RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 TRAK2O60296 914 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 IL1R1P14778 569 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 ADD2P35612 726 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 ZSCAN31Q96LW9 406 aaPredicted RBP15.42■□□□□ 0.06
LDB3-203ENST00000372056 SH2B1Q9NRF2 756 aaPredicted RBP15.42■□□□□ 0.06
LDB3-203ENST00000372056 CTNNA3Q9UI47 895 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 SUGT1Q9Y2Z0 365 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 LARGE1O95461 756 aa15.41■□□□□ 0.06
LDB3-203ENST00000372056 HSPD1P10809 573 aaKnown RBP15.41■□□□□ 0.06
LDB3-203ENST00000372056 GNAT2P19087 354 aa15.41■□□□□ 0.06
LDB3-203ENST00000372056 PTMSP20962 102 aa15.41■□□□□ 0.06
LDB3-203ENST00000372056 R3HDM1Q15032 1099 aaKnown RBP15.41■□□□□ 0.06
LDB3-203ENST00000372056 SLC9C2Q5TAH2 1124 aa15.41■□□□□ 0.06
LDB3-203ENST00000372056 RTFDC1Q9BY42 306 aaPredicted RBP15.41■□□□□ 0.06
LDB3-203ENST00000372056 DLEC1Q9Y238 1755 aa15.41■□□□□ 0.06
LDB3-203ENST00000372056 IDH1O75874 414 aaKnown RBP15.4■□□□□ 0.06
LDB3-203ENST00000372056 BRD1O95696 1058 aa15.4■□□□□ 0.06
LDB3-203ENST00000372056 SLF2Q8IX21 1173 aa15.4■□□□□ 0.06
LDB3-203ENST00000372056 MYH7P12883 1935 aa15.4■□□□□ 0.06
LDB3-203ENST00000372056 SNAP23O00161 211 aa15.4■□□□□ 0.06
LDB3-203ENST00000372056 GSTO1P78417 241 aa15.4■□□□□ 0.06
LDB3-203ENST00000372056 ANKRD1Q15327 319 aa15.4■□□□□ 0.06
LDB3-203ENST00000372056 NEK1Q96PY6 1258 aa15.4■□□□□ 0.06
LDB3-203ENST00000372056 PIH1D3Q9NQM4 214 aaKnown RBP15.4■□□□□ 0.06
LDB3-203ENST00000372056 PIM2Q9P1W9 311 aa15.4■□□□□ 0.06
LDB3-203ENST00000372056 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.4■□□□□ 0.06
LDB3-203ENST00000372056 COL11A2P13942 1736 aaPredicted RBP15.39■□□□□ 0.05
LDB3-203ENST00000372056 G3V3G9 751 aa15.39■□□□□ 0.05
LDB3-203ENST00000372056 GOLGA6L22H0YM25 854 aa15.39■□□□□ 0.05
LDB3-203ENST00000372056 ME3Q16798 604 aa15.39■□□□□ 0.05
LDB3-203ENST00000372056 DCAF8Q5TAQ9 597 aa15.39■□□□□ 0.05
LDB3-203ENST00000372056 PODNQ7Z5L7 613 aa15.39■□□□□ 0.05
LDB3-203ENST00000372056 CD209Q9NNX6 404 aa15.39■□□□□ 0.05
LDB3-203ENST00000372056 TPCN1Q9ULQ1 816 aa15.39■□□□□ 0.05
LDB3-203ENST00000372056 DOCK2Q92608 1830 aa15.38■□□□□ 0.05
LDB3-203ENST00000372056 FOXP2O15409 715 aa15.38■□□□□ 0.05
LDB3-203ENST00000372056 ZBTB7AO95365 584 aa15.38■□□□□ 0.05
LDB3-203ENST00000372056 LDHCP07864 332 aa15.38■□□□□ 0.05
LDB3-203ENST00000372056 PDE6AP16499 860 aa15.38■□□□□ 0.05
LDB3-203ENST00000372056 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
LDB3-203ENST00000372056 CCDC93Q567U6 631 aa15.38■□□□□ 0.05
LDB3-203ENST00000372056 TCEANC2Q96MN5 208 aa15.38■□□□□ 0.05
LDB3-203ENST00000372056 PUS7LQ9H0K6 701 aaKnown RBP15.38■□□□□ 0.05
LDB3-203ENST00000372056 POLLQ9UGP5 575 aa15.38■□□□□ 0.05
LDB3-203ENST00000372056 LTBP1Q14766 1721 aa15.38■□□□□ 0.05
LDB3-203ENST00000372056 ST3GAL1Q11201 340 aa15.37■□□□□ 0.05
LDB3-203ENST00000372056 STOX1Q6ZVD7 989 aa15.37■□□□□ 0.05
LDB3-203ENST00000372056 C7orf43Q8WVR3 580 aa15.37■□□□□ 0.05
LDB3-203ENST00000372056 PSMD1Q99460 953 aa15.37■□□□□ 0.05
LDB3-203ENST00000372056 PDGFDQ9GZP0 370 aaPredicted RBP15.37■□□□□ 0.05
LDB3-203ENST00000372056 MYH13Q9UKX3 1938 aa15.37■□□□□ 0.05
LDB3-203ENST00000372056 FAM205AQ6ZU69 1335 aa15.37■□□□□ 0.05
LDB3-203ENST00000372056 FKBP1AP62942 108 aaKnown RBP15.37■□□□□ 0.05
LDB3-203ENST00000372056 SKOR2Q2VWA4 1001 aaPredicted RBP15.37■□□□□ 0.05
LDB3-203ENST00000372056 CCDC83Q8IWF9 413 aa15.37■□□□□ 0.05
LDB3-203ENST00000372056 SPON1Q9HCB6 807 aa15.37■□□□□ 0.05
LDB3-203ENST00000372056 HMGB1P09429 215 aaKnown RBP15.36■□□□□ 0.05
LDB3-203ENST00000372056 CHRNA5P30532 468 aa15.36■□□□□ 0.05
LDB3-203ENST00000372056 MCTP1Q6DN14 999 aa15.36■□□□□ 0.05
LDB3-203ENST00000372056 AIDAQ96BJ3 306 aa15.36■□□□□ 0.05
LDB3-203ENST00000372056 SGIP1Q9BQI5 828 aa15.36■□□□□ 0.05
LDB3-203ENST00000372056 RAI14Q9P0K7 980 aa15.36■□□□□ 0.05
LDB3-203ENST00000372056 ABCF2Q9UG63 623 aa15.36■□□□□ 0.05
LDB3-203ENST00000372056 SMC3Q9UQE7 1217 aa15.36■□□□□ 0.05
LDB3-203ENST00000372056 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
LDB3-203ENST00000372056 WDR33Q9C0J8 1336 aaKnown RBP15.36■□□□□ 0.05
LDB3-203ENST00000372056 ZNF532Q9HCE3 1301 aa15.36■□□□□ 0.05
LDB3-203ENST00000372056 GPAA1O43292 621 aa15.35■□□□□ 0.05
LDB3-203ENST00000372056 NACAP1Q9BZK3 213 aa15.35■□□□□ 0.05
LDB3-203ENST00000372056 ZMYM6O95789 1325 aa15.35■□□□□ 0.05
LDB3-203ENST00000372056 A0A0G2JLW4 131 aa15.35■□□□□ 0.05
LDB3-203ENST00000372056 TCRBV5S4A2TA0A5A2 114 aa15.35■□□□□ 0.05
LDB3-203ENST00000372056 LDHBP07195 334 aaKnown RBP15.35■□□□□ 0.05
LDB3-203ENST00000372056 ALX1Q15699 326 aa15.35■□□□□ 0.05
LDB3-203ENST00000372056 DALRD3Q5D0E6 543 aaKnown RBP15.35■□□□□ 0.05
LDB3-203ENST00000372056 FOXD4L5Q5VV16 416 aaPredicted RBP15.35■□□□□ 0.05
LDB3-203ENST00000372056 NAA16Q6N069 864 aaPredicted RBP15.35■□□□□ 0.05
LDB3-203ENST00000372056 MAGEB6Q8N7X4 407 aa15.35■□□□□ 0.05
LDB3-203ENST00000372056 FOXD4L4Q8WXT5 416 aaPredicted RBP15.35■□□□□ 0.05
LDB3-203ENST00000372056 NOL10Q9BSC4 688 aaKnown RBP15.35■□□□□ 0.05
LDB3-203ENST00000372056 E7EWF7 191 aa15.34■□□□□ 0.05
LDB3-203ENST00000372056 DPEP1P16444 411 aa15.34■□□□□ 0.05
LDB3-203ENST00000372056 NT5C2P49902 561 aa15.34■□□□□ 0.05
LDB3-203ENST00000372056 TTLL5Q6EMB2 1281 aa15.34■□□□□ 0.05
LDB3-203ENST00000372056 TXNRD3Q86VQ6 643 aa15.34■□□□□ 0.05
LDB3-203ENST00000372056 NECAB1Q8N987 351 aa15.34■□□□□ 0.05
LDB3-203ENST00000372056 WWC3Q9ULE0 1092 aa15.34■□□□□ 0.05
LDB3-203ENST00000372056 SLX4Q8IY92 1834 aa15.34■□□□□ 0.05
LDB3-203ENST00000372056 BAG3O95817 575 aa15.33■□□□□ 0.05
LDB3-203ENST00000372056 KCNA3P22001 575 aa15.33■□□□□ 0.05
LDB3-203ENST00000372056 MMP14P50281 582 aa15.33■□□□□ 0.05
LDB3-203ENST00000372056 GIMAP6Q6P9H5 292 aa15.33■□□□□ 0.05
LDB3-203ENST00000372056 DHX32Q7L7V1 743 aaKnown RBP15.33■□□□□ 0.05
LDB3-203ENST00000372056 CCDC88AQ3V6T2 1871 aa15.33■□□□□ 0.05
LDB3-203ENST00000372056 MYO5AQ9Y4I1 1855 aaKnown RBP15.33■□□□□ 0.05
LDB3-203ENST00000372056 PATL2C9JE40 543 aaKnown RBP15.33■□□□□ 0.04
LDB3-203ENST00000372056 FGAP02671 866 aa15.33■□□□□ 0.04
LDB3-203ENST00000372056 PLCG2P16885 1265 aa15.33■□□□□ 0.04
LDB3-203ENST00000372056 SYT1P21579 422 aa15.33■□□□□ 0.04
LDB3-203ENST00000372056 CYP7A1P22680 504 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms