RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 EXOC1Q9NV70 894 aa14.07□□□□□ -0.16
PTPRK-203ENST00000368207 MROH5Q6ZUA9 1318 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 TMEM87BQ96K49 555 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 TTC12Q9H892 705 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-203ENST00000368207 WDR17Q8IZU2 1322 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 LOC102724428A0A0B4J2F2 783 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 ERLIN1O75477 346 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 EIF6P56537 245 aaKnown RBP14.06□□□□□ -0.16
PTPRK-203ENST00000368207 SIK1P57059 783 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 SCLT1Q96NL6 688 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 RNF17Q9BXT8 1623 aaKnown RBP14.06□□□□□ -0.16
PTPRK-203ENST00000368207 NEMFO60524 1076 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 SSR1P43307 286 aaKnown RBP14.06□□□□□ -0.16
PTPRK-203ENST00000368207 FAM182BQ5T319 152 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 RRP36Q96EU6 259 aaKnown RBP14.06□□□□□ -0.16
PTPRK-203ENST00000368207 CDK12Q9NYV4 1490 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-203ENST00000368207 KCNQ4P56696 695 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 TTC6Q86TZ1 520 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 SIRT2Q8IXJ6 389 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 PHKBQ93100 1093 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 PLIN2Q99541 437 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 TLR7Q9NYK1 1049 aaKnown RBP14.06□□□□□ -0.16
PTPRK-203ENST00000368207 TRPM1Q7Z4N2 1603 aa14.06□□□□□ -0.16
PTPRK-203ENST00000368207 ERBB4Q15303 1308 aa14.05□□□□□ -0.16
PTPRK-203ENST00000368207 PCCAP05165 728 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-203ENST00000368207 FAM193AP78312 1265 aa14.05□□□□□ -0.16
PTPRK-203ENST00000368207 ASIC1P78348 528 aa14.05□□□□□ -0.16
PTPRK-203ENST00000368207 RDXP35241 583 aaKnown RBP14.05□□□□□ -0.16
PTPRK-203ENST00000368207 STX17P56962 302 aa14.05□□□□□ -0.16
PTPRK-203ENST00000368207 GREM2Q9H772 168 aa14.05□□□□□ -0.16
PTPRK-203ENST00000368207 V9GY48 417 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-203ENST00000368207 E7EWF7 191 aa14.05□□□□□ -0.16
PTPRK-203ENST00000368207 GYG1P46976 350 aa14.05□□□□□ -0.16
PTPRK-203ENST00000368207 CENPHQ9H3R5 247 aa14.05□□□□□ -0.16
PTPRK-203ENST00000368207 JDP2Q8WYK2 163 aa14.05□□□□□ -0.16
PTPRK-203ENST00000368207 COPRSQ9NQ92 184 aa14.05□□□□□ -0.16
PTPRK-203ENST00000368207 SMARCC2Q8TAQ2 1214 aa14.04□□□□□ -0.16
PTPRK-203ENST00000368207 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.04□□□□□ -0.16
PTPRK-203ENST00000368207 DBNLQ9UJU6 430 aaKnown RBP14.04□□□□□ -0.16
PTPRK-203ENST00000368207 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
PTPRK-203ENST00000368207 ZNF174Q15697 407 aa14.04□□□□□ -0.16
PTPRK-203ENST00000368207 MAP3K15Q6ZN16 1313 aa14.04□□□□□ -0.16
PTPRK-203ENST00000368207 ME3Q16798 604 aa14.04□□□□□ -0.16
PTPRK-203ENST00000368207 LUZP1Q86V48 1076 aa14.04□□□□□ -0.16
PTPRK-203ENST00000368207 PDCL2Q8N4E4 241 aa14.04□□□□□ -0.16
PTPRK-203ENST00000368207 RMND1Q9NWS8 449 aa14.04□□□□□ -0.16
PTPRK-203ENST00000368207 UNC13BO14795 1591 aa14.04□□□□□ -0.16
PTPRK-203ENST00000368207 BCAMP50895 628 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 SYCP3Q8IZU3 236 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 WDR66Q8TBY9 1149 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 AXIN2Q9Y2T1 843 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 hCG_1642624A0A1W2PR95 340 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 TBCAO75347 108 aaKnown RBP14.03□□□□□ -0.16
PTPRK-203ENST00000368207 CASQ1P31415 396 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 CDC37L1Q7L3B6 337 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 VWA3AA6NCI4 1184 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 SKILP12757 684 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 USP8P40818 1118 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 PPP4R3AQ6IN85 833 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 GIGYF2Q6Y7W6 1299 aaKnown RBP14.03□□□□□ -0.16
PTPRK-203ENST00000368207 VPS36Q86VN1 386 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 GPCPD1Q9NPB8 672 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 ERLIN2O94905 339 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 DIS3L2Q8IYB7 885 aaKnown RBP14.03□□□□□ -0.16
PTPRK-203ENST00000368207 KRI1Q8N9T8 703 aaKnown RBP14.03□□□□□ -0.16
PTPRK-203ENST00000368207 ERMNQ8TAM6 284 aa14.03□□□□□ -0.16
PTPRK-203ENST00000368207 ADORA1P30542 326 aa14.02□□□□□ -0.16
PTPRK-203ENST00000368207 CRKLP46109 303 aaKnown RBP14.02□□□□□ -0.16
PTPRK-203ENST00000368207 PPP4R3BQ5MIZ7 849 aa14.02□□□□□ -0.16
PTPRK-203ENST00000368207 DPP8Q6V1X1 898 aaPredicted RBP14.02□□□□□ -0.16
PTPRK-203ENST00000368207 MAPKAPK5Q8IW41 473 aa14.02□□□□□ -0.16
PTPRK-203ENST00000368207 TM6SF1Q9BZW5 370 aa14.02□□□□□ -0.16
PTPRK-203ENST00000368207 PARP1P09874 1014 aaKnown RBP14.02□□□□□ -0.16
PTPRK-203ENST00000368207 TRIM21P19474 475 aaKnown RBP14.02□□□□□ -0.16
PTPRK-203ENST00000368207 GNA11P29992 359 aa14.02□□□□□ -0.16
PTPRK-203ENST00000368207 SNW1Q13573 536 aaKnown RBP14.02□□□□□ -0.16
PTPRK-203ENST00000368207 HAUS7Q99871 368 aa14.02□□□□□ -0.16
PTPRK-203ENST00000368207 LLPHQ9BRT6 129 aaKnown RBP14.02□□□□□ -0.16
PTPRK-203ENST00000368207 DSCC1Q9BVC3 393 aa14.02□□□□□ -0.16
PTPRK-203ENST00000368207 GADD45BO75293 160 aaPredicted RBP14.02□□□□□ -0.17
PTPRK-203ENST00000368207 IQCEQ6IPM2 695 aa14.02□□□□□ -0.17
PTPRK-203ENST00000368207 MMRN2Q9H8L6 949 aa14.02□□□□□ -0.17
PTPRK-203ENST00000368207 SETD1BQ9UPS6 1966 aaKnown RBP14.02□□□□□ -0.17
PTPRK-203ENST00000368207 SPDYE3A6NKU9 549 aa14.02□□□□□ -0.17
PTPRK-203ENST00000368207 DEXIO95424 95 aa14.02□□□□□ -0.17
PTPRK-203ENST00000368207 APBA3O96018 575 aa14.02□□□□□ -0.17
PTPRK-203ENST00000368207 LETM2Q2VYF4 491 aa14.02□□□□□ -0.17
PTPRK-203ENST00000368207 USPL1Q5W0Q7 1092 aa14.02□□□□□ -0.17
PTPRK-203ENST00000368207 BRINP3Q76B58 766 aa14.02□□□□□ -0.17
PTPRK-203ENST00000368207 PSMA7O14818 248 aa14.01□□□□□ -0.17
PTPRK-203ENST00000368207 USO1O60763 962 aaKnown RBP14.01□□□□□ -0.17
PTPRK-203ENST00000368207 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
PTPRK-203ENST00000368207 PDE6AP16499 860 aa14.01□□□□□ -0.17
PTPRK-203ENST00000368207 DTHD1Q6ZMT9 781 aa14.01□□□□□ -0.17
PTPRK-203ENST00000368207 FAM114A1Q8IWE2 563 aa14.01□□□□□ -0.17
PTPRK-203ENST00000368207 RBM28Q9NW13 759 aaKnown RBP14.01□□□□□ -0.17
PTPRK-203ENST00000368207 HSPD1P10809 573 aaKnown RBP14.01□□□□□ -0.17
PTPRK-203ENST00000368207 GNG11P61952 73 aa14.01□□□□□ -0.17
PTPRK-203ENST00000368207 RASEFQ8IZ41 740 aa14.01□□□□□ -0.17
PTPRK-203ENST00000368207 STK32BQ9NY57 414 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms