RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 TM4SF4P48230 202 aa17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 RBM5P52756 815 aaKnown RBP eCLIP17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 TTLL12Q14166 644 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 RASA3Q14644 834 aa17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 NBPF12Q5TAG4 269 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 ATF7IPQ6VMQ6 1270 aa17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 SIL1Q9H173 461 aa17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 TDRD3Q9H7E2 651 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 ANGEL1Q9UNK9 670 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 PA2G4Q9UQ80 394 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 UNCXA6NJT0 531 aa17.05■□□□□ 0.32
TNFRSF1A-202ENST00000366159 SLC5A1P13866 664 aa17.05■□□□□ 0.32
TNFRSF1A-202ENST00000366159 IL15P40933 162 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-202ENST00000366159 CHAF1AQ13111 956 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-202ENST00000366159 PRKG1Q13976 671 aa17.05■□□□□ 0.32
TNFRSF1A-202ENST00000366159 ABHD8Q96I13 439 aa17.05■□□□□ 0.32
TNFRSF1A-202ENST00000366159 TEPSINQ96N21 525 aa17.05■□□□□ 0.32
TNFRSF1A-202ENST00000366159 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
TNFRSF1A-202ENST00000366159 CEP126Q9P2H0 1117 aa17.05■□□□□ 0.32
TNFRSF1A-202ENST00000366159 USP2O75604 605 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-202ENST00000366159 HNRNPUQ00839 825 aaKnown RBP eCLIP17.04■□□□□ 0.32
TNFRSF1A-202ENST00000366159 SUPT20HL1Q3ZLR7 823 aa17.04■□□□□ 0.32
TNFRSF1A-202ENST00000366159 ZDHHC15Q96MV8 337 aa17.04■□□□□ 0.32
TNFRSF1A-202ENST00000366159 LAMB1P07942 1786 aa17.04■□□□□ 0.32
TNFRSF1A-202ENST00000366159 FRAT2O75474 233 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1A-202ENST00000366159 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-202ENST00000366159 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
TNFRSF1A-202ENST00000366159 SPRYD7Q5W111 196 aa17.03■□□□□ 0.32
TNFRSF1A-202ENST00000366159 APOBEC3HQ6NTF7 200 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-202ENST00000366159 PPP1R12BO60237 982 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-202ENST00000366159 TNFAIP1Q13829 316 aa17.02■□□□□ 0.32
TNFRSF1A-202ENST00000366159 CDAN1Q8IWY9 1227 aa17.02■□□□□ 0.32
TNFRSF1A-202ENST00000366159 WDR66Q8TBY9 1149 aa17.02■□□□□ 0.32
TNFRSF1A-202ENST00000366159 FRAT1Q92837 279 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-202ENST00000366159 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
TNFRSF1A-202ENST00000366159 MYH13Q9UKX3 1938 aa17.02■□□□□ 0.31
TNFRSF1A-202ENST00000366159 HHIPL2Q6UWX4 724 aa17.01■□□□□ 0.31
TNFRSF1A-202ENST00000366159 CLMNQ96JQ2 1002 aa17.01■□□□□ 0.31
TNFRSF1A-202ENST00000366159 CFHR5Q9BXR6 569 aa17.01■□□□□ 0.31
TNFRSF1A-202ENST00000366159 SALL1Q9NSC2 1324 aa17.01■□□□□ 0.31
TNFRSF1A-202ENST00000366159 SRGAP3O43295 1099 aa17■□□□□ 0.31
TNFRSF1A-202ENST00000366159 ZKSCAN2Q63HK3 967 aa17■□□□□ 0.31
TNFRSF1A-202ENST00000366159 CLUAP1Q96AJ1 413 aa17■□□□□ 0.31
TNFRSF1A-202ENST00000366159 MCOLN1Q9GZU1 580 aa17■□□□□ 0.31
TNFRSF1A-202ENST00000366159 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-202ENST00000366159 MAST3O60307 1309 aa17■□□□□ 0.31
TNFRSF1A-202ENST00000366159 TCP10L2B9ZVM9 353 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 SEMA3EO15041 775 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 GNAI2P04899 355 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 ZBTB48P10074 688 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 ADORA1P30542 326 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 PHKA1P46020 1223 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 TIMM10P62072 90 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 FKBP1CQ5VVH2 108 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 TMEM57Q8N5G2 664 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 CNKSR2Q8WXI2 1034 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 SLC10A4Q96EP9 437 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 TMEM39BQ9GZU3 492 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
TNFRSF1A-202ENST00000366159 GJA5P36382 358 aa16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 IREB2P48200 963 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 TNNI2P48788 182 aa16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 SREBF2Q12772 1141 aa16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 MKRN3Q13064 507 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 NOM1Q5C9Z4 860 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 CCDC102BQ68D86 513 aa16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 FAM83AQ86UY5 434 aa16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 ANKRD13AQ8IZ07 590 aa16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 WNK4Q96J92 1243 aa16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 OTOFQ9HC10 1997 aa16.98■□□□□ 0.31
TNFRSF1A-202ENST00000366159 PNMA6EA0A0J9YXQ4 647 aa16.97■□□□□ 0.31
TNFRSF1A-202ENST00000366159 TBC1D8O95759 1140 aa16.97■□□□□ 0.31
TNFRSF1A-202ENST00000366159 PRDX5P30044 214 aa16.97■□□□□ 0.31
TNFRSF1A-202ENST00000366159 CACNB3P54284 484 aa16.97■□□□□ 0.31
TNFRSF1A-202ENST00000366159 INHBEP58166 350 aa16.97■□□□□ 0.31
TNFRSF1A-202ENST00000366159 TFCP2Q12800 502 aa16.97■□□□□ 0.31
TNFRSF1A-202ENST00000366159 DGKZQ13574 1117 aa16.97■□□□□ 0.31
TNFRSF1A-202ENST00000366159 GNL3LQ9NVN8 582 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-202ENST00000366159 DENND2AQ9ULE3 1009 aa16.97■□□□□ 0.31
TNFRSF1A-202ENST00000366159 PDS5AQ29RF7 1337 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-202ENST00000366159 MANSC4A6NHS7 340 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF1A-202ENST00000366159 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF1A-202ENST00000366159 A0A1B0GUL7 405 aa16.96■□□□□ 0.3
TNFRSF1A-202ENST00000366159 TESPA1A2RU30 521 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF1A-202ENST00000366159 RASGRF1Q13972 1273 aa16.96■□□□□ 0.3
TNFRSF1A-202ENST00000366159 POLA2Q14181 598 aa16.96■□□□□ 0.3
TNFRSF1A-202ENST00000366159 DIXDC1Q155Q3 683 aa16.96■□□□□ 0.3
TNFRSF1A-202ENST00000366159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.96■□□□□ 0.3
TNFRSF1A-202ENST00000366159 XAGE2Q96GT9 111 aa16.96■□□□□ 0.3
TNFRSF1A-202ENST00000366159 R3HDMLQ9H3Y0 253 aa16.96■□□□□ 0.3
TNFRSF1A-202ENST00000366159 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.3
TNFRSF1A-202ENST00000366159 DAGLAQ9Y4D2 1042 aa16.96■□□□□ 0.3
TNFRSF1A-202ENST00000366159 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-202ENST00000366159 ZBTB7BO15156 539 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-202ENST00000366159 LDHBP07195 334 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-202ENST00000366159 RLBP1P12271 317 aa16.95■□□□□ 0.3
TNFRSF1A-202ENST00000366159 CDC42EP5Q6NZY7 148 aa16.95■□□□□ 0.3
TNFRSF1A-202ENST00000366159 IFNL1Q8IU54 200 aa16.95■□□□□ 0.3
TNFRSF1A-202ENST00000366159 ZNF296Q8WUU4 475 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms