RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 PPP2R2CQ9Y2T4 447 aa21.06■□□□□ 0.96
MMP9-201ENST00000372330 TUBBP07437 444 aa21.05■□□□□ 0.96
MMP9-201ENST00000372330 IFIT2P09913 472 aaKnown RBP21.05■□□□□ 0.96
MMP9-201ENST00000372330 MCM6Q14566 821 aa21.05■□□□□ 0.96
MMP9-201ENST00000372330 E2F4Q16254 413 aa21.05■□□□□ 0.96
MMP9-201ENST00000372330 CWF19L2Q2TBE0 894 aaKnown RBP21.05■□□□□ 0.96
MMP9-201ENST00000372330 ADAMTS7Q9UKP4 1686 aa21.05■□□□□ 0.96
MMP9-201ENST00000372330 SIPA1L3O60292 1781 aaPredicted RBP21.05■□□□□ 0.96
MMP9-201ENST00000372330 IKBKBO14920 756 aa21.05■□□□□ 0.96
MMP9-201ENST00000372330 SLC27A2O14975 620 aa21.05■□□□□ 0.96
MMP9-201ENST00000372330 TOB2Q14106 344 aaPredicted RBP21.05■□□□□ 0.96
MMP9-201ENST00000372330 NAA16Q6N069 864 aaPredicted RBP21.05■□□□□ 0.96
MMP9-201ENST00000372330 LINS1Q8NG48 757 aa21.05■□□□□ 0.96
MMP9-201ENST00000372330 DDX21Q9NR30 783 aaKnown RBP eCLIP21.05■□□□□ 0.96
MMP9-201ENST00000372330 KIAA1468Q9P260 1216 aa21.05■□□□□ 0.96
MMP9-201ENST00000372330 BCCIPQ9P287 314 aaKnown RBP eCLIP21.05■□□□□ 0.96
MMP9-201ENST00000372330 FSIP1Q8NA03 581 aa21.04■□□□□ 0.96
MMP9-201ENST00000372330 TACO1Q9BSH4 297 aaKnown RBP21.04■□□□□ 0.96
MMP9-201ENST00000372330 L1RE1Q9UN81 338 aa21.04■□□□□ 0.96
MMP9-201ENST00000372330 DCCP43146 1447 aa21.04■□□□□ 0.96
MMP9-201ENST00000372330 PRR29P0C7W0 189 aa21.04■□□□□ 0.96
MMP9-201ENST00000372330 EVI5LQ96CN4 794 aa21.04■□□□□ 0.96
MMP9-201ENST00000372330 DDX11Q96FC9 970 aa21.04■□□□□ 0.96
MMP9-201ENST00000372330 GBP3Q9H0R5 595 aa21.04■□□□□ 0.96
MMP9-201ENST00000372330 SNRKQ9NRH2 765 aa21.04■□□□□ 0.96
MMP9-201ENST00000372330 AKAP2Q9Y2D5 859 aa21.04■□□□□ 0.96
MMP9-201ENST00000372330 FAN1Q9Y2M0 1017 aa21.04■□□□□ 0.96
MMP9-201ENST00000372330 DDX58O95786 925 aaKnown RBP21.03■□□□□ 0.96
MMP9-201ENST00000372330 FANCCQ00597 558 aa21.03■□□□□ 0.96
MMP9-201ENST00000372330 ERC1Q8IUD2 1116 aa21.03■□□□□ 0.96
MMP9-201ENST00000372330 HMG20BQ9P0W2 317 aa21.03■□□□□ 0.96
MMP9-201ENST00000372330 TUBB2AQ13885 445 aa21.03■□□□□ 0.96
MMP9-201ENST00000372330 SRGAP1Q7Z6B7 1085 aa21.03■□□□□ 0.96
MMP9-201ENST00000372330 CADPS2Q86UW7 1296 aa21.03■□□□□ 0.96
MMP9-201ENST00000372330 FMR1NBQ8N0W7 255 aaPredicted RBP21.03■□□□□ 0.96
MMP9-201ENST00000372330 DDX54Q8TDD1 881 aaKnown RBP21.03■□□□□ 0.96
MMP9-201ENST00000372330 TUBB2BQ9BVA1 445 aa21.03■□□□□ 0.96
MMP9-201ENST00000372330 GRM8O00222 908 aa21.02■□□□□ 0.96
MMP9-201ENST00000372330 MYO1BO43795 1136 aa21.02■□□□□ 0.96
MMP9-201ENST00000372330 PDIA6Q15084 440 aa21.02■□□□□ 0.96
MMP9-201ENST00000372330 DPCR1Q3MIW9 517 aa21.02■□□□□ 0.96
MMP9-201ENST00000372330 MSANTD4Q8NCY6 345 aa21.02■□□□□ 0.96
MMP9-201ENST00000372330 RAPGEF4Q8WZA2 1011 aa21.02■□□□□ 0.96
MMP9-201ENST00000372330 MRPS27Q92552 414 aaKnown RBP21.02■□□□□ 0.96
MMP9-201ENST00000372330 UTYO14607 1347 aa21.02■□□□□ 0.96
MMP9-201ENST00000372330 CHMP4BP1P59074 171 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 CEBPZQ03701 1054 aaKnown RBP21.01■□□□□ 0.95
MMP9-201ENST00000372330 ZNF790Q6PG37 636 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 CEP112Q8N8E3 955 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 GPATCH3Q96I76 525 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 WDR24Q96S15 920 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 LLPHQ9BRT6 129 aaKnown RBP21.01■□□□□ 0.95
MMP9-201ENST00000372330 ECHDC1Q9NTX5 307 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 PA2G4Q9UQ80 394 aaKnown RBP21.01■□□□□ 0.95
MMP9-201ENST00000372330 A0A087WWV3 80 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 NLRP12P59046 1061 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 NCAPHQ15003 741 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 KIFC2Q96AC6 838 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 CARD10Q9BWT7 1032 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 SUFUQ9UMX1 484 aa21.01■□□□□ 0.95
MMP9-201ENST00000372330 A0A1W2PQ27 194 aa21■□□□□ 0.95
MMP9-201ENST00000372330 A0A1W2PQ64 194 aa21■□□□□ 0.95
MMP9-201ENST00000372330 A0A1W2PQD8 194 aa21■□□□□ 0.95
MMP9-201ENST00000372330 ME1P48163 572 aa21■□□□□ 0.95
MMP9-201ENST00000372330 TRDNQ13061 729 aa21■□□□□ 0.95
MMP9-201ENST00000372330 MICALL1Q8N3F8 863 aa21■□□□□ 0.95
MMP9-201ENST00000372330 CNNM3Q8NE01 707 aa21■□□□□ 0.95
MMP9-201ENST00000372330 KRT32Q14532 448 aa21■□□□□ 0.95
MMP9-201ENST00000372330 ADALQ6DHV7 355 aa21■□□□□ 0.95
MMP9-201ENST00000372330 CEP120Q8N960 986 aa21■□□□□ 0.95
MMP9-201ENST00000372330 CABLES1Q8TDN4 633 aa21■□□□□ 0.95
MMP9-201ENST00000372330 STX10O60499 249 aa20.99■□□□□ 0.95
MMP9-201ENST00000372330 JAK2O60674 1132 aa20.99■□□□□ 0.95
MMP9-201ENST00000372330 AIMP1Q12904 312 aaKnown RBP20.99■□□□□ 0.95
MMP9-201ENST00000372330 STK3Q13188 491 aa20.99■□□□□ 0.95
MMP9-201ENST00000372330 SLC39A6Q13433 755 aa20.99■□□□□ 0.95
MMP9-201ENST00000372330 KAZALD1Q96I82 304 aa20.99■□□□□ 0.95
MMP9-201ENST00000372330 SUCLG2Q96I99 432 aa20.99■□□□□ 0.95
MMP9-201ENST00000372330 SLC52A2Q9HAB3 445 aa20.99■□□□□ 0.95
MMP9-201ENST00000372330 XIRP1Q702N8 1843 aaKnown RBP20.99■□□□□ 0.95
MMP9-201ENST00000372330 ERLIN2O94905 339 aa20.99■□□□□ 0.95
MMP9-201ENST00000372330 UBASH3AP57075 661 aa20.99■□□□□ 0.95
MMP9-201ENST00000372330 FAM177A1Q8N128 213 aaPredicted RBP20.99■□□□□ 0.95
MMP9-201ENST00000372330 TOP1P11387 765 aaKnown RBP20.98■□□□□ 0.95
MMP9-201ENST00000372330 SATB1Q01826 763 aa20.98■□□□□ 0.95
MMP9-201ENST00000372330 VSTM4Q8IW00 320 aa20.98■□□□□ 0.95
MMP9-201ENST00000372330 ERCC4Q92889 916 aaPredicted RBP20.98■□□□□ 0.95
MMP9-201ENST00000372330 DHX58Q96C10 678 aa20.98■□□□□ 0.95
MMP9-201ENST00000372330 USP28Q96RU2 1077 aa20.98■□□□□ 0.95
MMP9-201ENST00000372330 ANKZF1Q9H8Y5 726 aa20.98■□□□□ 0.95
MMP9-201ENST00000372330 NLRP2Q9NX02 1062 aa20.98■□□□□ 0.95
MMP9-201ENST00000372330 KDM6AO15550 1401 aaPredicted RBP20.98■□□□□ 0.95
MMP9-201ENST00000372330 CUTAO60888 179 aa20.98■□□□□ 0.95
MMP9-201ENST00000372330 SMARCC2Q8TAQ2 1214 aa20.98■□□□□ 0.95
MMP9-201ENST00000372330 BICC1Q9H694 974 aaKnown RBP20.98■□□□□ 0.95
MMP9-201ENST00000372330 KDM4FA0A1W2PPD8 638 aa20.97■□□□□ 0.95
MMP9-201ENST00000372330 PHKG2P15735 406 aa20.97■□□□□ 0.95
MMP9-201ENST00000372330 TMEM139Q8IV31 216 aa20.97■□□□□ 0.95
MMP9-201ENST00000372330 FBXW7Q969H0 707 aa20.97■□□□□ 0.95
MMP9-201ENST00000372330 N4BP1O75113 896 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms