.59
CDKN1A-202ENST00000373711 SUGT1Q9Y2Z0 365 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms