RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 TFCP2Q12800 502 aa13.51□□□□□ -0.25
TSPAN1-201ENST00000372003 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
TSPAN1-201ENST00000372003 HSP90AB4PQ58FF6 505 aa13.51□□□□□ -0.25
TSPAN1-201ENST00000372003 CNTROBQ8N137 903 aa13.51□□□□□ -0.25
TSPAN1-201ENST00000372003 SUPT20HQ8NEM7 779 aa13.51□□□□□ -0.25
TSPAN1-201ENST00000372003 PSMD1Q99460 953 aa13.51□□□□□ -0.25
TSPAN1-201ENST00000372003 ZNF804BA4D1E1 1349 aa13.51□□□□□ -0.25
TSPAN1-201ENST00000372003 BRCA1P38398 1863 aaKnown RBP13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 PPIP5K2O43314 1243 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 PRELPP51888 382 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 AOC3Q16853 763 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 KCNB2Q92953 911 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 RTFDC1Q9BY42 306 aaPredicted RBP13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 UPF3BQ9BZI7 483 aaKnown RBP13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 ZC3H12CQ9C0D7 883 aaKnown RBP13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 SMC3Q9UQE7 1217 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 LEMD3Q9Y2U8 911 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 SNX14Q9Y5W7 946 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 CACNA1SQ13698 1873 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 SASH1O94885 1247 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 CCDC192P0DO97 292 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 SYT1P21579 422 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 KLRK1P26718 216 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 LARGE2Q8N3Y3 721 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 VGLL2Q8N8G2 317 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 RUFY2Q8WXA3 655 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 EYA3Q99504 573 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 LSG1Q9H089 658 aaKnown RBP13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 RNF181Q9P0P0 153 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 CNPY2Q9Y2B0 182 aa13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.5□□□□□ -0.25
TSPAN1-201ENST00000372003 SNED1Q8TER0 1413 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 TTC41PQ6P2S7 1318 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 UTRNP46939 3433 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 G3V3G9 751 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 CTIFO43310 598 aaKnown RBP13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 LMNB1P20700 586 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 IARSP41252 1262 aaKnown RBP13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 VPS53Q5VIR6 699 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 C9orf131Q5VYM1 1079 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 TXNRD3Q86VQ6 643 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 KIF1BPQ96EK5 621 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 GDPD2Q9HCC8 539 aa13.49□□□□□ -0.25
TSPAN1-201ENST00000372003 ELP1O95163 1332 aa13.48□□□□□ -0.25
TSPAN1-201ENST00000372003 LTBP3Q9NS15 1303 aa13.48□□□□□ -0.25
TSPAN1-201ENST00000372003 KIF20AO95235 890 aa13.48□□□□□ -0.25
TSPAN1-201ENST00000372003 AK2P54819 239 aa13.48□□□□□ -0.25
TSPAN1-201ENST00000372003 TIMM10P62072 90 aa13.48□□□□□ -0.25
TSPAN1-201ENST00000372003 UBE4AQ14139 1066 aa13.48□□□□□ -0.25
TSPAN1-201ENST00000372003 PUM3Q15397 648 aaKnown RBP13.48□□□□□ -0.25
TSPAN1-201ENST00000372003 PI4K2BQ8TCG2 481 aa13.48□□□□□ -0.25
TSPAN1-201ENST00000372003 ANKRD7Q92527 254 aa13.48□□□□□ -0.25
TSPAN1-201ENST00000372003 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
TSPAN1-201ENST00000372003 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
TSPAN1-201ENST00000372003 ATP2B3Q16720 1220 aa13.47□□□□□ -0.25
TSPAN1-201ENST00000372003 RUFY3Q7L099 469 aa13.47□□□□□ -0.25
TSPAN1-201ENST00000372003 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.47□□□□□ -0.25
TSPAN1-201ENST00000372003 JDP2Q8WYK2 163 aa13.47□□□□□ -0.25
TSPAN1-201ENST00000372003 NEUROD6Q96NK8 337 aa13.47□□□□□ -0.25
TSPAN1-201ENST00000372003 FEZ1Q99689 392 aa13.47□□□□□ -0.25
TSPAN1-201ENST00000372003 DBNDD1Q9H9R9 158 aa13.47□□□□□ -0.25
TSPAN1-201ENST00000372003 IL1RAPL2Q9NP60 686 aa13.47□□□□□ -0.25
TSPAN1-201ENST00000372003 IFIT1P09914 478 aaKnown RBP13.46□□□□□ -0.25
TSPAN1-201ENST00000372003 NOL8Q76FK4 1167 aaKnown RBP13.46□□□□□ -0.25
TSPAN1-201ENST00000372003 ERC1Q8IUD2 1116 aa13.46□□□□□ -0.25
TSPAN1-201ENST00000372003 FAM200AQ8TCP9 573 aa13.46□□□□□ -0.25
TSPAN1-201ENST00000372003 RHPN1Q8TCX5 695 aa13.46□□□□□ -0.25
TSPAN1-201ENST00000372003 LPIN2Q92539 896 aa13.46□□□□□ -0.25
TSPAN1-201ENST00000372003 AKAP2Q9Y2D5 859 aa13.46□□□□□ -0.25
TSPAN1-201ENST00000372003 A0A1B0GUL7 405 aa13.46□□□□□ -0.26
TSPAN1-201ENST00000372003 CAVIN2O95810 425 aa13.46□□□□□ -0.26
TSPAN1-201ENST00000372003 SLC5A1P13866 664 aa13.46□□□□□ -0.26
TSPAN1-201ENST00000372003 FGFR2P21802 821 aa13.46□□□□□ -0.26
TSPAN1-201ENST00000372003 GYG1P46976 350 aa13.46□□□□□ -0.26
TSPAN1-201ENST00000372003 TSHZ3Q63HK5 1081 aa13.46□□□□□ -0.26
TSPAN1-201ENST00000372003 NIM1KQ8IY84 436 aa13.46□□□□□ -0.26
TSPAN1-201ENST00000372003 VPS33BQ9H267 617 aa13.46□□□□□ -0.26
TSPAN1-201ENST00000372003 MTMR6Q9Y217 621 aa13.46□□□□□ -0.26
TSPAN1-201ENST00000372003 SPEF2Q9C093 1822 aa13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 GLRX3O76003 335 aaKnown RBP13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 PDCP20941 246 aa13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 ADORA1P30542 326 aa13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 TNNI3KQ59H18 835 aa13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 PDCL2Q8N4E4 241 aa13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 ZNF830Q96NB3 372 aaPredicted RBP13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 ALDH8A1Q9H2A2 487 aaPredicted RBP13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 FPGT-TNNI3KV9GXZ4 949 aa13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 DUOX1Q9NRD9 1551 aa13.45□□□□□ -0.26
TSPAN1-201ENST00000372003 LRRC37AA6NMS7 1700 aa13.44□□□□□ -0.26
TSPAN1-201ENST00000372003 ECE2O60344 883 aa13.44□□□□□ -0.26
TSPAN1-201ENST00000372003 BCAMP50895 628 aa13.44□□□□□ -0.26
TSPAN1-201ENST00000372003 CAVIN4Q5BKX8 364 aa13.44□□□□□ -0.26
TSPAN1-201ENST00000372003 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
TSPAN1-201ENST00000372003 CCDC8Q9H0W5 538 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms