RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 OPTNQ96CV9 577 aa19.04■□□□□ 0.64
RPF1-202ENST00000370656 ELP3Q9H9T3 547 aa19.04■□□□□ 0.64
RPF1-202ENST00000370656 CNNM1Q9NRU3 951 aa19.04■□□□□ 0.64
RPF1-202ENST00000370656 SERPINA10Q9UK55 444 aa19.04■□□□□ 0.64
RPF1-202ENST00000370656 JAG2Q9Y219 1238 aa19.04■□□□□ 0.64
RPF1-202ENST00000370656 WDHD1O75717 1129 aaPredicted RBP19.03■□□□□ 0.64
RPF1-202ENST00000370656 TNNI2P48788 182 aa19.03■□□□□ 0.64
RPF1-202ENST00000370656 FOXO4P98177 505 aa19.03■□□□□ 0.64
RPF1-202ENST00000370656 WDR63Q8IWG1 891 aa19.03■□□□□ 0.64
RPF1-202ENST00000370656 PTPN18Q99952 460 aa19.03■□□□□ 0.64
RPF1-202ENST00000370656 FAM205AQ6ZU69 1335 aa19.02■□□□□ 0.64
RPF1-202ENST00000370656 FXR1P51114 621 aaKnown RBP eCLIP19.02■□□□□ 0.64
RPF1-202ENST00000370656 GTF2A2P52657 109 aa19.02■□□□□ 0.64
RPF1-202ENST00000370656 SPDYE2Q495Y8 402 aa19.02■□□□□ 0.64
RPF1-202ENST00000370656 MFSD14BQ5SR56 506 aa19.02■□□□□ 0.64
RPF1-202ENST00000370656 LMBR1LQ6UX01 489 aa19.02■□□□□ 0.64
RPF1-202ENST00000370656 ZFYVE28Q9HCC9 887 aa19.02■□□□□ 0.64
RPF1-202ENST00000370656 ZNF70Q9UC06 446 aaPredicted RBP19.02■□□□□ 0.64
RPF1-202ENST00000370656 TTF2Q9UNY4 1162 aaKnown RBP19.02■□□□□ 0.64
RPF1-202ENST00000370656 ARAP2Q8WZ64 1704 aa19.02■□□□□ 0.63
RPF1-202ENST00000370656 EN2P19622 333 aaPredicted RBP19.01■□□□□ 0.63
RPF1-202ENST00000370656 SLFN5Q08AF3 891 aa19.01■□□□□ 0.63
RPF1-202ENST00000370656 TAF1CQ15572 869 aaPredicted RBP19.01■□□□□ 0.63
RPF1-202ENST00000370656 SLC9C1Q4G0N8 1177 aa19.01■□□□□ 0.63
RPF1-202ENST00000370656 CSADQ9Y600 493 aa19.01■□□□□ 0.63
RPF1-202ENST00000370656 AOX1Q06278 1338 aa19■□□□□ 0.63
RPF1-202ENST00000370656 UBE4AQ14139 1066 aa19■□□□□ 0.63
RPF1-202ENST00000370656 MS4A4AQ96JQ5 239 aa19■□□□□ 0.63
RPF1-202ENST00000370656 TDRD3Q9H7E2 651 aaKnown RBP19■□□□□ 0.63
RPF1-202ENST00000370656 SALL2Q9Y467 1007 aaPredicted RBP19■□□□□ 0.63
RPF1-202ENST00000370656 CCL15-CCL14A0A0B4J2E2 113 aa18.99■□□□□ 0.63
RPF1-202ENST00000370656 ABCB7O75027 752 aa18.99■□□□□ 0.63
RPF1-202ENST00000370656 HIBADHP31937 336 aaKnown RBP18.99■□□□□ 0.63
RPF1-202ENST00000370656 MAP3K9P80192 1104 aa18.99■□□□□ 0.63
RPF1-202ENST00000370656 CCL15Q16663 113 aa18.99■□□□□ 0.63
RPF1-202ENST00000370656 BEND3Q5T5X7 828 aa18.99■□□□□ 0.63
RPF1-202ENST00000370656 DZIP1LQ8IYY4 767 aaKnown RBP18.99■□□□□ 0.63
RPF1-202ENST00000370656 TDRD7Q8NHU6 1098 aaKnown RBP18.99■□□□□ 0.63
RPF1-202ENST00000370656 CDCA7LQ96GN5 454 aa18.99■□□□□ 0.63
RPF1-202ENST00000370656 ZNF594Q96JF6 807 aaPredicted RBP18.99■□□□□ 0.63
RPF1-202ENST00000370656 ZNF333Q96JL9 665 aa18.99■□□□□ 0.63
RPF1-202ENST00000370656 C9orf78Q9NZ63 289 aaPredicted RBP18.99■□□□□ 0.63
RPF1-202ENST00000370656 FANCIQ9NVI1 1328 aa18.99■□□□□ 0.63
RPF1-202ENST00000370656 CEP290O15078 2479 aa18.98■□□□□ 0.63
RPF1-202ENST00000370656 GRM8O00222 908 aa18.98■□□□□ 0.63
RPF1-202ENST00000370656 KIF22Q14807 665 aa18.98■□□□□ 0.63
RPF1-202ENST00000370656 SLC4A8Q2Y0W8 1093 aa18.98■□□□□ 0.63
RPF1-202ENST00000370656 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.98■□□□□ 0.63
RPF1-202ENST00000370656 BRI3BPQ8WY22 251 aa18.98■□□□□ 0.63
RPF1-202ENST00000370656 TCP10L2B9ZVM9 353 aa18.97■□□□□ 0.63
RPF1-202ENST00000370656 E9PSI1 815 aa18.97■□□□□ 0.63
RPF1-202ENST00000370656 F6X3S4 739 aa18.97■□□□□ 0.63
RPF1-202ENST00000370656 VAMP4O75379 141 aa18.97■□□□□ 0.63
RPF1-202ENST00000370656 CRKP46108 304 aa18.97■□□□□ 0.63
RPF1-202ENST00000370656 GYG1P46976 350 aa18.97■□□□□ 0.63
RPF1-202ENST00000370656 VGLL4Q14135 290 aa18.97■□□□□ 0.63
RPF1-202ENST00000370656 VPS37DQ86XT2 251 aa18.97■□□□□ 0.63
RPF1-202ENST00000370656 TEPSINQ96N21 525 aa18.97■□□□□ 0.63
RPF1-202ENST00000370656 EPHA10Q5JZY3 1008 aa18.96■□□□□ 0.63
RPF1-202ENST00000370656 HOOK2Q96ED9 719 aa18.96■□□□□ 0.63
RPF1-202ENST00000370656 OTUD5Q96G74 571 aa18.96■□□□□ 0.63
RPF1-202ENST00000370656 TMEM39BQ9GZU3 492 aa18.96■□□□□ 0.63
RPF1-202ENST00000370656 PTCH2Q9Y6C5 1203 aa18.96■□□□□ 0.63
RPF1-202ENST00000370656 CETPP11597 493 aa18.95■□□□□ 0.62
RPF1-202ENST00000370656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.95■□□□□ 0.62
RPF1-202ENST00000370656 FAM84BQ96KN1 310 aaPredicted RBP18.95■□□□□ 0.62
RPF1-202ENST00000370656 ZCCHC17Q9NP64 241 aaKnown RBP18.95■□□□□ 0.62
RPF1-202ENST00000370656 COLQQ9Y215 455 aaPredicted RBP18.95■□□□□ 0.62
RPF1-202ENST00000370656 FRAT2O75474 233 aaPredicted RBP18.94■□□□□ 0.62
RPF1-202ENST00000370656 GNRH1P01148 92 aa18.94■□□□□ 0.62
RPF1-202ENST00000370656 HDLBPQ00341 1268 aaKnown RBP18.94■□□□□ 0.62
RPF1-202ENST00000370656 CAP1Q01518 475 aa18.94■□□□□ 0.62
RPF1-202ENST00000370656 EXOSC9Q06265 439 aaKnown RBP18.94■□□□□ 0.62
RPF1-202ENST00000370656 FAM43AQ8N2R8 423 aa18.94■□□□□ 0.62
RPF1-202ENST00000370656 TBC1D22AQ8WUA7 517 aa18.94■□□□□ 0.62
RPF1-202ENST00000370656 TMOD2Q9NZR1 351 aa18.94■□□□□ 0.62
RPF1-202ENST00000370656 GTF3C3Q9Y5Q9 886 aa18.94■□□□□ 0.62
RPF1-202ENST00000370656 MROH5Q6ZUA9 1318 aa18.94■□□□□ 0.62
RPF1-202ENST00000370656 SPDYE5A6NIY4 337 aa18.93■□□□□ 0.62
RPF1-202ENST00000370656 ALDH1L1O75891 902 aa18.93■□□□□ 0.62
RPF1-202ENST00000370656 CAVIN4Q5BKX8 364 aa18.93■□□□□ 0.62
RPF1-202ENST00000370656 ERO1BQ86YB8 467 aa18.93■□□□□ 0.62
RPF1-202ENST00000370656 CDAN1Q8IWY9 1227 aa18.93■□□□□ 0.62
RPF1-202ENST00000370656 TEKT1Q969V4 418 aa18.93■□□□□ 0.62
RPF1-202ENST00000370656 TLR2O60603 784 aa18.92■□□□□ 0.62
RPF1-202ENST00000370656 PRMT2P55345 433 aa18.92■□□□□ 0.62
RPF1-202ENST00000370656 SNAPC2Q13487 334 aa18.92■□□□□ 0.62
RPF1-202ENST00000370656 SRCIN1Q9C0H9 1055 aa18.92■□□□□ 0.62
RPF1-202ENST00000370656 LACTBP83111 547 aaPredicted RBP18.91■□□□□ 0.62
RPF1-202ENST00000370656 CHAF1AQ13111 956 aaPredicted RBP18.91■□□□□ 0.62
RPF1-202ENST00000370656 SLC4A10Q6U841 1118 aa18.91■□□□□ 0.62
RPF1-202ENST00000370656 WRNIP1Q96S55 665 aa18.91■□□□□ 0.62
RPF1-202ENST00000370656 MYCP01106 439 aaPredicted RBP18.9■□□□□ 0.62
RPF1-202ENST00000370656 DCAF15Q66K64 600 aa18.9■□□□□ 0.62
RPF1-202ENST00000370656 FAM83AQ86UY5 434 aa18.9■□□□□ 0.62
RPF1-202ENST00000370656 SUPT16HQ9Y5B9 1047 aaKnown RBP18.9■□□□□ 0.62
RPF1-202ENST00000370656 MAST3O60307 1309 aa18.9■□□□□ 0.62
RPF1-202ENST00000370656 PPIL2Q13356 520 aa18.89■□□□□ 0.61
RPF1-202ENST00000370656 FKBP1CQ5VVH2 108 aa18.89■□□□□ 0.61
RPF1-202ENST00000370656 FBXO33Q7Z6M2 555 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms