RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 CYP46A1Q9Y6A2 500 aa16.84■□□□□ 0.29
HMGCS2-201ENST00000369406 SEMA3EO15041 775 aa16.83■□□□□ 0.28
HMGCS2-201ENST00000369406 FRAT2O75474 233 aaPredicted RBP16.83■□□□□ 0.28
HMGCS2-201ENST00000369406 CYP7A1P22680 504 aa16.83■□□□□ 0.28
HMGCS2-201ENST00000369406 RPS6KB1P23443 525 aa16.83■□□□□ 0.28
HMGCS2-201ENST00000369406 SCN9AQ15858 1988 aa16.83■□□□□ 0.28
HMGCS2-201ENST00000369406 PDS5AQ29RF7 1337 aaKnown RBP16.83■□□□□ 0.28
HMGCS2-201ENST00000369406 C10orf71Q711Q0 1435 aa16.83■□□□□ 0.28
HMGCS2-201ENST00000369406 ADAMTSL1Q8N6G6 1762 aa16.83■□□□□ 0.28
HMGCS2-201ENST00000369406 ATP2B4P23634 1241 aa16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 TOB2Q14106 344 aaPredicted RBP16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 NBR1Q14596 966 aa16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 LRRC2Q9BYS8 371 aa16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 TACC3Q9Y6A5 838 aa16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 E7EWF7 191 aa16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 SMIM22K7EJ46 135 aa16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 DYNLL1P63167 89 aaKnown RBP16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 MECOMQ03112 1051 aa16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 CUL4AQ13619 759 aa16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 PKP1Q13835 747 aa16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 AIDAQ96BJ3 306 aa16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 NSUN4Q96CB9 384 aaKnown RBP16.82■□□□□ 0.28
HMGCS2-201ENST00000369406 UTRNP46939 3433 aa16.81■□□□□ 0.28
HMGCS2-201ENST00000369406 CD209Q9NNX6 404 aa16.81■□□□□ 0.28
HMGCS2-201ENST00000369406 GSG1L2A8MUP6 293 aa16.81■□□□□ 0.28
HMGCS2-201ENST00000369406 HSP90AA1P07900 732 aaKnown RBP16.81■□□□□ 0.28
HMGCS2-201ENST00000369406 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
HMGCS2-201ENST00000369406 TBC1D10CQ8IV04 446 aa16.81■□□□□ 0.28
HMGCS2-201ENST00000369406 NEK1Q96PY6 1258 aa16.81■□□□□ 0.28
HMGCS2-201ENST00000369406 RIOK1Q9BRS2 568 aaKnown RBP16.81■□□□□ 0.28
HMGCS2-201ENST00000369406 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
HMGCS2-201ENST00000369406 TPCN1Q9ULQ1 816 aa16.81■□□□□ 0.28
HMGCS2-201ENST00000369406 C6orf229H3BNL8 230 aa16.8■□□□□ 0.28
HMGCS2-201ENST00000369406 RIMBP2O15034 1052 aa16.8■□□□□ 0.28
HMGCS2-201ENST00000369406 TIAM2Q8IVF5 1701 aa16.8■□□□□ 0.28
HMGCS2-201ENST00000369406 SNED1Q8TER0 1413 aa16.8■□□□□ 0.28
HMGCS2-201ENST00000369406 INCENPQ9NQS7 918 aa16.8■□□□□ 0.28
HMGCS2-201ENST00000369406 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
HMGCS2-201ENST00000369406 ZNF804AQ7Z570 1209 aa16.8■□□□□ 0.28
HMGCS2-201ENST00000369406 IL1R1P14778 569 aa16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 MCM2P49736 904 aa16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 ME3Q16798 604 aa16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 CHMP5Q9NZZ3 219 aa16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 H0YIN7 160 aa16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 ZBTB7AO95365 584 aa16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 PSMA5P28066 241 aa16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 ALDH1B1P30837 517 aa16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 NFKBIBQ15653 356 aa16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 SDR42E1Q8WUS8 393 aa16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 GPHNQ9NQX3 736 aaPredicted RBP16.79■□□□□ 0.28
HMGCS2-201ENST00000369406 LAMB1P07942 1786 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 ZBTB22O15209 634 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 APPP05067 770 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 EVX2Q03828 476 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 STYK1Q6J9G0 422 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 NAA16Q6N069 864 aaPredicted RBP16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 TMC4Q7Z404 712 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 LIMCH1Q9UPQ0 1083 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 EXOSC10Q01780 885 aaKnown RBP16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 MPNDQ8N594 471 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 NECAB1Q8N987 351 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 C7orf43Q8WVR3 580 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 SLC4A4Q9Y6R1 1079 aa16.78■□□□□ 0.28
HMGCS2-201ENST00000369406 PATL2C9JE40 543 aaKnown RBP16.77■□□□□ 0.28
HMGCS2-201ENST00000369406 KRT32Q14532 448 aa16.77■□□□□ 0.28
HMGCS2-201ENST00000369406 DIXDC1Q155Q3 683 aa16.77■□□□□ 0.28
HMGCS2-201ENST00000369406 Q6ZUG5 572 aa16.77■□□□□ 0.28
HMGCS2-201ENST00000369406 SALL1Q9NSC2 1324 aa16.77■□□□□ 0.28
HMGCS2-201ENST00000369406 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.28
HMGCS2-201ENST00000369406 BRCA1P38398 1863 aaKnown RBP16.77■□□□□ 0.27
HMGCS2-201ENST00000369406 MAGEB6P1A0A0J9YX57 407 aa16.77■□□□□ 0.27
HMGCS2-201ENST00000369406 IMMTQ16891 758 aaKnown RBP16.77■□□□□ 0.27
HMGCS2-201ENST00000369406 ANTXR2P58335 489 aa16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 CTDSPL2Q05D32 466 aa16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 DOK7Q18PE1 504 aa16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 DPP8Q6V1X1 898 aaPredicted RBP16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 MXD3Q9BW11 206 aa16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 ZDHHC9Q9Y397 364 aa16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 NEDD4P46934 1319 aa16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 KCNA3P22001 575 aa16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 ALX1Q15699 326 aa16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 MB21D2Q8IYB1 491 aaPredicted RBP16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 ALDH8A1Q9H2A2 487 aaPredicted RBP16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 KCNQ5Q9NR82 932 aa16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 AATFQ9NY61 560 aaKnown RBP eCLIP16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 CTNNA3Q9UI47 895 aa16.76■□□□□ 0.27
HMGCS2-201ENST00000369406 CCDC125Q86Z20 511 aa16.75■□□□□ 0.27
HMGCS2-201ENST00000369406 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
HMGCS2-201ENST00000369406 ATF5Q9Y2D1 282 aaPredicted RBP16.75■□□□□ 0.27
HMGCS2-201ENST00000369406 NAV1Q8NEY1 1877 aa16.75■□□□□ 0.27
HMGCS2-201ENST00000369406 CYP2D7A0A087X1C5 515 aa16.75■□□□□ 0.27
HMGCS2-201ENST00000369406 ZNF213O14771 459 aa16.75■□□□□ 0.27
HMGCS2-201ENST00000369406 RAB3GAP1Q15042 981 aa16.75■□□□□ 0.27
HMGCS2-201ENST00000369406 DHX32Q7L7V1 743 aaKnown RBP16.75■□□□□ 0.27
HMGCS2-201ENST00000369406 ZMYM6O95789 1325 aa16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 WDR66Q8TBY9 1149 aa16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 TNPO1Q92973 898 aaKnown RBP16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 DPEP1P16444 411 aa16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 R3HDM1Q15032 1099 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms