RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 GNPATO15228 680 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 TYRO3Q06418 890 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 CFAP157Q5JU67 520 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 SMC1BQ8NDV3 1235 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 ARMT1Q9H993 441 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 KIF5AQ12840 1032 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 NDUFB9Q9Y6M9 179 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 RTL9Q8NET4 1388 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 TSPYL6Q8N831 410 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 HAUS7Q99871 368 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 CRCPO75575 148 aa20.47■□□□□ 0.87
SNX27-202ENST00000368841 MBD4O95243 580 aa20.47■□□□□ 0.87
SNX27-202ENST00000368841 DTHD1Q6ZMT9 781 aa20.47■□□□□ 0.87
SNX27-202ENST00000368841 PARP1P09874 1014 aaKnown RBP20.47■□□□□ 0.87
SNX27-202ENST00000368841 ARFGAP3Q9NP61 516 aa20.47■□□□□ 0.87
SNX27-202ENST00000368841 B4E1Z4 1266 aa20.46■□□□□ 0.87
SNX27-202ENST00000368841 PFDN4Q9NQP4 134 aa20.46■□□□□ 0.87
SNX27-202ENST00000368841 KLHL40Q2TBA0 621 aa20.46■□□□□ 0.87
SNX27-202ENST00000368841 GOLGA1Q92805 767 aa20.46■□□□□ 0.87
SNX27-202ENST00000368841 EIF4A2Q14240 407 aaKnown RBP20.46■□□□□ 0.87
SNX27-202ENST00000368841 JDP2Q8WYK2 163 aa20.46■□□□□ 0.87
SNX27-202ENST00000368841 ZNF594Q96JF6 807 aaPredicted RBP20.46■□□□□ 0.87
SNX27-202ENST00000368841 GABPAQ06546 454 aa20.46■□□□□ 0.87
SNX27-202ENST00000368841 KLHDC4Q8TBB5 520 aa20.46■□□□□ 0.87
SNX27-202ENST00000368841 NAP1L3Q99457 506 aaPredicted RBP20.46■□□□□ 0.87
SNX27-202ENST00000368841 HPDP32754 393 aaPredicted RBP20.45■□□□□ 0.86
SNX27-202ENST00000368841 TCP10Q12799 353 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 VPS16Q9H269 839 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 SNX16P57768 344 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 KSR2Q6VAB6 950 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 TMTC2Q8N394 836 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 SMC6Q96SB8 1091 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 NYXQ9GZU5 481 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 ZFYP08048 801 aaPredicted RBP20.45■□□□□ 0.86
SNX27-202ENST00000368841 UVSSAQ2YD98 709 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 PIK3AP1Q6ZUJ8 805 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 KIFC2Q96AC6 838 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
SNX27-202ENST00000368841 ATXN8OSP0DMR3 200 aa20.45■□□□□ 0.86
SNX27-202ENST00000368841 IL15P40933 162 aaPredicted RBP20.45■□□□□ 0.86
SNX27-202ENST00000368841 LEO1Q8WVC0 666 aaPredicted RBP20.45■□□□□ 0.86
SNX27-202ENST00000368841 NCKAP5LQ9HCH0 1330 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 KSR1Q8IVT5 923 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 E7EVH7 732 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 NAA25Q14CX7 972 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 CEP83Q9Y592 693 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 ATP8B2P98198 1209 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 ANAPC4Q9UJX5 808 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 USTQ9Y2C2 406 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 UFL1O94874 794 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 CAPN2P17655 700 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 IQGAP2Q13576 1575 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 hCG_1642624A0A1W2PR95 340 aa20.44■□□□□ 0.86
SNX27-202ENST00000368841 TAF5LO75529 589 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 CTDSPL2Q05D32 466 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 CCDC121Q6ZUS5 278 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 TRIM31Q9BZY9 425 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 DAAM2Q86T65 1068 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 KRT222Q8N1A0 295 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 GTF3C6Q969F1 213 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 MYL10Q9BUA6 226 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 TTLL3Q9Y4R7 772 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 HMGB2P26583 209 aaKnown RBP20.43■□□□□ 0.86
SNX27-202ENST00000368841 AKAP4Q5JQC9 854 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 NCAPH2Q6IBW4 605 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 FAM89AQ96GI7 184 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 POLD1P28340 1107 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 RUFY3Q7L099 469 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 CCDC77Q9BR77 488 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 FRMD4BQ9Y2L6 1034 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 ANKS4BQ8N8V4 417 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 FNBP1Q96RU3 617 aa20.43■□□□□ 0.86
SNX27-202ENST00000368841 ATP2A1O14983 1001 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 GNAQP50148 359 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 WDR7Q9Y4E6 1490 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 CPLX4Q7Z7G2 160 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 PSMB7Q99436 277 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 AATFQ9NY61 560 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNX27-202ENST00000368841 TRAF5O00463 557 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 KRT86O43790 486 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 FAM200AQ8TCP9 573 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 NCOA5Q9HCD5 579 aaKnown RBP20.42■□□□□ 0.86
SNX27-202ENST00000368841 NOD1Q9Y239 953 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 OPA1O60313 960 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 HS2ST1Q7LGA3 356 aa20.42■□□□□ 0.86
SNX27-202ENST00000368841 LMBR1Q8WVP7 490 aa20.41■□□□□ 0.86
SNX27-202ENST00000368841 BICDL2A1A5D9 508 aa20.41■□□□□ 0.86
SNX27-202ENST00000368841 CSPG5O95196 566 aa20.41■□□□□ 0.86
SNX27-202ENST00000368841 GTF2A1P52655 376 aaPredicted RBP20.41■□□□□ 0.86
SNX27-202ENST00000368841 KRT83P78385 493 aa20.41■□□□□ 0.86
SNX27-202ENST00000368841 TPTE2Q6XPS3 522 aa20.41■□□□□ 0.86
SNX27-202ENST00000368841 RBM17Q96I25 401 aaKnown RBP20.41■□□□□ 0.86
SNX27-202ENST00000368841 DAPK3O43293 454 aa20.41■□□□□ 0.86
SNX27-202ENST00000368841 PRDM1O75626 825 aa20.41■□□□□ 0.86
SNX27-202ENST00000368841 SEL1L2Q5TEA6 688 aa20.41■□□□□ 0.86
SNX27-202ENST00000368841 TEX11Q8IYF3 940 aa20.41■□□□□ 0.86
SNX27-202ENST00000368841 IL2RBP14784 551 aa20.41■□□□□ 0.86
SNX27-202ENST00000368841 NOC4LQ9BVI4 516 aaKnown RBP20.41■□□□□ 0.86
SNX27-202ENST00000368841 TXKP42681 527 aa20.4■□□□□ 0.86
SNX27-202ENST00000368841 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms