RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 ADCY10Q96PN6 1610 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 USP19O94966 1318 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 AKR1B10O60218 316 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 GIGYF2Q6Y7W6 1299 aaKnown RBP10.21□□□□□ -0.77
SYNE1-205ENST00000367251 OGFOD1Q8N543 542 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 TCEANC2Q96MN5 208 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 FERMT1Q9BQL6 677 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 TTC12Q9H892 705 aaPredicted RBP10.21□□□□□ -0.77
SYNE1-205ENST00000367251 JADE2Q9NQC1 790 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 ZFYVE16Q7Z3T8 1539 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 GSTTP1A0A1W2PQM5 241 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 POLR3GO15318 223 aaPredicted RBP10.21□□□□□ -0.77
SYNE1-205ENST00000367251 IDEP14735 1019 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 DYDC1Q8WWB3 177 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 SELENOOQ9BVL4 669 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 PLVAPQ9BX97 442 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 TSGA10Q9BZW7 698 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 OGFRQ9NZT2 677 aa10.21□□□□□ -0.77
SYNE1-205ENST00000367251 TBCAO75347 108 aaKnown RBP10.21□□□□□ -0.78
SYNE1-205ENST00000367251 RFC4P35249 363 aa10.21□□□□□ -0.78
SYNE1-205ENST00000367251 USP37Q86T82 979 aa10.21□□□□□ -0.78
SYNE1-205ENST00000367251 IQUBQ8NA54 791 aa10.21□□□□□ -0.78
SYNE1-205ENST00000367251 ERO1AQ96HE7 468 aa10.21□□□□□ -0.78
SYNE1-205ENST00000367251 GOLGA6L10A0A0M3HER8 536 aa10.21□□□□□ -0.78
SYNE1-205ENST00000367251 PTGS1P23219 599 aa10.21□□□□□ -0.78
SYNE1-205ENST00000367251 ZNF804AQ7Z570 1209 aa10.21□□□□□ -0.78
SYNE1-205ENST00000367251 CERS3Q8IU89 383 aa10.21□□□□□ -0.78
SYNE1-205ENST00000367251 PLEKHF1Q96S99 279 aa10.21□□□□□ -0.78
SYNE1-205ENST00000367251 KIF1BO60333 1816 aa10.21□□□□□ -0.78
SYNE1-205ENST00000367251 ZNF790Q6PG37 636 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 BBXQ8WY36 941 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-205ENST00000367251 TBC1D5Q92609 795 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 MARCKSP29966 332 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-205ENST00000367251 UBE2Q2Q8WVN8 375 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 LRRC59Q96AG4 307 aaKnown RBP10.2□□□□□ -0.78
SYNE1-205ENST00000367251 DSCC1Q9BVC3 393 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 ZNF408Q9H9D4 720 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 HDAC9Q9UKV0 1011 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 IRS4O14654 1257 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-205ENST00000367251 TOM1O60784 492 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 GNA11P29992 359 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 AFMP43652 599 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 CUTAO60888 179 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 DEXIO95424 95 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 CHRNA2Q15822 529 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 NBPF6Q5VWK0 638 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 ISM2Q6H9L7 571 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 NBPF5PQ86XG9 351 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-205ENST00000367251 SSH3Q8TE77 659 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 APPBP2Q92624 585 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 JARID2Q92833 1246 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-205ENST00000367251 NBPF4Q96M43 638 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 CDCA7Q9BWT1 371 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-205ENST00000367251 PUF60Q9UHX1 559 aaKnown RBP10.2□□□□□ -0.78
SYNE1-205ENST00000367251 KBTBD3Q8NAB2 608 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 JDP2Q8WYK2 163 aa10.2□□□□□ -0.78
SYNE1-205ENST00000367251 PARP10Q53GL7 1025 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 RBM26Q5T8P6 1007 aaKnown RBP10.19□□□□□ -0.78
SYNE1-205ENST00000367251 DZIP3Q86Y13 1208 aaKnown RBP10.19□□□□□ -0.78
SYNE1-205ENST00000367251 TIGD1Q96MW7 591 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 IFNKQ9P0W0 207 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 KDRP35968 1356 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 IQGAP3Q86VI3 1631 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 LPXNO60711 386 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 ANO1Q5XXA6 986 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 RAB11FIP4Q86YS3 637 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 PPM1EQ8WY54 764 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 LRRC45Q96CN5 670 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 RRP36Q96EU6 259 aaKnown RBP10.19□□□□□ -0.78
SYNE1-205ENST00000367251 DENND2AQ9ULE3 1009 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 OTUD7AQ8TE49 926 aaPredicted RBP10.19□□□□□ -0.78
SYNE1-205ENST00000367251 V9GYY5 206 aaPredicted RBP10.19□□□□□ -0.78
SYNE1-205ENST00000367251 ATP5JP18859 108 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 DHX58Q96C10 678 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 SETDB2Q96T68 719 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 SLC52A2Q9HAB3 445 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 PRDM10Q9NQV6 1147 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 TET3O43151 1660 aa10.19□□□□□ -0.78
SYNE1-205ENST00000367251 TMEM2Q9UHN6 1383 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 TMCO5BA8MYB1 307 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 FERP16591 822 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 GTF2F1P35269 517 aaKnown RBP eCLIP10.18□□□□□ -0.78
SYNE1-205ENST00000367251 PLCD1P51178 756 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 ZNF75DP51815 510 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 KIF5AQ12840 1032 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 HLTFQ14527 1009 aaKnown RBP eCLIP10.18□□□□□ -0.78
SYNE1-205ENST00000367251 SPECC1LQ69YQ0 1117 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 OSBPL3Q9H4L5 887 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 RASAL2Q9UJF2 1139 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 RGS12O14924 1447 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 IBTKQ9P2D0 1353 aaPredicted RBP10.18□□□□□ -0.78
SYNE1-205ENST00000367251 EIF4A1P60842 406 aaKnown RBP10.18□□□□□ -0.78
SYNE1-205ENST00000367251 PPP1R9BQ96SB3 815 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 STMN4Q9H169 189 aaPredicted RBP10.18□□□□□ -0.78
SYNE1-205ENST00000367251 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 NAPAP54920 295 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 NCBP1Q09161 790 aaKnown RBP10.18□□□□□ -0.78
SYNE1-205ENST00000367251 STK24Q9Y6E0 443 aa10.18□□□□□ -0.78
SYNE1-205ENST00000367251 AKR1B15C9JRZ8 316 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms