RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 AXIN2Q9Y2T1 843 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 PXDNLA1KZ92 1463 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 C1orf167Q5SNV9 1468 aa10.29□□□□□ -0.76
ATG4A-203ENST00000372232 PNMA6EA0A0J9YXQ4 647 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 KCNQ3O43525 872 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 RPS6KA5O75582 802 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 CHAMP1Q96JM3 812 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 CCDC171Q6TFL3 1326 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.28□□□□□ -0.76
ATG4A-203ENST00000372232 BTBD11A6QL63 1104 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 C21orf2O43822 256 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 EIF2S2P20042 333 aaKnown RBP10.28□□□□□ -0.76
ATG4A-203ENST00000372232 INHBEP58166 350 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 NR6A1Q15406 480 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 NAALADL2Q58DX5 795 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 ZGPATQ8N5A5 531 aaKnown RBP10.28□□□□□ -0.76
ATG4A-203ENST00000372232 SPC24Q8NBT2 197 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 FAM210AQ96ND0 272 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 FUCA2Q9BTY2 467 aa10.28□□□□□ -0.76
ATG4A-203ENST00000372232 CFAP99D6REC4 459 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 KIF2AO00139 706 aaPredicted RBP10.27□□□□□ -0.77
ATG4A-203ENST00000372232 PDE1AP54750 535 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 ZC3H6P61129 1189 aaKnown RBP10.27□□□□□ -0.77
ATG4A-203ENST00000372232 TPD52L1Q16890 204 aaPredicted RBP10.27□□□□□ -0.77
ATG4A-203ENST00000372232 ZC3H12AQ5D1E8 599 aaKnown RBP10.27□□□□□ -0.77
ATG4A-203ENST00000372232 C1orf141Q5JVX7 400 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 NBPF3Q9H094 633 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 MST1RQ04912 1400 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 H0YHG0 523 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 RNMTO43148 476 aaKnown RBP10.27□□□□□ -0.77
ATG4A-203ENST00000372232 UBTFL1P0CB47 393 aaPredicted RBP10.27□□□□□ -0.77
ATG4A-203ENST00000372232 ATN1P54259 1190 aaPredicted RBP10.27□□□□□ -0.77
ATG4A-203ENST00000372232 PRSS12P56730 875 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 SARNPP82979 210 aaKnown RBP10.27□□□□□ -0.77
ATG4A-203ENST00000372232 NYAP1Q6ZVC0 841 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 SULF1Q8IWU6 871 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 CERKQ8TCT0 537 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 USP26Q9BXU7 913 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 LRRCC1Q9C099 1032 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 CHPF2Q9P2E5 772 aa10.27□□□□□ -0.77
ATG4A-203ENST00000372232 PXDNQ92626 1479 aa10.26□□□□□ -0.77
ATG4A-203ENST00000372232 MPHOSPH10O00566 681 aaKnown RBP10.26□□□□□ -0.77
ATG4A-203ENST00000372232 GALR2O43603 387 aaPredicted RBP10.26□□□□□ -0.77
ATG4A-203ENST00000372232 FDX1P10109 184 aa10.26□□□□□ -0.77
ATG4A-203ENST00000372232 CASC1Q6TDU7 716 aa10.26□□□□□ -0.77
ATG4A-203ENST00000372232 CACNA1FO60840 1977 aa10.26□□□□□ -0.77
ATG4A-203ENST00000372232 TRPM3Q9HCF6 1732 aaPredicted RBP10.26□□□□□ -0.77
ATG4A-203ENST00000372232 SALL3Q9BXA9 1300 aa10.26□□□□□ -0.77
ATG4A-203ENST00000372232 RGPD2P0DJD1 1756 aa10.26□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L3A6NCW0 530 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L4A6NCW7 530 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 HOXA2O43364 376 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 C7P10643 843 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 MX1P20591 662 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 OAS2P29728 719 aaKnown RBP10.25□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L2Q6R6M4 530 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L1Q7RTZ2 530 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 FAXDC2Q96IV6 333 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 SRCIN1Q9C0H9 1055 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 MRVI1Q9Y6F6 885 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 ELP1O95163 1332 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 LMO7Q8WWI1 1683 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 OVOS2A0A0G2JMS6 1433 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 SMC2O95347 1197 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 SOX11P35716 441 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 IRX1P78414 480 aaPredicted RBP10.25□□□□□ -0.77
ATG4A-203ENST00000372232 ZSCAN25Q6NSZ9 544 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 EFCAB13Q8IY85 973 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 TMEM87AQ8NBN3 555 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 RDH13Q8NBN7 331 aa10.25□□□□□ -0.77
ATG4A-203ENST00000372232 PI4KAP2A4QPH2 592 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 TPM1P09493 284 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 ATF3P18847 181 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 LRMPQ12912 555 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 BEND3Q5T5X7 828 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 GIMAP6Q6P9H5 292 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 TMCO3Q6UWJ1 677 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 CCDC186Q7Z3E2 898 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 PI4KAP1Q8N8J0 262 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 SSH3Q8TE77 659 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 STAG1Q8WVM7 1258 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 ARGLU1Q9NWB6 273 aaPredicted RBP10.24□□□□□ -0.77
ATG4A-203ENST00000372232 KIF1AQ12756 1690 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 KDM3BQ7LBC6 1761 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 TMEM94Q12767 1356 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 CTAGE5O15320 804 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 SGSM2O43147 1006 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 GIGYF1O75420 1035 aaPredicted RBP10.24□□□□□ -0.77
ATG4A-203ENST00000372232 TSNAXIP1Q2TAA8 658 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 LEKR1Q6ZMV7 388 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 HELBQ8NG08 1087 aaPredicted RBP10.24□□□□□ -0.77
ATG4A-203ENST00000372232 PSMD1Q99460 953 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 L2HGDHQ9H9P8 463 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 DBF4Q9UBU7 674 aaPredicted RBP10.24□□□□□ -0.77
ATG4A-203ENST00000372232 HEG1Q9ULI3 1381 aa10.24□□□□□ -0.77
ATG4A-203ENST00000372232 GADD45BO75293 160 aaPredicted RBP10.23□□□□□ -0.77
ATG4A-203ENST00000372232 SCP2P22307 547 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 ZRSR1Q15695 479 aaKnown RBP10.23□□□□□ -0.77
ATG4A-203ENST00000372232 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms