RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 FAM81AQ8TBF8 368 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 CAPS2Q9BXY5 557 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 IQCGQ9H095 443 aaKnown RBP12.12□□□□□ -0.47
TRERF1-203ENST00000372917 CLSTN2Q9H4D0 955 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
TRERF1-203ENST00000372917 PLCH2O75038 1416 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 LRRIQ3A6PVS8 624 aaPredicted RBP12.11□□□□□ -0.47
TRERF1-203ENST00000372917 MEFVO15553 781 aaPredicted RBP12.11□□□□□ -0.47
TRERF1-203ENST00000372917 ACBD5Q5T8D3 534 aaPredicted RBP12.11□□□□□ -0.47
TRERF1-203ENST00000372917 OR8K1Q8NGG5 319 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRERF1-203ENST00000372917 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 ZSCAN12O43309 604 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 BUB1BO60566 1050 aaPredicted RBP12.11□□□□□ -0.47
TRERF1-203ENST00000372917 ATP6V1G1O75348 118 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 CSB-PGBD3P0DP91 1061 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 MAGEA10P43363 369 aaPredicted RBP12.11□□□□□ -0.47
TRERF1-203ENST00000372917 CD151P48509 253 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 PAPOLAP51003 745 aaKnown RBP12.11□□□□□ -0.47
TRERF1-203ENST00000372917 RBM12BQ8IXT5 1001 aaKnown RBP12.11□□□□□ -0.47
TRERF1-203ENST00000372917 ARHGAP45Q92619 1136 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 PHACTR1Q9C0D0 580 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 BATF3Q9NR55 127 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 MYOM2P54296 1465 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 NR1I2O75469 434 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 ZNF202O95125 648 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 SPATA32Q96LK8 384 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 IFNKQ9P0W0 207 aa12.11□□□□□ -0.47
TRERF1-203ENST00000372917 CLTCL1P53675 1640 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 EIF4E1BA6NMX2 242 aaKnown RBP12.1□□□□□ -0.47
TRERF1-203ENST00000372917 SMTNP53814 917 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 MYO1EQ12965 1108 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 IQCB1Q15051 598 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 ENOX2Q16206 610 aaKnown RBP12.1□□□□□ -0.47
TRERF1-203ENST00000372917 HNRNPLLQ8WVV9 542 aaKnown RBP12.1□□□□□ -0.47
TRERF1-203ENST00000372917 TCP11Q8WWU5 503 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 TRAPPC8Q9Y2L5 1435 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 GOLGA6L7A0A1B0GV03 622 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 SMIM24O75264 130 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
TRERF1-203ENST00000372917 TWISTNBQ3B726 338 aaPredicted RBP12.1□□□□□ -0.47
TRERF1-203ENST00000372917 MICALCLQ6ZW33 695 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 TSC22D3Q99576 134 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 PAPOLBQ9NRJ5 636 aaKnown RBP12.1□□□□□ -0.47
TRERF1-203ENST00000372917 ATAD2Q6PL18 1390 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
TRERF1-203ENST00000372917 GNAT1P11488 350 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 SLC8A1P32418 973 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 VSNL1P62760 191 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 ACCSLQ4AC99 568 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 TLDC1Q6P9B6 456 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 CCDC50Q8IVM0 306 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 SYCP3Q8IZU3 236 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 SPAG5Q96R06 1193 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 NOS1P29475 1434 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 KIAA1210Q9ULL0 1709 aa12.1□□□□□ -0.47
TRERF1-203ENST00000372917 GJB2P29033 226 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 ANKZF1Q9H8Y5 726 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 ATP2C2O75185 946 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 KARSQ15046 597 aaKnown RBP12.09□□□□□ -0.47
TRERF1-203ENST00000372917 STX1AQ16623 288 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 CCDC83Q8IWF9 413 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 NSMCE1Q8WV22 266 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 XPO4Q9C0E2 1151 aaKnown RBP12.09□□□□□ -0.47
TRERF1-203ENST00000372917 CABP1Q9NZU7 370 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 IMPACTQ9P2X3 320 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 PHF8Q9UPP1 1060 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 KCNA4P22459 653 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 DCTN1Q14203 1278 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 CWF19L1Q69YN2 538 aaKnown RBP12.09□□□□□ -0.47
TRERF1-203ENST00000372917 PRPF40BQ6NWY9 871 aaKnown RBP12.09□□□□□ -0.47
TRERF1-203ENST00000372917 CCDC13Q8IYE1 715 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 LZTS2Q9BRK4 669 aa12.09□□□□□ -0.47
TRERF1-203ENST00000372917 OSBPL5Q9H0X9 879 aaPredicted RBP12.09□□□□□ -0.47
TRERF1-203ENST00000372917 C14orf93Q9H972 538 aaKnown RBP12.09□□□□□ -0.47
TRERF1-203ENST00000372917 HOOK1Q9UJC3 728 aaKnown RBP12.09□□□□□ -0.47
TRERF1-203ENST00000372917 GOLGA6L10A6NI86 522 aa12.08□□□□□ -0.47
TRERF1-203ENST00000372917 AKAP17AQ02040 695 aaKnown RBP12.08□□□□□ -0.47
TRERF1-203ENST00000372917 OSBPL9Q96SU4 736 aa12.08□□□□□ -0.47
TRERF1-203ENST00000372917 ZNF189O75820 626 aaPredicted RBP12.08□□□□□ -0.48
TRERF1-203ENST00000372917 GOLGA8FQ08AF8 430 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 GOLGA8DPQ0D2H9 430 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 HSP90AB2PQ58FF8 381 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 BAIAP2L1Q9UHR4 511 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 TRPC6Q9Y210 931 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 AHCYL1O43865 530 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 NAT1P18440 290 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 CYB5D1Q6P9G0 228 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 BZW1Q7L1Q6 419 aaKnown RBP12.08□□□□□ -0.48
TRERF1-203ENST00000372917 SRGAP1Q7Z6B7 1085 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 MFN1Q8IWA4 741 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 SIRT2Q8IXJ6 389 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
TRERF1-203ENST00000372917 LTV1Q96GA3 475 aaPredicted RBP12.08□□□□□ -0.48
TRERF1-203ENST00000372917 RANBP17Q9H2T7 1088 aaKnown RBP12.08□□□□□ -0.48
TRERF1-203ENST00000372917 TPX2Q9ULW0 747 aaKnown RBP12.08□□□□□ -0.48
TRERF1-203ENST00000372917 MAP3K4Q9Y6R4 1608 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms