RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 LMBR1LQ6UX01 489 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 PARD6BQ9BYG5 372 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 DENND2AQ9ULE3 1009 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 EID1Q9Y6B2 187 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 A0A087WZG4 1122 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 CPLX1O14810 134 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 CASQ1P31415 396 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 SYKP43405 635 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 C10orf67Q8IYJ2 551 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 AGLP35573 1532 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 MAST3O60307 1309 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 A0A0U1RQJ8 604 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 EFCAB8A8MWE9 144 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 CDC27P30260 824 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 LMAN1P49257 510 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 FKBP4Q02790 459 aaKnown RBP eCLIP14.18□□□□□ -0.14
PHGDH-201ENST00000369407 PPP2R3AQ06190 1150 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 ATL3Q6DD88 541 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 ATRIPQ8WXE1 791 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 ZNF594Q96JF6 807 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-201ENST00000369407 BPIFA3Q9BQP9 254 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 LOC102724159A0A0B4J2E5 919 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 TFRCP02786 760 aaKnown RBP14.17□□□□□ -0.14
PHGDH-201ENST00000369407 PDE4BQ07343 736 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 PWP2Q15269 919 aaKnown RBP14.17□□□□□ -0.14
PHGDH-201ENST00000369407 TEX2Q8IWB9 1127 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 GPATCH11Q8N954 259 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 CCDC191Q8NCU4 936 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 FBXO18Q8NFZ0 1043 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 INTS13Q9NVM9 706 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 MTF1Q14872 753 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 ZNF827Q17R98 1081 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 ANKRD13DQ6ZTN6 518 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 TRMT44Q8IYL2 757 aaKnown RBP14.17□□□□□ -0.14
PHGDH-201ENST00000369407 DHX58Q96C10 678 aa14.17□□□□□ -0.14
PHGDH-201ENST00000369407 ZNF274Q96GC6 653 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-201ENST00000369407 METTL22Q9BUU2 404 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-201ENST00000369407 UBE2Q2LH0YL09 131 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 H3BQF6 201 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 MYL5Q02045 173 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 WASHC4Q2M389 1173 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 PUF60Q9UHX1 559 aaKnown RBP14.16□□□□□ -0.14
PHGDH-201ENST00000369407 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-201ENST00000369407 ZSCAN26Q16670 478 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 CCDC158Q5M9N0 1113 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 SHC4Q6S5L8 630 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 FOXP4Q8IVH2 680 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-201ENST00000369407 VSTM4Q8IW00 320 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 OSBP2Q969R2 916 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 AGXT2Q9BYV1 514 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 POLR3EQ9NVU0 708 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 NCAPD2Q15021 1401 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 PRC1O43663 620 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 MCM6Q14566 821 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 WWC2Q6AWC2 1192 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 EP400NLQ6ZTU2 488 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 NKX2-3Q8TAU0 364 aa14.16□□□□□ -0.14
PHGDH-201ENST00000369407 PLEKHG1Q9ULL1 1385 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 YEATS4O95619 227 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 KIF23Q02241 960 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-201ENST00000369407 ZMYM1Q5SVZ6 1142 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 TMEM139Q8IV31 216 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 BAG1Q99933 345 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-201ENST00000369407 SUGCTQ9HAC7 445 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 ARFGAP3Q9NP61 516 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 LZTFL1Q9NQ48 299 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 HPS5Q9UPZ3 1129 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 DIP2AQ14689 1571 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 SH3TC1Q8TE82 1336 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 PALLDQ8WX93 1383 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 CMA1P23946 247 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 LONRF3Q496Y0 759 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 LRRC24Q50LG9 513 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 TXLNBQ8N3L3 684 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 PHKBQ93100 1093 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 DSCC1Q9BVC3 393 aa14.15□□□□□ -0.14
PHGDH-201ENST00000369407 PSME1Q06323 249 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 CCDC12Q8WUD4 166 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-201ENST00000369407 CCDC85AQ96PX6 553 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-201ENST00000369407 PHF8Q9UPP1 1060 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 ZSCAN12O43309 604 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 IFIT1P09914 478 aaKnown RBP14.14□□□□□ -0.15
PHGDH-201ENST00000369407 BMP6P22004 513 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 KCNJ6P48051 423 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 ZNF790Q6PG37 636 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 CPLX3Q8WVH0 158 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 ZNF496Q96IT1 587 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-201ENST00000369407 FUT8Q9BYC5 575 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 PCDHA5Q9Y5H7 936 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 IKBKBO14920 756 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 CCP110O43303 1012 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 GRAMD1CQ8IYS0 662 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 HELLSQ9NRZ9 838 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 ADAM21Q9UKJ8 722 aa14.14□□□□□ -0.15
PHGDH-201ENST00000369407 MAP3K9P80192 1104 aa14.13□□□□□ -0.15
PHGDH-201ENST00000369407 MED1Q15648 1581 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-201ENST00000369407 ESCO1Q5FWF5 840 aa14.13□□□□□ -0.15
PHGDH-201ENST00000369407 OLFM4Q6UX06 510 aa14.13□□□□□ -0.15
PHGDH-201ENST00000369407 KDM3BQ7LBC6 1761 aa14.13□□□□□ -0.15
PHGDH-201ENST00000369407 METTL16Q86W50 562 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms