RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 DSCC1Q9BVC3 393 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 TRIM5Q9C035 493 aa17.2■□□□□ 0.34
PRKN-204ENST00000366896 FOSBP53539 338 aa17.19■□□□□ 0.34
PRKN-204ENST00000366896 NARFQ9UHQ1 456 aa17.19■□□□□ 0.34
PRKN-204ENST00000366896 MORC2Q9Y6X9 1032 aaPredicted RBP17.19■□□□□ 0.34
PRKN-204ENST00000366896 A0A0G2JLW4 131 aa17.19■□□□□ 0.34
PRKN-204ENST00000366896 ADRA2BP18089 450 aa17.19■□□□□ 0.34
PRKN-204ENST00000366896 TRIM28Q13263 835 aaKnown RBP17.19■□□□□ 0.34
PRKN-204ENST00000366896 TRAPPC3LQ5T215 181 aa17.19■□□□□ 0.34
PRKN-204ENST00000366896 ZNF771Q7L3S4 317 aaPredicted RBP17.19■□□□□ 0.34
PRKN-204ENST00000366896 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
PRKN-204ENST00000366896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.18■□□□□ 0.34
PRKN-204ENST00000366896 CCDC191Q8NCU4 936 aa17.18■□□□□ 0.34
PRKN-204ENST00000366896 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
PRKN-204ENST00000366896 H3BQV1 296 aa17.18■□□□□ 0.34
PRKN-204ENST00000366896 H7C1W4 665 aa17.18■□□□□ 0.34
PRKN-204ENST00000366896 GOLIM4O00461 696 aa17.18■□□□□ 0.34
PRKN-204ENST00000366896 CTAGE5O15320 804 aa17.18■□□□□ 0.34
PRKN-204ENST00000366896 FOXO4P98177 505 aa17.18■□□□□ 0.34
PRKN-204ENST00000366896 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
PRKN-204ENST00000366896 DHX32Q7L7V1 743 aaKnown RBP17.18■□□□□ 0.34
PRKN-204ENST00000366896 FBXL16Q8N461 479 aa17.18■□□□□ 0.34
PRKN-204ENST00000366896 RGL2O15211 777 aa17.17■□□□□ 0.34
PRKN-204ENST00000366896 CEBPZQ03701 1054 aaKnown RBP17.17■□□□□ 0.34
PRKN-204ENST00000366896 NAA30Q147X3 362 aaPredicted RBP17.17■□□□□ 0.34
PRKN-204ENST00000366896 ZNF34Q8IZ26 560 aa17.17■□□□□ 0.34
PRKN-204ENST00000366896 CACTINQ8WUQ7 758 aaKnown RBP17.17■□□□□ 0.34
PRKN-204ENST00000366896 FTOQ9C0B1 505 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRKN-204ENST00000366896 SRP68Q9UHB9 627 aaKnown RBP17.17■□□□□ 0.34
PRKN-204ENST00000366896 LAMA4Q16363 1823 aa17.17■□□□□ 0.34
PRKN-204ENST00000366896 GPTP24298 496 aa17.17■□□□□ 0.34
PRKN-204ENST00000366896 CDC25BP30305 580 aa17.17■□□□□ 0.34
PRKN-204ENST00000366896 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
PRKN-204ENST00000366896 ATG9AQ7Z3C6 839 aa17.17■□□□□ 0.34
PRKN-204ENST00000366896 KIF18AQ8NI77 898 aa17.17■□□□□ 0.34
PRKN-204ENST00000366896 RCOR1Q9UKL0 485 aa17.17■□□□□ 0.34
PRKN-204ENST00000366896 CTDNEP1O95476 244 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 SLFN14P0C7P3 912 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 FGD1P98174 961 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 TPD52L1Q16890 204 aaPredicted RBP17.16■□□□□ 0.34
PRKN-204ENST00000366896 NSUN7Q8NE18 718 aaKnown RBP17.16■□□□□ 0.34
PRKN-204ENST00000366896 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 DNAJC25Q9H1X3 360 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 SPEF2Q9C093 1822 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 PPFIA3O75145 1194 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 ZPR1O75312 459 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 RFC4P35249 363 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 TIMM10P62072 90 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 EXOSC10Q01780 885 aaKnown RBP17.16■□□□□ 0.34
PRKN-204ENST00000366896 APOBRQ0VD83 1088 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 NLRP10Q86W26 655 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.16■□□□□ 0.34
PRKN-204ENST00000366896 CLIP2Q9UDT6 1046 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 UBN2Q6ZU65 1347 aa17.16■□□□□ 0.34
PRKN-204ENST00000366896 ADD1P35611 737 aaKnown RBP17.15■□□□□ 0.34
PRKN-204ENST00000366896 ZNF165P49910 485 aa17.15■□□□□ 0.34
PRKN-204ENST00000366896 ZMYM1Q5SVZ6 1142 aa17.15■□□□□ 0.34
PRKN-204ENST00000366896 PAG1Q9NWQ8 432 aa17.15■□□□□ 0.34
PRKN-204ENST00000366896 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
PRKN-204ENST00000366896 IL15P40933 162 aaPredicted RBP17.15■□□□□ 0.34
PRKN-204ENST00000366896 CCDC144BQ3MJ40 725 aa17.15■□□□□ 0.34
PRKN-204ENST00000366896 CEP135Q66GS9 1140 aa17.15■□□□□ 0.34
PRKN-204ENST00000366896 SARM1Q6SZW1 724 aa17.15■□□□□ 0.34
PRKN-204ENST00000366896 CCDC144CPQ8IYA2 1237 aa17.15■□□□□ 0.34
PRKN-204ENST00000366896 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
PRKN-204ENST00000366896 SALL1Q9NSC2 1324 aa17.14■□□□□ 0.33
PRKN-204ENST00000366896 CCT2P78371 535 aaKnown RBP17.14■□□□□ 0.33
PRKN-204ENST00000366896 ZNF274Q96GC6 653 aaPredicted RBP17.14■□□□□ 0.33
PRKN-204ENST00000366896 NCOA5Q9HCD5 579 aaKnown RBP17.14■□□□□ 0.33
PRKN-204ENST00000366896 LRRC24Q50LG9 513 aa17.13■□□□□ 0.33
PRKN-204ENST00000366896 ZNF594Q96JF6 807 aaPredicted RBP17.13■□□□□ 0.33
PRKN-204ENST00000366896 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
PRKN-204ENST00000366896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.13■□□□□ 0.33
PRKN-204ENST00000366896 CIAO1O76071 339 aa17.13■□□□□ 0.33
PRKN-204ENST00000366896 EVCP57679 992 aa17.13■□□□□ 0.33
PRKN-204ENST00000366896 CHST3Q7LGC8 479 aa17.13■□□□□ 0.33
PRKN-204ENST00000366896 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
PRKN-204ENST00000366896 GOLPH3LQ9H4A5 285 aa17.13■□□□□ 0.33
PRKN-204ENST00000366896 MAST3O60307 1309 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 LRRC8AQ8IWT6 810 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 MYH15Q9Y2K3 1946 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 E7EWF7 191 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 NEMFO60524 1076 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 PCCAP05165 728 aaPredicted RBP17.12■□□□□ 0.33
PRKN-204ENST00000366896 PARP10Q53GL7 1025 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 TBC1D9BQ66K14 1250 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 NYAP1Q6ZVC0 841 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 KRT222Q8N1A0 295 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 RGS22Q8NE09 1264 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 UPF1Q92900 1129 aaKnown RBP eCLIP17.12■□□□□ 0.33
PRKN-204ENST00000366896 ZNF396Q96N95 335 aaPredicted RBP17.12■□□□□ 0.33
PRKN-204ENST00000366896 FAM53CQ9NYF3 392 aa17.12■□□□□ 0.33
PRKN-204ENST00000366896 HSPD1P10809 573 aaKnown RBP17.11■□□□□ 0.33
PRKN-204ENST00000366896 TERF2Q15554 542 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 SLC15A2Q16348 729 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 SUSD4Q5VX71 490 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 C11orf57Q6ZUT1 292 aaPredicted RBP17.11■□□□□ 0.33
PRKN-204ENST00000366896 COL23A1Q86Y22 540 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms