RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 CRKP46108 304 aa16.51■□□□□ 0.23
TRAPPC3-201ENST00000373159 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
TRAPPC3-201ENST00000373159 HDLBPQ00341 1268 aaKnown RBP16.51■□□□□ 0.23
TRAPPC3-201ENST00000373159 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC3-201ENST00000373159 CD99L2Q8TCZ2 262 aa16.51■□□□□ 0.23
TRAPPC3-201ENST00000373159 MRIQ9BWK5 157 aa16.51■□□□□ 0.23
TRAPPC3-201ENST00000373159 EFCC1Q9HA90 598 aa16.51■□□□□ 0.23
TRAPPC3-201ENST00000373159 TCP10L2B9ZVM9 353 aa16.5■□□□□ 0.23
TRAPPC3-201ENST00000373159 TNNI2P48788 182 aa16.5■□□□□ 0.23
TRAPPC3-201ENST00000373159 RABL6Q3YEC7 729 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC3-201ENST00000373159 CDAN1Q8IWY9 1227 aa16.5■□□□□ 0.23
TRAPPC3-201ENST00000373159 TBC1D22AQ8WUA7 517 aa16.5■□□□□ 0.23
TRAPPC3-201ENST00000373159 ARMC5Q96C12 935 aa16.5■□□□□ 0.23
TRAPPC3-201ENST00000373159 TMEM39BQ9GZU3 492 aa16.5■□□□□ 0.23
TRAPPC3-201ENST00000373159 HTTP42858 3142 aa16.5■□□□□ 0.23
TRAPPC3-201ENST00000373159 POTEFA5A3E0 1075 aa16.49■□□□□ 0.23
TRAPPC3-201ENST00000373159 GRIK5Q16478 980 aa16.49■□□□□ 0.23
TRAPPC3-201ENST00000373159 VPS37DQ86XT2 251 aa16.49■□□□□ 0.23
TRAPPC3-201ENST00000373159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRAPPC3-201ENST00000373159 BRI3BPQ8WY22 251 aa16.49■□□□□ 0.23
TRAPPC3-201ENST00000373159 GTF2A2P52657 109 aa16.48■□□□□ 0.23
TRAPPC3-201ENST00000373159 VGLL4Q14135 290 aa16.48■□□□□ 0.23
TRAPPC3-201ENST00000373159 ARHGEF6Q15052 776 aa16.48■□□□□ 0.23
TRAPPC3-201ENST00000373159 CAVIN4Q5BKX8 364 aa16.48■□□□□ 0.23
TRAPPC3-201ENST00000373159 GCC1Q96CN9 775 aa16.48■□□□□ 0.23
TRAPPC3-201ENST00000373159 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
TRAPPC3-201ENST00000373159 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 PDE8BO95263 885 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 CAP1Q01518 475 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 CCL15Q16663 113 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 LRRC24Q50LG9 513 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 VGLL2Q8N8G2 317 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 ZFYVE28Q9HCC9 887 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 IQSEC3Q9UPP2 1182 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 CSADQ9Y600 493 aa16.47■□□□□ 0.23
TRAPPC3-201ENST00000373159 A0A1B0GUL6 1792 aa16.46■□□□□ 0.23
TRAPPC3-201ENST00000373159 FRAT2O75474 233 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC3-201ENST00000373159 CHAF1AQ13111 956 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC3-201ENST00000373159 METTL24Q5JXM2 366 aa16.46■□□□□ 0.23
TRAPPC3-201ENST00000373159 FKBP1CQ5VVH2 108 aa16.46■□□□□ 0.23
TRAPPC3-201ENST00000373159 TEKT1Q969V4 418 aa16.46■□□□□ 0.23
TRAPPC3-201ENST00000373159 ZDHHC15Q96MV8 337 aa16.46■□□□□ 0.23
TRAPPC3-201ENST00000373159 SUGT1Q9Y2Z0 365 aa16.46■□□□□ 0.23
TRAPPC3-201ENST00000373159 MKI67P46013 3256 aaKnown RBP16.45■□□□□ 0.22
TRAPPC3-201ENST00000373159 SPDYE5A6NIY4 337 aa16.45■□□□□ 0.22
TRAPPC3-201ENST00000373159 BCAMP50895 628 aa16.45■□□□□ 0.22
TRAPPC3-201ENST00000373159 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-201ENST00000373159 FAM83AQ86UY5 434 aa16.45■□□□□ 0.22
TRAPPC3-201ENST00000373159 FAM9BQ8IZU0 186 aa16.45■□□□□ 0.22
TRAPPC3-201ENST00000373159 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
TRAPPC3-201ENST00000373159 MRPL50Q8N5N7 158 aaKnown RBP16.45■□□□□ 0.22
TRAPPC3-201ENST00000373159 KIF16BQ96L93 1317 aa16.45■□□□□ 0.22
TRAPPC3-201ENST00000373159 LAMB1P07942 1786 aa16.44■□□□□ 0.22
TRAPPC3-201ENST00000373159 APOBEC3HQ6NTF7 200 aaKnown RBP16.44■□□□□ 0.22
TRAPPC3-201ENST00000373159 HHIPL2Q6UWX4 724 aa16.44■□□□□ 0.22
TRAPPC3-201ENST00000373159 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
TRAPPC3-201ENST00000373159 OTUD5Q96G74 571 aa16.44■□□□□ 0.22
TRAPPC3-201ENST00000373159 ZNF333Q96JL9 665 aa16.44■□□□□ 0.22
TRAPPC3-201ENST00000373159 ZCCHC17Q9NP64 241 aaKnown RBP16.44■□□□□ 0.22
TRAPPC3-201ENST00000373159 CENPFP49454 3210 aa16.44■□□□□ 0.22
TRAPPC3-201ENST00000373159 ZNF521Q96K83 1311 aa16.44■□□□□ 0.22
TRAPPC3-201ENST00000373159 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 CETPP11597 493 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 EN2P19622 333 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 FGFR2P21802 821 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 CACNB3P54284 484 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 NBPF11Q86T75 865 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 TMEM106CQ9BVX2 250 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 USP44Q9H0E7 712 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 TMOD2Q9NZR1 351 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 SNCAIPQ9Y6H5 919 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 MAST3O60307 1309 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 PTPRCP08575 1304 aa16.43■□□□□ 0.22
TRAPPC3-201ENST00000373159 TLR2O60603 784 aa16.42■□□□□ 0.22
TRAPPC3-201ENST00000373159 IFIT1P09914 478 aaKnown RBP16.42■□□□□ 0.22
TRAPPC3-201ENST00000373159 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
TRAPPC3-201ENST00000373159 KLHDC4Q8TBB5 520 aa16.42■□□□□ 0.22
TRAPPC3-201ENST00000373159 IRF6O14896 467 aa16.41■□□□□ 0.22
TRAPPC3-201ENST00000373159 SNAPC2Q13487 334 aa16.41■□□□□ 0.22
TRAPPC3-201ENST00000373159 DCAF15Q66K64 600 aa16.41■□□□□ 0.22
TRAPPC3-201ENST00000373159 ZKSCAN4Q969J2 545 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC3-201ENST00000373159 WRNIP1Q96S55 665 aa16.41■□□□□ 0.22
TRAPPC3-201ENST00000373159 PTCH2Q9Y6C5 1203 aa16.41■□□□□ 0.22
TRAPPC3-201ENST00000373159 BTBD19C9JJ37 291 aa16.4■□□□□ 0.22
TRAPPC3-201ENST00000373159 EYA2O00167 538 aa16.4■□□□□ 0.22
TRAPPC3-201ENST00000373159 PPIL2Q13356 520 aa16.4■□□□□ 0.22
TRAPPC3-201ENST00000373159 SLC9C1Q4G0N8 1177 aa16.4■□□□□ 0.22
TRAPPC3-201ENST00000373159 HABP4Q5JVS0 413 aaKnown RBP16.4■□□□□ 0.22
TRAPPC3-201ENST00000373159 WDR66Q8TBY9 1149 aa16.4■□□□□ 0.22
TRAPPC3-201ENST00000373159 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-201ENST00000373159 GNRH1P01148 92 aa16.39■□□□□ 0.21
TRAPPC3-201ENST00000373159 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC3-201ENST00000373159 PPATQ06203 517 aa16.39■□□□□ 0.21
TRAPPC3-201ENST00000373159 FAM151AQ8WW52 585 aa16.39■□□□□ 0.21
TRAPPC3-201ENST00000373159 SSH1Q8WYL5 1049 aa16.39■□□□□ 0.21
TRAPPC3-201ENST00000373159 LPIN2Q92539 896 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 1770 ms