RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CFHR5Q9BXR6 569 aa18.54■□□□□ 0.56
CTSD-202ENST00000367196 ZNF70Q9UC06 446 aaPredicted RBP18.54■□□□□ 0.56
CTSD-202ENST00000367196 FBXO3Q9UK99 471 aa18.54■□□□□ 0.56
CTSD-202ENST00000367196 SUGT1Q9Y2Z0 365 aa18.54■□□□□ 0.56
CTSD-202ENST00000367196 EYA2O00167 538 aa18.53■□□□□ 0.56
CTSD-202ENST00000367196 SLC5A1P13866 664 aa18.53■□□□□ 0.56
CTSD-202ENST00000367196 CHAF1AQ13111 956 aaPredicted RBP18.53■□□□□ 0.56
CTSD-202ENST00000367196 ANKRD13AQ8IZ07 590 aa18.53■□□□□ 0.56
CTSD-202ENST00000367196 KLHDC4Q8TBB5 520 aa18.53■□□□□ 0.56
CTSD-202ENST00000367196 TEKT1Q969V4 418 aa18.53■□□□□ 0.56
CTSD-202ENST00000367196 TMOD2Q9NZR1 351 aa18.53■□□□□ 0.56
CTSD-202ENST00000367196 TBC1D8O95759 1140 aa18.52■□□□□ 0.56
CTSD-202ENST00000367196 NBPF12Q5TAG4 269 aaPredicted RBP18.52■□□□□ 0.56
CTSD-202ENST00000367196 ZNF296Q8WUU4 475 aaPredicted RBP18.52■□□□□ 0.56
CTSD-202ENST00000367196 LPIN2Q92539 896 aa18.52■□□□□ 0.56
CTSD-202ENST00000367196 WNK4Q96J92 1243 aa18.52■□□□□ 0.56
CTSD-202ENST00000367196 TDRD3Q9H7E2 651 aaKnown RBP18.52■□□□□ 0.56
CTSD-202ENST00000367196 IQSEC3Q9UPP2 1182 aaPredicted RBP18.52■□□□□ 0.56
CTSD-202ENST00000367196 FGFR2P21802 821 aa18.51■□□□□ 0.55
CTSD-202ENST00000367196 OTUD7BQ6GQQ9 843 aa18.51■□□□□ 0.55
CTSD-202ENST00000367196 MRIQ9BWK5 157 aa18.51■□□□□ 0.55
CTSD-202ENST00000367196 NOB1Q9ULX3 412 aaKnown RBP18.51■□□□□ 0.55
CTSD-202ENST00000367196 GPR25O00155 361 aa18.5■□□□□ 0.55
CTSD-202ENST00000367196 CIAO1O76071 339 aa18.5■□□□□ 0.55
CTSD-202ENST00000367196 BCAMP50895 628 aa18.5■□□□□ 0.55
CTSD-202ENST00000367196 HOOK2Q96ED9 719 aa18.5■□□□□ 0.55
CTSD-202ENST00000367196 FZD1Q9UP38 647 aa18.5■□□□□ 0.55
CTSD-202ENST00000367196 TCP10L2B9ZVM9 353 aa18.49■□□□□ 0.55
CTSD-202ENST00000367196 RFX5P48382 616 aaPredicted RBP18.49■□□□□ 0.55
CTSD-202ENST00000367196 WDR66Q8TBY9 1149 aa18.49■□□□□ 0.55
CTSD-202ENST00000367196 CLMNQ96JQ2 1002 aa18.49■□□□□ 0.55
CTSD-202ENST00000367196 GNL3LQ9NVN8 582 aaKnown RBP18.49■□□□□ 0.55
CTSD-202ENST00000367196 OTOFQ9HC10 1997 aa18.49■□□□□ 0.55
CTSD-202ENST00000367196 AOX1Q06278 1338 aa18.49■□□□□ 0.55
CTSD-202ENST00000367196 FKTNO75072 461 aa18.48■□□□□ 0.55
CTSD-202ENST00000367196 USP2O75604 605 aaPredicted RBP18.48■□□□□ 0.55
CTSD-202ENST00000367196 IFNL1Q8IU54 200 aa18.48■□□□□ 0.55
CTSD-202ENST00000367196 ARHGAP45Q92619 1136 aa18.48■□□□□ 0.55
CTSD-202ENST00000367196 ZDHHC15Q96MV8 337 aa18.48■□□□□ 0.55
CTSD-202ENST00000367196 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.48■□□□□ 0.55
CTSD-202ENST00000367196 CEP126Q9P2H0 1117 aa18.48■□□□□ 0.55
CTSD-202ENST00000367196 IL15P40933 162 aaPredicted RBP18.47■□□□□ 0.55
CTSD-202ENST00000367196 FKBP1CQ5VVH2 108 aa18.47■□□□□ 0.55
CTSD-202ENST00000367196 HHIPL2Q6UWX4 724 aa18.47■□□□□ 0.55
CTSD-202ENST00000367196 CSADQ9Y600 493 aa18.47■□□□□ 0.55
CTSD-202ENST00000367196 RARSP54136 660 aaKnown RBP18.46■□□□□ 0.55
CTSD-202ENST00000367196 ATP2B3Q16720 1220 aa18.46■□□□□ 0.55
CTSD-202ENST00000367196 ATG9AQ7Z3C6 839 aa18.46■□□□□ 0.55
CTSD-202ENST00000367196 FAM83AQ86UY5 434 aa18.46■□□□□ 0.55
CTSD-202ENST00000367196 TEPSINQ96N21 525 aa18.46■□□□□ 0.55
CTSD-202ENST00000367196 TMEM39BQ9GZU3 492 aa18.46■□□□□ 0.55
CTSD-202ENST00000367196 SIL1Q9H173 461 aa18.46■□□□□ 0.55
CTSD-202ENST00000367196 RPAP1Q9BWH6 1393 aaPredicted RBP18.45■□□□□ 0.54
CTSD-202ENST00000367196 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
CTSD-202ENST00000367196 GNAI3P08754 354 aa18.45■□□□□ 0.54
CTSD-202ENST00000367196 GRIK5Q16478 980 aa18.45■□□□□ 0.54
CTSD-202ENST00000367196 OPTNQ96CV9 577 aa18.45■□□□□ 0.54
CTSD-202ENST00000367196 HPS5Q9UPZ3 1129 aa18.45■□□□□ 0.54
CTSD-202ENST00000367196 LRRFIP2Q9Y608 721 aaKnown RBP18.45■□□□□ 0.54
CTSD-202ENST00000367196 SEMA3EO15041 775 aa18.44■□□□□ 0.54
CTSD-202ENST00000367196 MAP3K9P80192 1104 aa18.44■□□□□ 0.54
CTSD-202ENST00000367196 FBXO46Q6PJ61 603 aaPredicted RBP18.44■□□□□ 0.54
CTSD-202ENST00000367196 ELP3Q9H9T3 547 aa18.44■□□□□ 0.54
CTSD-202ENST00000367196 IGF2BP3O00425 579 aaKnown RBP eCLIP18.43■□□□□ 0.54
CTSD-202ENST00000367196 DCAF15Q66K64 600 aa18.43■□□□□ 0.54
CTSD-202ENST00000367196 INTS3Q68E01 1043 aaKnown RBP18.43■□□□□ 0.54
CTSD-202ENST00000367196 ZGPATQ8N5A5 531 aaKnown RBP18.43■□□□□ 0.54
CTSD-202ENST00000367196 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.43■□□□□ 0.54
CTSD-202ENST00000367196 COPRSQ9NQ92 184 aa18.43■□□□□ 0.54
CTSD-202ENST00000367196 DENND2AQ9ULE3 1009 aa18.43■□□□□ 0.54
CTSD-202ENST00000367196 TESPA1A2RU30 521 aaPredicted RBP18.42■□□□□ 0.54
CTSD-202ENST00000367196 WDHD1O75717 1129 aaPredicted RBP18.42■□□□□ 0.54
CTSD-202ENST00000367196 GTF2A2P52657 109 aa18.42■□□□□ 0.54
CTSD-202ENST00000367196 VGLL4Q14135 290 aa18.42■□□□□ 0.54
CTSD-202ENST00000367196 APOBEC3HQ6NTF7 200 aaKnown RBP18.42■□□□□ 0.54
CTSD-202ENST00000367196 ERO1AQ96HE7 468 aa18.42■□□□□ 0.54
CTSD-202ENST00000367196 MEIS3Q99687 375 aa18.42■□□□□ 0.54
CTSD-202ENST00000367196 SALL1Q9NSC2 1324 aa18.42■□□□□ 0.54
CTSD-202ENST00000367196 ZBTB22O15209 634 aa18.41■□□□□ 0.54
CTSD-202ENST00000367196 LDHBP07195 334 aaKnown RBP18.41■□□□□ 0.54
CTSD-202ENST00000367196 CACNB3P54284 484 aa18.41■□□□□ 0.54
CTSD-202ENST00000367196 SOX10P56693 466 aa18.41■□□□□ 0.54
CTSD-202ENST00000367196 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.41■□□□□ 0.54
CTSD-202ENST00000367196 GJA5P36382 358 aa18.4■□□□□ 0.54
CTSD-202ENST00000367196 CRHR2Q13324 411 aa18.4■□□□□ 0.54
CTSD-202ENST00000367196 CDAN1Q8IWY9 1227 aa18.4■□□□□ 0.54
CTSD-202ENST00000367196 WRNIP1Q96S55 665 aa18.4■□□□□ 0.54
CTSD-202ENST00000367196 AKAP2Q9Y2D5 859 aa18.4■□□□□ 0.54
CTSD-202ENST00000367196 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
CTSD-202ENST00000367196 MTX1Q13505 466 aa18.39■□□□□ 0.53
CTSD-202ENST00000367196 OTUD5Q96G74 571 aa18.39■□□□□ 0.53
CTSD-202ENST00000367196 ZNF341Q9BYN7 854 aa18.39■□□□□ 0.53
CTSD-202ENST00000367196 R3HDMLQ9H3Y0 253 aa18.39■□□□□ 0.53
CTSD-202ENST00000367196 PA2G4Q9UQ80 394 aaKnown RBP18.39■□□□□ 0.53
CTSD-202ENST00000367196 DAGLAQ9Y4D2 1042 aa18.39■□□□□ 0.53
CTSD-202ENST00000367196 TRIM17Q9Y577 477 aa18.39■□□□□ 0.53
CTSD-202ENST00000367196 CCL15-CCL14A0A0B4J2E2 113 aa18.38■□□□□ 0.53
CTSD-202ENST00000367196 SPDYE5A6NIY4 337 aa18.38■□□□□ 0.53
CTSD-202ENST00000367196 ARHGEF6Q15052 776 aa18.38■□□□□ 0.53
CTSD-202ENST00000367196 CCL15Q16663 113 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms