RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PSME4Q14997 1843 aa13.68□□□□□ -0.22
USF1-201ENST00000368019 TRIM6-TRIM34B2RNG4 842 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 H7C1D1 291 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 PSMD14O00487 310 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 IRS4O14654 1257 aaPredicted RBP13.67□□□□□ -0.22
USF1-201ENST00000368019 RPS8P62241 208 aaKnown RBP13.67□□□□□ -0.22
USF1-201ENST00000368019 GPSM2P81274 684 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 SLC4A10Q6U841 1118 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
USF1-201ENST00000368019 USP48Q86UV5 1035 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 KIF1BPQ96EK5 621 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 ABHD8Q96I13 439 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 DBNDD1Q9H9R9 158 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 SH2B1Q9NRF2 756 aaPredicted RBP13.67□□□□□ -0.22
USF1-201ENST00000368019 LIMCH1Q9UPQ0 1083 aa13.67□□□□□ -0.22
USF1-201ENST00000368019 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
USF1-201ENST00000368019 PNMA6EA0A0J9YXQ4 647 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 F6X3S4 739 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 APBB1O00213 710 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 UBTFL1P0CB47 393 aaPredicted RBP13.66□□□□□ -0.22
USF1-201ENST00000368019 GRM1Q13255 1194 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 ZBTB38Q8NAP3 1195 aaPredicted RBP13.66□□□□□ -0.22
USF1-201ENST00000368019 TBC1D16Q8TBP0 767 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 PI4K2BQ8TCG2 481 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 RUFY2Q8WXA3 655 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 FUCA2Q9BTY2 467 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 PHAXQ9H814 394 aaKnown RBP13.66□□□□□ -0.22
USF1-201ENST00000368019 KCNQ5Q9NR82 932 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 HDAC5Q9UQL6 1122 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
USF1-201ENST00000368019 C6orf229H3BNL8 230 aa13.65□□□□□ -0.22
USF1-201ENST00000368019 RIMBP2O15034 1052 aa13.65□□□□□ -0.22
USF1-201ENST00000368019 F13A1P00488 732 aa13.65□□□□□ -0.22
USF1-201ENST00000368019 EGFRP00533 1210 aa13.65□□□□□ -0.22
USF1-201ENST00000368019 RPS12P25398 132 aaKnown RBP13.65□□□□□ -0.22
USF1-201ENST00000368019 FKBP5Q13451 457 aaPredicted RBP13.65□□□□□ -0.22
USF1-201ENST00000368019 MTX1Q13505 466 aa13.65□□□□□ -0.22
USF1-201ENST00000368019 SAMD7Q7Z3H4 446 aa13.65□□□□□ -0.22
USF1-201ENST00000368019 RILPL2Q969X0 211 aa13.65□□□□□ -0.22
USF1-201ENST00000368019 BEGAINQ9BUH8 593 aa13.65□□□□□ -0.22
USF1-201ENST00000368019 LSG1Q9H089 658 aaKnown RBP13.65□□□□□ -0.22
USF1-201ENST00000368019 USP44Q9H0E7 712 aa13.65□□□□□ -0.22
USF1-201ENST00000368019 PODXL2Q9NZ53 605 aa13.65□□□□□ -0.22
USF1-201ENST00000368019 LRRFIP2Q9Y608 721 aaKnown RBP13.65□□□□□ -0.22
USF1-201ENST00000368019 STX6O43752 255 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 ECE2O60344 883 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 VPS53Q5VIR6 699 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 DLK2Q6UY11 383 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 RNF214Q8ND24 703 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 RHPN1Q8TCX5 695 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 EYA3Q99504 573 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 SEC31BQ9NQW1 1179 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 SNX14Q9Y5W7 946 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 MYH3P11055 1940 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 ELP1O95163 1332 aa13.64□□□□□ -0.23
USF1-201ENST00000368019 GOLGA6L6A8MZA4 724 aa13.63□□□□□ -0.23
USF1-201ENST00000368019 CA12O43570 354 aa13.63□□□□□ -0.23
USF1-201ENST00000368019 KDM4AO75164 1064 aa13.63□□□□□ -0.23
USF1-201ENST00000368019 GLRX3O76003 335 aaKnown RBP13.63□□□□□ -0.23
USF1-201ENST00000368019 PCCAP05165 728 aaPredicted RBP13.63□□□□□ -0.23
USF1-201ENST00000368019 VIL1P09327 827 aaKnown RBP13.63□□□□□ -0.23
USF1-201ENST00000368019 NOLC1Q14978 699 aaKnown RBP eCLIP13.63□□□□□ -0.23
USF1-201ENST00000368019 DOK7Q18PE1 504 aa13.63□□□□□ -0.23
USF1-201ENST00000368019 CCDC191Q8NCU4 936 aa13.63□□□□□ -0.23
USF1-201ENST00000368019 ZIC5Q96T25 663 aa13.63□□□□□ -0.23
USF1-201ENST00000368019 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
USF1-201ENST00000368019 ZNF408Q9H9D4 720 aa13.63□□□□□ -0.23
USF1-201ENST00000368019 SNRKQ9NRH2 765 aa13.63□□□□□ -0.23
USF1-201ENST00000368019 SMC3Q9UQE7 1217 aa13.63□□□□□ -0.23
USF1-201ENST00000368019 ZNF609O15014 1411 aa13.63□□□□□ -0.23
USF1-201ENST00000368019 HIP1O00291 1037 aa13.62□□□□□ -0.23
USF1-201ENST00000368019 GADD45BO75293 160 aaPredicted RBP13.62□□□□□ -0.23
USF1-201ENST00000368019 TBC1D10BQ4KMP7 808 aaPredicted RBP13.62□□□□□ -0.23
USF1-201ENST00000368019 MYD88Q99836 296 aa13.62□□□□□ -0.23
USF1-201ENST00000368019 ALDH8A1Q9H2A2 487 aaPredicted RBP13.62□□□□□ -0.23
USF1-201ENST00000368019 DIAPH3Q9NSV4 1193 aa13.62□□□□□ -0.23
USF1-201ENST00000368019 FAM13BQ9NYF5 915 aa13.62□□□□□ -0.23
USF1-201ENST00000368019 TSKSQ9UJT2 592 aa13.62□□□□□ -0.23
USF1-201ENST00000368019 PDE8AO60658 829 aa13.61□□□□□ -0.23
USF1-201ENST00000368019 ADCY5O95622 1261 aa13.61□□□□□ -0.23
USF1-201ENST00000368019 HSP90B1P14625 803 aaKnown RBP13.61□□□□□ -0.23
USF1-201ENST00000368019 SYT1P21579 422 aa13.61□□□□□ -0.23
USF1-201ENST00000368019 AK2P54819 239 aa13.61□□□□□ -0.23
USF1-201ENST00000368019 HUNKP57058 714 aa13.61□□□□□ -0.23
USF1-201ENST00000368019 NOGQ13253 232 aa13.61□□□□□ -0.23
USF1-201ENST00000368019 UTP14CQ5TAP6 766 aaKnown RBP13.61□□□□□ -0.23
USF1-201ENST00000368019 KRT26Q7Z3Y9 468 aa13.61□□□□□ -0.23
USF1-201ENST00000368019 ERC1Q8IUD2 1116 aa13.61□□□□□ -0.23
USF1-201ENST00000368019 METTL22Q9BUU2 404 aaPredicted RBP13.61□□□□□ -0.23
USF1-201ENST00000368019 UPF3BQ9BZI7 483 aaKnown RBP13.61□□□□□ -0.23
USF1-201ENST00000368019 ZC3H12CQ9C0D7 883 aaKnown RBP13.61□□□□□ -0.23
USF1-201ENST00000368019 ZNF646O15015 1829 aaPredicted RBP13.61□□□□□ -0.23
USF1-201ENST00000368019 AKAP11Q9UKA4 1901 aa13.6□□□□□ -0.23
USF1-201ENST00000368019 FAM155AB1AL88 458 aaPredicted RBP13.6□□□□□ -0.23
USF1-201ENST00000368019 SYCP1Q15431 976 aa13.6□□□□□ -0.23
USF1-201ENST00000368019 CCDC152Q4G0S7 254 aa13.6□□□□□ -0.23
USF1-201ENST00000368019 RBM26Q5T8P6 1007 aaKnown RBP13.6□□□□□ -0.23
USF1-201ENST00000368019 JARID2Q92833 1246 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms