RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 MAP2K2P36507 400 aa25.46■■□□□ 1.67
SMNDC1-201ENST00000369592 NOP58Q9Y2X3 529 aaKnown RBP25.46■■□□□ 1.67
SMNDC1-201ENST00000369592 A0A1B0GUL7 405 aa25.45■■□□□ 1.66
SMNDC1-201ENST00000369592 SEMA3EO15041 775 aa25.45■■□□□ 1.66
SMNDC1-201ENST00000369592 FRAT2O75474 233 aaPredicted RBP25.45■■□□□ 1.66
SMNDC1-201ENST00000369592 CRKP46108 304 aa25.45■■□□□ 1.66
SMNDC1-201ENST00000369592 SPDYE2Q495Y8 402 aa25.45■■□□□ 1.66
SMNDC1-201ENST00000369592 CCDC102BQ68D86 513 aa25.45■■□□□ 1.66
SMNDC1-201ENST00000369592 WDR66Q8TBY9 1149 aa25.45■■□□□ 1.66
SMNDC1-201ENST00000369592 AKAP2Q9Y2D5 859 aa25.45■■□□□ 1.66
SMNDC1-201ENST00000369592 SALL1Q9NSC2 1324 aa25.44■■□□□ 1.66
SMNDC1-201ENST00000369592 AOC2O75106 756 aa25.44■■□□□ 1.66
SMNDC1-201ENST00000369592 RGMBQ6NW40 437 aa25.44■■□□□ 1.66
SMNDC1-201ENST00000369592 DEFB129Q9H1M3 183 aa25.44■■□□□ 1.66
SMNDC1-201ENST00000369592 PDS5AQ29RF7 1337 aaKnown RBP25.43■■□□□ 1.66
SMNDC1-201ENST00000369592 CLRN2A0PK11 232 aa25.43■■□□□ 1.66
SMNDC1-201ENST00000369592 MVPQ14764 893 aaKnown RBP25.43■■□□□ 1.66
SMNDC1-201ENST00000369592 CEP85Q6P2H3 762 aa25.43■■□□□ 1.66
SMNDC1-201ENST00000369592 XAGE2Q96GT9 111 aa25.43■■□□□ 1.66
SMNDC1-201ENST00000369592 ZNF70Q9UC06 446 aaPredicted RBP25.43■■□□□ 1.66
SMNDC1-201ENST00000369592 PPP2R3BQ9Y5P8 575 aa25.43■■□□□ 1.66
SMNDC1-201ENST00000369592 SSC5DA1L4H1 1573 aa25.43■■□□□ 1.66
SMNDC1-201ENST00000369592 MYO1BO43795 1136 aa25.42■■□□□ 1.66
SMNDC1-201ENST00000369592 G3BP1Q13283 466 aaKnown RBP eCLIP25.42■■□□□ 1.661e-5■■■■□ 21.3
SMNDC1-201ENST00000369592 PAXIP1Q6ZW49 1069 aaPredicted RBP25.42■■□□□ 1.66
SMNDC1-201ENST00000369592 MOB2Q70IA6 237 aa25.42■■□□□ 1.66
SMNDC1-201ENST00000369592 ZDHHC15Q96MV8 337 aa25.42■■□□□ 1.66
SMNDC1-201ENST00000369592 GNL3LQ9NVN8 582 aaKnown RBP25.42■■□□□ 1.66
SMNDC1-201ENST00000369592 HHIPL2Q6UWX4 724 aa25.41■■□□□ 1.66
SMNDC1-201ENST00000369592 ZIC5Q96T25 663 aa25.41■■□□□ 1.66
SMNDC1-201ENST00000369592 GPR108Q9NPR9 543 aa25.41■■□□□ 1.66
SMNDC1-201ENST00000369592 DENND2AQ9ULE3 1009 aa25.41■■□□□ 1.66
SMNDC1-201ENST00000369592 RGS19P49795 217 aa25.4■■□□□ 1.66
SMNDC1-201ENST00000369592 RBM5P52756 815 aaKnown RBP eCLIP25.4■■□□□ 1.66
SMNDC1-201ENST00000369592 NOGQ13253 232 aa25.4■■□□□ 1.66
SMNDC1-201ENST00000369592 RASGRF1Q13972 1273 aa25.4■■□□□ 1.66
SMNDC1-201ENST00000369592 APOBEC3HQ6NTF7 200 aaKnown RBP25.4■■□□□ 1.66
SMNDC1-201ENST00000369592 TEKT1Q969V4 418 aa25.4■■□□□ 1.66
SMNDC1-201ENST00000369592 TDRD3Q9H7E2 651 aaKnown RBP25.4■■□□□ 1.66
SMNDC1-201ENST00000369592 ZBTB40Q9NUA8 1239 aa25.4■■□□□ 1.66
SMNDC1-201ENST00000369592 MAST3O60307 1309 aa25.39■■□□□ 1.66
SMNDC1-201ENST00000369592 SLC10A3P09131 477 aa25.39■■□□□ 1.66
SMNDC1-201ENST00000369592 CCDC102AQ96A19 550 aa25.39■■□□□ 1.66
SMNDC1-201ENST00000369592 BEGAINQ9BUH8 593 aa25.39■■□□□ 1.66
SMNDC1-201ENST00000369592 GRM1Q13255 1194 aa25.38■■□□□ 1.65
SMNDC1-201ENST00000369592 PDE3AQ14432 1141 aa25.38■■□□□ 1.65
SMNDC1-201ENST00000369592 RASA3Q14644 834 aa25.38■■□□□ 1.65
SMNDC1-201ENST00000369592 MAP3K11Q16584 847 aa25.38■■□□□ 1.65
SMNDC1-201ENST00000369592 LDLRAD1Q5T700 205 aa25.38■■□□□ 1.65
SMNDC1-201ENST00000369592 TEPSINQ96N21 525 aa25.38■■□□□ 1.65
SMNDC1-201ENST00000369592 DDX19BQ9UMR2 479 aa25.38■■□□□ 1.65
SMNDC1-201ENST00000369592 COG6Q9Y2V7 657 aa25.38■■□□□ 1.65
SMNDC1-201ENST00000369592 UBE2Q2LH0YL09 131 aa25.37■■□□□ 1.65
SMNDC1-201ENST00000369592 SURF6O75683 361 aaKnown RBP25.37■■□□□ 1.65
SMNDC1-201ENST00000369592 PRDX5P30044 214 aa25.37■■□□□ 1.65
SMNDC1-201ENST00000369592 ZNF157P51786 506 aaPredicted RBP25.37■■□□□ 1.65
SMNDC1-201ENST00000369592 VEZTQ9HBM0 779 aa25.37■■□□□ 1.65
SMNDC1-201ENST00000369592 AKAP11Q9UKA4 1901 aa25.37■■□□□ 1.65
SMNDC1-201ENST00000369592 ARID4AP29374 1257 aaPredicted RBP25.36■■□□□ 1.65
SMNDC1-201ENST00000369592 NF2P35240 595 aa25.36■■□□□ 1.65
SMNDC1-201ENST00000369592 C20orf194Q5TEA3 1177 aa25.36■■□□□ 1.65
SMNDC1-201ENST00000369592 RASAL3Q86YV0 1011 aa25.36■■□□□ 1.65
SMNDC1-201ENST00000369592 MYH2Q9UKX2 1941 aa25.35■■□□□ 1.65
SMNDC1-201ENST00000369592 TNNI3KQ59H18 835 aa25.35■■□□□ 1.65
SMNDC1-201ENST00000369592 NBPF12Q5TAG4 269 aaPredicted RBP25.35■■□□□ 1.65
SMNDC1-201ENST00000369592 FKBP1CQ5VVH2 108 aa25.35■■□□□ 1.65
SMNDC1-201ENST00000369592 SIRT2Q8IXJ6 389 aa25.35■■□□□ 1.65
SMNDC1-201ENST00000369592 NEUROD6Q96NK8 337 aa25.35■■□□□ 1.65
SMNDC1-201ENST00000369592 FPGT-TNNI3KV9GXZ4 949 aa25.35■■□□□ 1.65
SMNDC1-201ENST00000369592 TNFAIP1Q13829 316 aa25.34■■□□□ 1.65
SMNDC1-201ENST00000369592 HMG20BQ9P0W2 317 aa25.34■■□□□ 1.65
SMNDC1-201ENST00000369592 TSKSQ9UJT2 592 aa25.34■■□□□ 1.65
SMNDC1-201ENST00000369592 DAGLAQ9Y4D2 1042 aa25.34■■□□□ 1.65
SMNDC1-201ENST00000369592 LDHBP07195 334 aaKnown RBP25.33■■□□□ 1.65
SMNDC1-201ENST00000369592 DIXDC1Q155Q3 683 aa25.33■■□□□ 1.65
SMNDC1-201ENST00000369592 SUPT20HL1Q3ZLR7 823 aa25.33■■□□□ 1.65
SMNDC1-201ENST00000369592 CDAN1Q8IWY9 1227 aa25.33■■□□□ 1.65
SMNDC1-201ENST00000369592 RPAP2Q8IXW5 612 aaPredicted RBP25.33■■□□□ 1.65
SMNDC1-201ENST00000369592 ARMC9Q7Z3E5 817 aa25.32■■□□□ 1.64
SMNDC1-201ENST00000369592 ZGPATQ8N5A5 531 aaKnown RBP25.32■■□□□ 1.64
SMNDC1-201ENST00000369592 FZD1Q9UP38 647 aa25.32■■□□□ 1.64
SMNDC1-201ENST00000369592 LAMB1P07942 1786 aa25.31■■□□□ 1.64
SMNDC1-201ENST00000369592 UNCXA6NJT0 531 aa25.31■■□□□ 1.64
SMNDC1-201ENST00000369592 KIF23Q02241 960 aaPredicted RBP25.31■■□□□ 1.64
SMNDC1-201ENST00000369592 FAM83AQ86UY5 434 aa25.31■■□□□ 1.64
SMNDC1-201ENST00000369592 ZNF384Q8TF68 577 aa25.31■■□□□ 1.64
SMNDC1-201ENST00000369592 FAM163AQ96GL9 167 aaPredicted RBP25.31■■□□□ 1.64
SMNDC1-201ENST00000369592 DBNDD2Q9BQY9 259 aa25.31■■□□□ 1.64
SMNDC1-201ENST00000369592 GAKO14976 1311 aa25.31■■□□□ 1.64
SMNDC1-201ENST00000369592 TCP10L2B9ZVM9 353 aa25.3■■□□□ 1.64
SMNDC1-201ENST00000369592 USP2O75604 605 aaPredicted RBP25.3■■□□□ 1.64
SMNDC1-201ENST00000369592 MCAMP43121 646 aa25.3■■□□□ 1.64
SMNDC1-201ENST00000369592 PI16Q6UXB8 463 aa25.3■■□□□ 1.64
SMNDC1-201ENST00000369592 ZNF512BQ96KM6 892 aaPredicted RBP25.3■■□□□ 1.64
SMNDC1-201ENST00000369592 TMEM39BQ9GZU3 492 aa25.3■■□□□ 1.64
SMNDC1-201ENST00000369592 ANGEL1Q9UNK9 670 aaKnown RBP25.3■■□□□ 1.64
SMNDC1-201ENST00000369592 OTOFQ9HC10 1997 aa25.3■■□□□ 1.64
SMNDC1-201ENST00000369592 CACNB3P54284 484 aa25.29■■□□□ 1.64
SMNDC1-201ENST00000369592 TTLL12Q14166 644 aaPredicted RBP25.29■■□□□ 1.64
SMNDC1-201ENST00000369592 SPATA5Q8NB90 893 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms