RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 A0A1W2PQ64 194 aa17.14■□□□□ 0.33
COL9A2-202ENST00000372748 A0A1W2PQD8 194 aa17.14■□□□□ 0.33
COL9A2-202ENST00000372748 CDK11BP21127 795 aaKnown RBP17.14■□□□□ 0.33
COL9A2-202ENST00000372748 HAND2P61296 217 aa17.14■□□□□ 0.33
COL9A2-202ENST00000372748 TMCO3Q6UWJ1 677 aa17.14■□□□□ 0.33
COL9A2-202ENST00000372748 CCDC85AQ96PX6 553 aaPredicted RBP17.14■□□□□ 0.33
COL9A2-202ENST00000372748 CARD6Q9BX69 1037 aa17.14■□□□□ 0.33
COL9A2-202ENST00000372748 ORC3Q9UBD5 711 aaPredicted RBP17.14■□□□□ 0.33
COL9A2-202ENST00000372748 ALS2Q96Q42 1657 aa17.14■□□□□ 0.33
COL9A2-202ENST00000372748 H7C1W4 665 aa17.13■□□□□ 0.33
COL9A2-202ENST00000372748 MARCKSP29966 332 aaPredicted RBP17.13■□□□□ 0.33
COL9A2-202ENST00000372748 TPM4P67936 248 aa17.13■□□□□ 0.33
COL9A2-202ENST00000372748 C8orf76Q96K31 380 aa17.13■□□□□ 0.33
COL9A2-202ENST00000372748 AGXT2Q9BYV1 514 aa17.13■□□□□ 0.33
COL9A2-202ENST00000372748 PUS3Q9BZE2 481 aaKnown RBP17.13■□□□□ 0.33
COL9A2-202ENST00000372748 HNRNPH2P55795 449 aaKnown RBP17.13■□□□□ 0.33
COL9A2-202ENST00000372748 NLRP12P59046 1061 aa17.13■□□□□ 0.33
COL9A2-202ENST00000372748 CWC25Q9NXE8 425 aaPredicted RBP17.13■□□□□ 0.33
COL9A2-202ENST00000372748 CALCOCO1Q9P1Z2 691 aa17.13■□□□□ 0.33
COL9A2-202ENST00000372748 HSP90AA4PQ58FG1 418 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 ZCCHC17Q9NP64 241 aaKnown RBP17.12■□□□□ 0.33
COL9A2-202ENST00000372748 ARFGEF2Q9Y6D5 1785 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 SH3TC1Q8TE82 1336 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 SERPINC1P01008 464 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 PFKFB1P16118 471 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 CFAP100Q494V2 611 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 TRIM65Q6PJ69 517 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 NEK11Q8NG66 645 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 BPIFA3Q9BQP9 254 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 HSD3B7Q9H2F3 369 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 LMTK3Q96Q04 1460 aa17.12■□□□□ 0.33
COL9A2-202ENST00000372748 KIF28PB7ZC32 967 aa17.11■□□□□ 0.33
COL9A2-202ENST00000372748 UBASH3AP57075 661 aa17.11■□□□□ 0.33
COL9A2-202ENST00000372748 MST1RQ04912 1400 aa17.11■□□□□ 0.33
COL9A2-202ENST00000372748 ZNF274Q96GC6 653 aaPredicted RBP17.11■□□□□ 0.33
COL9A2-202ENST00000372748 ZRANB2O95218 330 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL9A2-202ENST00000372748 MYSM1Q5VVJ2 828 aa17.11■□□□□ 0.33
COL9A2-202ENST00000372748 DSCC1Q9BVC3 393 aa17.11■□□□□ 0.33
COL9A2-202ENST00000372748 ARGLU1Q9NWB6 273 aaPredicted RBP17.11■□□□□ 0.33
COL9A2-202ENST00000372748 KIF1AQ12756 1690 aa17.11■□□□□ 0.33
COL9A2-202ENST00000372748 IFIT1P09914 478 aaKnown RBP17.11■□□□□ 0.33
COL9A2-202ENST00000372748 SYNE3Q6ZMZ3 975 aa17.11■□□□□ 0.33
COL9A2-202ENST00000372748 TOM1L2Q6ZVM7 507 aa17.11■□□□□ 0.33
COL9A2-202ENST00000372748 MROH7-TTC4A0A0A0MT08 1334 aa17.1■□□□□ 0.33
COL9A2-202ENST00000372748 A0A1B0GUL7 405 aa17.1■□□□□ 0.33
COL9A2-202ENST00000372748 TMEM232C9JQI7 657 aa17.1■□□□□ 0.33
COL9A2-202ENST00000372748 WDHD1O75717 1129 aaPredicted RBP17.1■□□□□ 0.33
COL9A2-202ENST00000372748 FKBP4Q02790 459 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL9A2-202ENST00000372748 MAST3O60307 1309 aa17.1■□□□□ 0.33
COL9A2-202ENST00000372748 ZBTB9Q96C00 473 aa17.1■□□□□ 0.33
COL9A2-202ENST00000372748 POLR3EQ9NVU0 708 aa17.1■□□□□ 0.33
COL9A2-202ENST00000372748 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.1■□□□□ 0.33
COL9A2-202ENST00000372748 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
COL9A2-202ENST00000372748 COL18A1P39060 1754 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 TADA3O75528 432 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 CAPN2P17655 700 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
COL9A2-202ENST00000372748 FBXO18Q8NFZ0 1043 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 CCDC34Q96HJ3 373 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 HELLSQ9NRZ9 838 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 MYH15Q9Y2K3 1946 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 EYA2O00167 538 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 IL15P40933 162 aaPredicted RBP17.09■□□□□ 0.33
COL9A2-202ENST00000372748 KCNJ6P48051 423 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 EVCP57679 992 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 HSP90AB3PQ58FF7 597 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 ZMYM1Q5SVZ6 1142 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 REXO1L1PQ8IX06 675 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
COL9A2-202ENST00000372748 KLF18A0A0U1RQI7 1052 aa17.08■□□□□ 0.33
COL9A2-202ENST00000372748 GOLGA8BA8MQT2 603 aa17.08■□□□□ 0.33
COL9A2-202ENST00000372748 M0R2C6 588 aa17.08■□□□□ 0.33
COL9A2-202ENST00000372748 SASH3O75995 380 aa17.08■□□□□ 0.33
COL9A2-202ENST00000372748 YEATS4O95619 227 aa17.08■□□□□ 0.33
COL9A2-202ENST00000372748 ST5P78524 1137 aa17.08■□□□□ 0.33
COL9A2-202ENST00000372748 GNL2Q13823 731 aaKnown RBP17.08■□□□□ 0.33
COL9A2-202ENST00000372748 ANO1Q5XXA6 986 aa17.08■□□□□ 0.33
COL9A2-202ENST00000372748 ZCRB1Q8TBF4 217 aaKnown RBP17.08■□□□□ 0.33
COL9A2-202ENST00000372748 RFX7Q2KHR2 1363 aa17.08■□□□□ 0.33
COL9A2-202ENST00000372748 ABCC6O95255 1503 aa17.08■□□□□ 0.33
COL9A2-202ENST00000372748 PNOCQ13519 176 aa17.08■□□□□ 0.32
COL9A2-202ENST00000372748 AIFM3Q96NN9 605 aa17.08■□□□□ 0.32
COL9A2-202ENST00000372748 CPLX1O14810 134 aa17.07■□□□□ 0.32
COL9A2-202ENST00000372748 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
COL9A2-202ENST00000372748 PRDM11Q9NQV5 511 aa17.07■□□□□ 0.32
COL9A2-202ENST00000372748 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
COL9A2-202ENST00000372748 RNF113AO15541 343 aaKnown RBP17.07■□□□□ 0.32
COL9A2-202ENST00000372748 TOP1P11387 765 aaKnown RBP17.07■□□□□ 0.32
COL9A2-202ENST00000372748 ADORA1P30542 326 aa17.07■□□□□ 0.32
COL9A2-202ENST00000372748 SYKP43405 635 aa17.07■□□□□ 0.32
COL9A2-202ENST00000372748 TEX35Q5T0J7 233 aa17.07■□□□□ 0.32
COL9A2-202ENST00000372748 OSBP2Q969R2 916 aa17.07■□□□□ 0.32
COL9A2-202ENST00000372748 WDR24Q96S15 920 aa17.07■□□□□ 0.32
COL9A2-202ENST00000372748 FANCLQ9NW38 375 aa17.07■□□□□ 0.32
COL9A2-202ENST00000372748 SPATA31A3Q5VYP0 1347 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 VWA3AA6NCI4 1184 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 CMA1P23946 247 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 LRRFIP1Q32MZ4 808 aaKnown RBP17.06■□□□□ 0.32
COL9A2-202ENST00000372748 PDILTQ8N807 584 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms