RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 PYGBP11216 843 aa12.14□□□□□ -0.47
NUP43-202ENST00000367402 PHKA1P46020 1223 aa12.14□□□□□ -0.47
NUP43-202ENST00000367402 AACSQ86V21 672 aa12.14□□□□□ -0.47
NUP43-202ENST00000367402 KIAA0825Q8IV33 1275 aa12.14□□□□□ -0.47
NUP43-202ENST00000367402 CLASRPQ8N2M8 674 aaKnown RBP12.14□□□□□ -0.47
NUP43-202ENST00000367402 OGFOD1Q8N543 542 aa12.14□□□□□ -0.47
NUP43-202ENST00000367402 GMLQ99445 158 aa12.14□□□□□ -0.47
NUP43-202ENST00000367402 CCDC8Q9H0W5 538 aaPredicted RBP12.14□□□□□ -0.47
NUP43-202ENST00000367402 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
NUP43-202ENST00000367402 ADARB2Q9NS39 739 aaKnown RBP12.14□□□□□ -0.47
NUP43-202ENST00000367402 FAM205AQ6ZU69 1335 aa12.13□□□□□ -0.47
NUP43-202ENST00000367402 F8W031 263 aaPredicted RBP12.13□□□□□ -0.47
NUP43-202ENST00000367402 TBC1D10BQ4KMP7 808 aaPredicted RBP12.13□□□□□ -0.47
NUP43-202ENST00000367402 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
NUP43-202ENST00000367402 MFSD14BQ5SR56 506 aa12.13□□□□□ -0.47
NUP43-202ENST00000367402 USP50Q70EL3 339 aaPredicted RBP12.13□□□□□ -0.47
NUP43-202ENST00000367402 SAMD7Q7Z3H4 446 aa12.13□□□□□ -0.47
NUP43-202ENST00000367402 CERS5Q8N5B7 392 aa12.13□□□□□ -0.47
NUP43-202ENST00000367402 EAF2Q96CJ1 260 aaPredicted RBP12.13□□□□□ -0.47
NUP43-202ENST00000367402 DBNDD2Q9BQY9 259 aa12.13□□□□□ -0.47
NUP43-202ENST00000367402 DCTPP1Q9H773 170 aa12.13□□□□□ -0.47
NUP43-202ENST00000367402 WDR90Q96KV7 1748 aa12.13□□□□□ -0.47
NUP43-202ENST00000367402 ZNF609O15014 1411 aa12.12□□□□□ -0.47
NUP43-202ENST00000367402 SEMA3EO15041 775 aa12.12□□□□□ -0.47
NUP43-202ENST00000367402 IFIT2P09913 472 aaKnown RBP12.12□□□□□ -0.47
NUP43-202ENST00000367402 FKBP1AP62942 108 aaKnown RBP12.12□□□□□ -0.47
NUP43-202ENST00000367402 TTC39AQ5SRH9 613 aa12.12□□□□□ -0.47
NUP43-202ENST00000367402 TBC1D22AQ8WUA7 517 aa12.12□□□□□ -0.47
NUP43-202ENST00000367402 LRRCC1Q9C099 1032 aa12.12□□□□□ -0.47
NUP43-202ENST00000367402 TLR7Q9NYK1 1049 aaKnown RBP12.12□□□□□ -0.47
NUP43-202ENST00000367402 HDAC9Q9UKV0 1011 aa12.12□□□□□ -0.47
NUP43-202ENST00000367402 DENND2AQ9ULE3 1009 aa12.12□□□□□ -0.47
NUP43-202ENST00000367402 A0A1B0GUL6 1792 aa12.12□□□□□ -0.47
NUP43-202ENST00000367402 SMARCA5O60264 1052 aaPredicted RBP12.11□□□□□ -0.47
NUP43-202ENST00000367402 ST18O60284 1047 aa12.11□□□□□ -0.47
NUP43-202ENST00000367402 UQCRFS1P1P0C7P4 283 aa12.11□□□□□ -0.47
NUP43-202ENST00000367402 ZNF280AP59817 542 aaPredicted RBP12.11□□□□□ -0.47
NUP43-202ENST00000367402 KIF4BQ2VIQ3 1234 aa12.11□□□□□ -0.47
NUP43-202ENST00000367402 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
NUP43-202ENST00000367402 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
NUP43-202ENST00000367402 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
NUP43-202ENST00000367402 WDR66Q8TBY9 1149 aa12.11□□□□□ -0.47
NUP43-202ENST00000367402 TRPM4Q8TD43 1214 aa12.11□□□□□ -0.47
NUP43-202ENST00000367402 RWDD1Q9H446 243 aaPredicted RBP12.11□□□□□ -0.47
NUP43-202ENST00000367402 MYOZ2Q9NPC6 264 aa12.11□□□□□ -0.47
NUP43-202ENST00000367402 DBNLQ9UJU6 430 aaKnown RBP12.11□□□□□ -0.47
NUP43-202ENST00000367402 EGFRP00533 1210 aa12.1□□□□□ -0.47
NUP43-202ENST00000367402 MMP14P50281 582 aa12.1□□□□□ -0.47
NUP43-202ENST00000367402 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP43-202ENST00000367402 HIRAP54198 1017 aaPredicted RBP12.1□□□□□ -0.47
NUP43-202ENST00000367402 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
NUP43-202ENST00000367402 RASGRF1Q13972 1273 aa12.1□□□□□ -0.47
NUP43-202ENST00000367402 SPATA5Q8NB90 893 aa12.1□□□□□ -0.47
NUP43-202ENST00000367402 TTF2Q9UNY4 1162 aaKnown RBP12.1□□□□□ -0.47
NUP43-202ENST00000367402 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
NUP43-202ENST00000367402 SNPHO15079 494 aa12.09□□□□□ -0.47
NUP43-202ENST00000367402 ARID4AP29374 1257 aaPredicted RBP12.09□□□□□ -0.47
NUP43-202ENST00000367402 C1QTNF8P60827 252 aa12.09□□□□□ -0.47
NUP43-202ENST00000367402 SCARF1Q14162 830 aa12.09□□□□□ -0.47
NUP43-202ENST00000367402 GRIK5Q16478 980 aa12.09□□□□□ -0.47
NUP43-202ENST00000367402 MAP1SQ66K74 1059 aaPredicted RBP12.09□□□□□ -0.47
NUP43-202ENST00000367402 GCC1Q96CN9 775 aa12.09□□□□□ -0.47
NUP43-202ENST00000367402 SNRKQ9NRH2 765 aa12.09□□□□□ -0.47
NUP43-202ENST00000367402 HMG20BQ9P0W2 317 aa12.09□□□□□ -0.47
NUP43-202ENST00000367402 MCAMP43121 646 aa12.08□□□□□ -0.48
NUP43-202ENST00000367402 FSTL1Q12841 308 aa12.08□□□□□ -0.48
NUP43-202ENST00000367402 DLGAP5Q15398 846 aa12.08□□□□□ -0.48
NUP43-202ENST00000367402 PI16Q6UXB8 463 aa12.08□□□□□ -0.48
NUP43-202ENST00000367402 CNTROBQ8N137 903 aa12.08□□□□□ -0.48
NUP43-202ENST00000367402 ZGPATQ8N5A5 531 aaKnown RBP12.08□□□□□ -0.48
NUP43-202ENST00000367402 ZC3H15Q8WU90 426 aaKnown RBP12.08□□□□□ -0.48
NUP43-202ENST00000367402 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.08□□□□□ -0.48
NUP43-202ENST00000367402 ABCF2Q9UG63 623 aa12.08□□□□□ -0.48
NUP43-202ENST00000367402 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
NUP43-202ENST00000367402 SCN4AP35499 1836 aa12.07□□□□□ -0.48
NUP43-202ENST00000367402 IGHDP01880 384 aa12.07□□□□□ -0.48
NUP43-202ENST00000367402 LDHBP07195 334 aaKnown RBP12.07□□□□□ -0.48
NUP43-202ENST00000367402 NBPF9Q3BBW0 867 aa12.07□□□□□ -0.48
NUP43-202ENST00000367402 CFAP100Q494V2 611 aa12.07□□□□□ -0.48
NUP43-202ENST00000367402 ANKRD45Q5TZF3 282 aa12.07□□□□□ -0.48
NUP43-202ENST00000367402 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
NUP43-202ENST00000367402 TBC1D9Q6ZT07 1266 aa12.07□□□□□ -0.48
NUP43-202ENST00000367402 DCPSQ96C86 337 aaKnown RBP12.07□□□□□ -0.48
NUP43-202ENST00000367402 ZNF512BQ96KM6 892 aaPredicted RBP12.07□□□□□ -0.48
NUP43-202ENST00000367402 SERPINA10Q9UK55 444 aa12.07□□□□□ -0.48
NUP43-202ENST00000367402 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
NUP43-202ENST00000367402 COL1A1P02452 1464 aaPredicted RBP12.07□□□□□ -0.48
NUP43-202ENST00000367402 PDS5AQ29RF7 1337 aaKnown RBP12.07□□□□□ -0.48
NUP43-202ENST00000367402 SALL1Q9NSC2 1324 aa12.07□□□□□ -0.48
NUP43-202ENST00000367402 WNT10BO00744 389 aa12.06□□□□□ -0.48
NUP43-202ENST00000367402 NEFLP07196 543 aa12.06□□□□□ -0.48
NUP43-202ENST00000367402 PRDX5P30044 214 aa12.06□□□□□ -0.48
NUP43-202ENST00000367402 CRKP46108 304 aa12.06□□□□□ -0.48
NUP43-202ENST00000367402 ANGEL2Q5VTE6 544 aaKnown RBP12.06□□□□□ -0.48
NUP43-202ENST00000367402 B4GALNT3Q6L9W6 998 aa12.06□□□□□ -0.48
NUP43-202ENST00000367402 ERICH6Q7L0X2 663 aa12.06□□□□□ -0.48
NUP43-202ENST00000367402 LRP2BPQ9P2M1 347 aa12.06□□□□□ -0.48
NUP43-202ENST00000367402 PGAP2Q9UHJ9 254 aa12.06□□□□□ -0.48
NUP43-202ENST00000367402 PCDHAC2Q9Y5I4 1007 aa12.06□□□□□ -0.48
NUP43-202ENST00000367402 MAST3O60307 1309 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms