RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 VEZTQ9HBM0 779 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 COPRSQ9NQ92 184 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 ANGEL1Q9UNK9 670 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 AKAP11Q9UKA4 1901 aa13.71□□□□□ -0.21
EXOSC1-202ENST00000370885 PNMA6EA0A0J9YXQ4 647 aa13.71□□□□□ -0.21
EXOSC1-202ENST00000370885 IFIT1P09914 478 aaKnown RBP13.71□□□□□ -0.21
EXOSC1-202ENST00000370885 RLBP1P12271 317 aa13.71□□□□□ -0.21
EXOSC1-202ENST00000370885 PHKA1P46020 1223 aa13.71□□□□□ -0.21
EXOSC1-202ENST00000370885 CACNB3P54284 484 aa13.71□□□□□ -0.21
EXOSC1-202ENST00000370885 MYH13Q9UKX3 1938 aa13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 CA12O43570 354 aa13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 USP2O75604 605 aaPredicted RBP13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 SLC5A1P13866 664 aa13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 TIMM10P62072 90 aa13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 MTX1Q13505 466 aa13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 MAP3K11Q16584 847 aa13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 ATP2B3Q16720 1220 aa13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 APOBEC3HQ6NTF7 200 aaKnown RBP13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 CEP126Q9P2H0 1117 aa13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
EXOSC1-202ENST00000370885 OTOFQ9HC10 1997 aa13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 TCP10L2B9ZVM9 353 aa13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 FRAT2O75474 233 aaPredicted RBP13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 NF2P35240 595 aa13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 GJA5P36382 358 aa13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 IL15P40933 162 aaPredicted RBP13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 ABHD8Q96I13 439 aa13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 TMEM39BQ9GZU3 492 aa13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 R3HDMLQ9H3Y0 253 aa13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 PPP2R3BQ9Y5P8 575 aa13.69□□□□□ -0.22
EXOSC1-202ENST00000370885 IPO8O15397 1037 aaKnown RBP13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 MYO1BO43795 1136 aa13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 GNAI3P08754 354 aa13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 PRDX5P30044 214 aa13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 TFCP2Q12800 502 aa13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 SPRYD7Q5W111 196 aa13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 ARMC9Q7Z3E5 817 aa13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 TBC1D22AQ8WUA7 517 aa13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 ZDHHC15Q96MV8 337 aa13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 SAGE1Q9NXZ1 904 aa13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
EXOSC1-202ENST00000370885 TBC1D8O95759 1140 aa13.67□□□□□ -0.22
EXOSC1-202ENST00000370885 TM4SF4P48230 202 aa13.67□□□□□ -0.22
EXOSC1-202ENST00000370885 HDLBPQ00341 1268 aaKnown RBP13.67□□□□□ -0.22
EXOSC1-202ENST00000370885 DIXDC1Q155Q3 683 aa13.67□□□□□ -0.22
EXOSC1-202ENST00000370885 ZKSCAN2Q63HK3 967 aa13.67□□□□□ -0.22
EXOSC1-202ENST00000370885 CCDC102BQ68D86 513 aa13.67□□□□□ -0.22
EXOSC1-202ENST00000370885 MRIQ9BWK5 157 aa13.67□□□□□ -0.22
EXOSC1-202ENST00000370885 MCOLN1Q9GZU1 580 aa13.67□□□□□ -0.22
EXOSC1-202ENST00000370885 ZBED9Q6R2W3 1325 aa13.66□□□□□ -0.22
EXOSC1-202ENST00000370885 GNAI2P04899 355 aa13.66□□□□□ -0.22
EXOSC1-202ENST00000370885 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
EXOSC1-202ENST00000370885 TEKT1Q969V4 418 aa13.66□□□□□ -0.22
EXOSC1-202ENST00000370885 C1orf115Q9H7X2 142 aa13.66□□□□□ -0.22
EXOSC1-202ENST00000370885 LAMB1P07942 1786 aa13.66□□□□□ -0.22
EXOSC1-202ENST00000370885 A0A1B0GUL7 405 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 RASGRF1Q13972 1273 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 SUPT20HL1Q3ZLR7 823 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 HHIPL2Q6UWX4 724 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 WDR66Q8TBY9 1149 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 ZNF384Q8TF68 577 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 SLC10A4Q96EP9 437 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 XAGE2Q96GT9 111 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 WNK4Q96J92 1243 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 HDAC5Q9UQL6 1122 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 DAGLAQ9Y4D2 1042 aa13.65□□□□□ -0.22
EXOSC1-202ENST00000370885 ZBTB7BO15156 539 aaPredicted RBP13.64□□□□□ -0.23
EXOSC1-202ENST00000370885 PPP1R12BO60237 982 aaPredicted RBP13.64□□□□□ -0.23
EXOSC1-202ENST00000370885 NFIAQ12857 509 aa13.64□□□□□ -0.23
EXOSC1-202ENST00000370885 DGKZQ13574 1117 aa13.64□□□□□ -0.23
EXOSC1-202ENST00000370885 POLA2Q14181 598 aa13.64□□□□□ -0.23
EXOSC1-202ENST00000370885 CDC42EP5Q6NZY7 148 aa13.64□□□□□ -0.23
EXOSC1-202ENST00000370885 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
EXOSC1-202ENST00000370885 SUGT1Q9Y2Z0 365 aa13.64□□□□□ -0.23
EXOSC1-202ENST00000370885 HTTP42858 3142 aa13.64□□□□□ -0.23
EXOSC1-202ENST00000370885 SALL1Q9NSC2 1324 aa13.64□□□□□ -0.23
EXOSC1-202ENST00000370885 IGF2BP3O00425 579 aaKnown RBP eCLIP13.63□□□□□ -0.23
EXOSC1-202ENST00000370885 ZBTB22O15209 634 aa13.63□□□□□ -0.23
EXOSC1-202ENST00000370885 ZFPM1Q8IX07 1006 aa13.63□□□□□ -0.23
EXOSC1-202ENST00000370885 REM2Q8IYK8 340 aaPredicted RBP13.63□□□□□ -0.23
EXOSC1-202ENST00000370885 PANK1Q8TE04 598 aa13.63□□□□□ -0.23
EXOSC1-202ENST00000370885 PTPN18Q99952 460 aa13.63□□□□□ -0.23
EXOSC1-202ENST00000370885 SLURP2P0DP57 97 aa13.62□□□□□ -0.23
EXOSC1-202ENST00000370885 ATP8B2P98198 1209 aa13.62□□□□□ -0.23
EXOSC1-202ENST00000370885 TNFAIP1Q13829 316 aa13.62□□□□□ -0.23
EXOSC1-202ENST00000370885 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.62□□□□□ -0.23
EXOSC1-202ENST00000370885 SSH3Q8TE77 659 aa13.62□□□□□ -0.23
EXOSC1-202ENST00000370885 ZNF296Q8WUU4 475 aaPredicted RBP13.62□□□□□ -0.23
EXOSC1-202ENST00000370885 ELP3Q9H9T3 547 aa13.62□□□□□ -0.23
EXOSC1-202ENST00000370885 FAM198AQ9UFP1 575 aa13.62□□□□□ -0.23
EXOSC1-202ENST00000370885 DENND2AQ9ULE3 1009 aa13.62□□□□□ -0.23
EXOSC1-202ENST00000370885 MYH2Q9UKX2 1941 aa13.62□□□□□ -0.23
EXOSC1-202ENST00000370885 SEMA3EO15041 775 aa13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 LDHBP07195 334 aaKnown RBP13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 IREB2P48200 963 aaKnown RBP13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 CAP1Q01518 475 aa13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 VGLL4Q14135 290 aa13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 FAM83AQ86UY5 434 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms