RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 LINS1Q8NG48 757 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 BCS1LQ9Y276 419 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 IVNS1ABPQ9Y6Y0 642 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 DUOX2Q9NRD8 1548 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 RALGAPBQ86X10 1494 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 ITSN2Q9NZM3 1697 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 ANKRD44Q8N8A2 993 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 ARHGEF10LQ9HCE6 1279 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 DACT1Q9NYF0 836 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 RFX1P22670 979 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CALML3P27482 149 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 RASA3Q14644 834 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 TTC6Q86TZ1 520 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 HSF2BPO75031 334 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 GNA11P29992 359 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 AK2P54819 239 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CTAGE1Q96RT6 745 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 GPATCH8Q9UKJ3 1502 aaKnown RBP9.66□□□□□ -0.86
ABCA4-201ENST00000370225 YTHDC2Q9H6S0 1430 aaKnown RBP9.66□□□□□ -0.86
ABCA4-201ENST00000370225 A0A1B0GUL7 405 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 SPTLC2O15270 562 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 BMP15O95972 392 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 MXRA7P84157 204 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 GPIHBP1Q8IV16 184 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CCDC114Q96M63 670 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 TRIM6Q9C030 488 aaPredicted RBP9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CCDC171Q6TFL3 1326 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 ERCC3P19447 782 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CYLC1P35663 651 aaPredicted RBP9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CTDSPL2Q05D32 466 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 HS2ST1Q7LGA3 356 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 MAK16Q9BXY0 300 aaKnown RBP9.66□□□□□ -0.86
ABCA4-201ENST00000370225 ZMYM3Q14202 1370 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CCT6AP40227 531 aaKnown RBP9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CEP112Q8N8E3 955 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 SELENOOQ9BVL4 669 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 RPRD2Q5VT52 1461 aaKnown RBP9.66□□□□□ -0.86
ABCA4-201ENST00000370225 ZNF518AQ6AHZ1 1483 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CEP85Q6P2H3 762 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CCDC117Q8IWD4 279 aaPredicted RBP9.66□□□□□ -0.86
ABCA4-201ENST00000370225 NEK11Q8NG66 645 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 IP6K1Q92551 441 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 PLVAPQ9BX97 442 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 CEP83Q9Y592 693 aa9.66□□□□□ -0.86
ABCA4-201ENST00000370225 G2E3Q7L622 706 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 RAB3IL1Q8TBN0 382 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 DTNBO60941 627 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 CCDC25Q86WR0 208 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 FNBP1Q96RU3 617 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 ZNF790Q6PG37 636 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 PIK3AP1Q6ZUJ8 805 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 CCDC155Q8N6L0 562 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 SH2D4AQ9H788 454 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 CTNND2Q9UQB3 1225 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 SH3BP5O60239 455 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 PUM3Q15397 648 aaKnown RBP9.65□□□□□ -0.86
ABCA4-201ENST00000370225 NCAPH2Q6IBW4 605 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 GIMAP7Q8NHV1 300 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 PPM1EQ8WY54 764 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 XAGE2Q96GT9 111 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 LGR6Q9HBX8 967 aa9.65□□□□□ -0.86
ABCA4-201ENST00000370225 FRMD4BQ9Y2L6 1034 aa9.65□□□□□ -0.87
ABCA4-201ENST00000370225 RAD51AP2Q09MP3 1159 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 MAPKAPK5Q8IW41 473 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 SREK1Q8WXA9 508 aaKnown RBP9.64□□□□□ -0.87
ABCA4-201ENST00000370225 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 F13A1P00488 732 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 CKAP4Q07065 602 aaKnown RBP9.64□□□□□ -0.87
ABCA4-201ENST00000370225 KARSQ15046 597 aaKnown RBP9.64□□□□□ -0.87
ABCA4-201ENST00000370225 NIM1KQ8IY84 436 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 TGFBRAP1Q8WUH2 860 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
ABCA4-201ENST00000370225 TBC1D7Q9P0N9 293 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 RASAL2Q9UJF2 1139 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 MAPK8IP1Q9UQF2 711 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 MAP3K19Q56UN5 1328 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 SYT1P21579 422 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 ARHGAP27Q6ZUM4 889 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 PAGR1Q9BTK6 254 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 DDX23Q9BUQ8 820 aaKnown RBP9.64□□□□□ -0.87
ABCA4-201ENST00000370225 RBM28Q9NW13 759 aaKnown RBP9.64□□□□□ -0.87
ABCA4-201ENST00000370225 CGNQ9P2M7 1197 aaKnown RBP9.64□□□□□ -0.87
ABCA4-201ENST00000370225 PPIP5K2O43314 1243 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 PSMC4P43686 418 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 HDAC1Q13547 482 aaPredicted RBP9.64□□□□□ -0.87
ABCA4-201ENST00000370225 RUFY3Q7L099 469 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 TBC1D32Q96NH3 1257 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 TRAPPC8Q9Y2L5 1435 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 CSPG5O95196 566 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 EHBP1Q8NDI1 1231 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 SMCR8Q8TEV9 937 aaPredicted RBP9.64□□□□□ -0.87
ABCA4-201ENST00000370225 ARHGAP45Q92619 1136 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 CCDC87Q9NVE4 849 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 GUCA1BQ9UMX6 200 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 A0A1W2PP64 1363 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 hCG_1642624A0A1W2PR95 340 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 NEMFO60524 1076 aa9.64□□□□□ -0.87
ABCA4-201ENST00000370225 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
ABCA4-201ENST00000370225 MYL10Q9BUA6 226 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms