RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 E7EWF7 191 aa11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 SASH3O75995 380 aa11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 CEBPAP49715 358 aaPredicted RBP11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 TTC39AQ5SRH9 613 aa11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 SLC26A6Q9BXS9 759 aa11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 CCDC175P0C221 793 aa11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 PDIA3P30101 505 aaKnown RBP11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 ZC3H6P61129 1189 aaKnown RBP11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 LINS1Q8NG48 757 aa11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 PCDHA5Q9Y5H7 936 aa11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 FOXN1O15353 648 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 HMGB1P09429 215 aaKnown RBP11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 FILIP1LQ4L180 1135 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 CTR9Q6PD62 1173 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 POLD4Q9HCU8 107 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 CTAGE15A4D2H0 777 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 SOWAHDA6NJG2 315 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 ZNF213O14771 459 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 CTAGE8P0CG41 777 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 H2AFXP16104 143 aaPredicted RBP11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 LIG3P49916 1009 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 SF3A3Q12874 501 aaKnown RBP eCLIP11.92□□□□□ -0.53e-7■□□□□ 9.1
PRPF38B-201ENST00000370021 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 FOXR1Q6PIV2 292 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 CTAGE6Q86UF2 777 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 CTAGE4Q8IX94 777 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 GPR161Q8N6U8 529 aaKnown RBP11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 EID1Q9Y6B2 187 aa11.92□□□□□ -0.5
PRPF38B-201ENST00000370021 LOC102724159A0A0B4J2E5 919 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 POLR2DO15514 142 aaKnown RBP11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 HOXC9P31274 260 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 PWP2Q15269 919 aaKnown RBP11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 TNNI3KQ59H18 835 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 CCDC158Q5M9N0 1113 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 STOX1Q6ZVD7 989 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 RUFY1Q96T51 708 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 FPGT-TNNI3KV9GXZ4 949 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 ENC1O14682 589 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 ARHGAP6O43182 974 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 EPHA10Q5JZY3 1008 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 NBPF6Q5VWK0 638 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 HDXQ7Z353 690 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 LINC00301Q8NCQ3 95 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 NBPF4Q96M43 638 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 PSMB7Q99436 277 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 ZKSCAN3Q9BRR0 538 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 ZBTB3Q9H5J0 574 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 PAG1Q9NWQ8 432 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 SETD1BQ9UPS6 1966 aaKnown RBP11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 METP08581 1390 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 MAP3K5Q99683 1374 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 TADA3O75528 432 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 IPO7O95373 1038 aaKnown RBP11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 NAA16Q6N069 864 aaPredicted RBP11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 FMR1NBQ8N0W7 255 aaPredicted RBP11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 CDC5LQ99459 802 aaKnown RBP11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 AMOTL2Q9Y2J4 779 aa11.91□□□□□ -0.5
PRPF38B-201ENST00000370021 AKAP12Q02952 1782 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 hCG_1642624A0A1W2PR95 340 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 PFKFB2O60825 505 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 SMYD4Q8IYR2 804 aaPredicted RBP11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 VPS16Q9H269 839 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 ABCB6Q9NP58 842 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 SAMSN1Q9NSI8 373 aaKnown RBP11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 DLC1Q96QB1 1528 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 N4BP3O15049 544 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 ATP2C2O75185 946 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 TBC1D8O95759 1140 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 CASP1P29466 404 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 ACTN2P35609 894 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 METAP2P50579 478 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 MPHOSPH8Q99549 860 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 KCNH3Q9ULD8 1083 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 KNDC1Q76NI1 1749 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 A0A1B0GUL7 405 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 CTAGE9A4FU28 777 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 SETQ01105 290 aaPredicted RBP11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 IGSF22Q8N9C0 903 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 SLF1Q9BQI6 1058 aa11.9□□□□□ -0.5
PRPF38B-201ENST00000370021 REREQ9P2R6 1566 aa11.9□□□□□ -0.51
PRPF38B-201ENST00000370021 CPSF1Q10570 1443 aaKnown RBP11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 ZEB2O60315 1214 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 CEP126Q9P2H0 1117 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 KCNJ14Q9UNX9 436 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 FLT4P35916 1363 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 KIAA1328Q86T90 577 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 GOLGA5Q8TBA6 731 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 OSBPL5Q9H0X9 879 aaPredicted RBP11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 YEATS2Q9ULM3 1422 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 ALDH1L1O75891 902 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 ERCC3P19447 782 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 RIN2Q8WYP3 895 aaPredicted RBP11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 RAPGEF4Q8WZA2 1011 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms