RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 PDGFAP04085 211 aa8.04□□□□□ -1.12
RNU4-4P-201ENST00000364588 DNM1Q05193 864 aaKnown RBP8.04□□□□□ -1.12
RNU4-4P-201ENST00000364588 ZNF211Q13398 564 aaPredicted RBP8.04□□□□□ -1.12
RNU4-4P-201ENST00000364588 PERM1Q5SV97 790 aa8.04□□□□□ -1.12
RNU4-4P-201ENST00000364588 GPAT2Q6NUI2 795 aa8.04□□□□□ -1.12
RNU4-4P-201ENST00000364588 C8orf86Q6ZUL3 223 aa8.04□□□□□ -1.12
RNU4-4P-201ENST00000364588 TTC9Q92623 222 aa8.04□□□□□ -1.12
RNU4-4P-201ENST00000364588 LRRC7Q96NW7 1537 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 SYNMO15061 1565 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 SCAF11Q99590 1463 aaKnown RBP8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 KRBA1A5PL33 1030 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 ZBTB42B2RXF5 422 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 LTKP29376 864 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 AFF1P51825 1210 aaKnown RBP8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 RAC1P63000 192 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 EHHADHQ08426 723 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 AAMPQ13685 434 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 COL9A3Q14050 684 aaPredicted RBP8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 TXNDC2Q86VQ3 553 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 PIK3C2BO00750 1634 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 DAPK1P53355 1430 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 ERBINQ96RT1 1412 aa8.03□□□□□ -1.12
RNU4-4P-201ENST00000364588 LOC102724428A0A0B4J2F2 783 aa8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 H3BRB1 525 aa8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 SIK1P57059 783 aa8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 HYAL2Q12891 473 aa8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 TRIM28Q13263 835 aaKnown RBP8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 GLYCTKQ8IVS8 523 aa8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 SPACA7Q96KW9 195 aa8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 NACC1Q96RE7 527 aa8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 SMG9Q9H0W8 520 aaKnown RBP8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 TUT1Q9H6E5 874 aaKnown RBP8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 ELP3Q9H9T3 547 aa8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 ARHGAP31Q2M1Z3 1444 aa8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 FGD6Q6ZV73 1430 aa8.02□□□□□ -1.13
RNU4-4P-201ENST00000364588 XIRP1Q702N8 1843 aaKnown RBP8.01□□□□□ -1.13
RNU4-4P-201ENST00000364588 ARHGAP23Q9P227 1491 aa8.01□□□□□ -1.13
RNU4-4P-201ENST00000364588 MSTNO14793 375 aa8.01□□□□□ -1.13
RNU4-4P-201ENST00000364588 ICMTO60725 284 aa8.01□□□□□ -1.13
RNU4-4P-201ENST00000364588 APBA3O96018 575 aa8.01□□□□□ -1.13
RNU4-4P-201ENST00000364588 TRAPPC3LQ5T215 181 aa8.01□□□□□ -1.13
RNU4-4P-201ENST00000364588 DTWD1Q8N5C7 304 aa8.01□□□□□ -1.13
RNU4-4P-201ENST00000364588 CCER1Q8TC90 406 aaPredicted RBP8.01□□□□□ -1.13
RNU4-4P-201ENST00000364588 PLD4Q96BZ4 506 aa8.01□□□□□ -1.13
RNU4-4P-201ENST00000364588 SLIT1O75093 1534 aa8.01□□□□□ -1.13
RNU4-4P-201ENST00000364588 KANK1Q14678 1352 aa8□□□□□ -1.13
RNU4-4P-201ENST00000364588 SERPINB4P48594 390 aa8□□□□□ -1.13
RNU4-4P-201ENST00000364588 C8orf34Q49A92 452 aa8□□□□□ -1.13
RNU4-4P-201ENST00000364588 XKR5Q6UX68 686 aa8□□□□□ -1.13
RNU4-4P-201ENST00000364588 HFE2Q6ZVN8 426 aa8□□□□□ -1.13
RNU4-4P-201ENST00000364588 WFDC8Q8IUA0 241 aa8□□□□□ -1.13
RNU4-4P-201ENST00000364588 CACTIN-AS1Q8N1I8 211 aa8□□□□□ -1.13
RNU4-4P-201ENST00000364588 ANO2Q9NQ90 1003 aa8□□□□□ -1.13
RNU4-4P-201ENST00000364588 POLIQ9UNA4 740 aa8□□□□□ -1.13
RNU4-4P-201ENST00000364588 EID1Q9Y6B2 187 aa8□□□□□ -1.13
RNU4-4P-201ENST00000364588 ANKRD30AQ9BXX3 1397 aa7.99□□□□□ -1.13
RNU4-4P-201ENST00000364588 KIF4AO95239 1232 aa7.99□□□□□ -1.13
RNU4-4P-201ENST00000364588 ELNP15502 786 aa7.99□□□□□ -1.13
RNU4-4P-201ENST00000364588 MSL1Q68DK7 614 aa7.99□□□□□ -1.13
RNU4-4P-201ENST00000364588 DCAF11Q8TEB1 546 aa7.99□□□□□ -1.13
RNU4-4P-201ENST00000364588 SNX29Q8TEQ0 813 aa7.99□□□□□ -1.13
RNU4-4P-201ENST00000364588 TMEM63CQ9P1W3 806 aa7.99□□□□□ -1.13
RNU4-4P-201ENST00000364588 EFCAB6Q5THR3 1501 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 TMEM2Q9UHN6 1383 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 A0A0A0MRY4 1105 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 J3QW42 95 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 FZD6O60353 706 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 BRD1O95696 1058 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 IDI1Q13907 227 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 FAM50AQ14320 339 aaKnown RBP7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 GRIK5Q16478 980 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 NCAPG2Q86XI2 1143 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 SPOCK3Q9BQ16 436 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 LMTK2Q8IWU2 1503 aa7.98□□□□□ -1.13
RNU4-4P-201ENST00000364588 NDUFB5O43674 189 aa7.97□□□□□ -1.13
RNU4-4P-201ENST00000364588 SMNDC1O75940 238 aaKnown RBP eCLIP7.97□□□□□ -1.13
RNU4-4P-201ENST00000364588 FMR1NBQ8N0W7 255 aaPredicted RBP7.97□□□□□ -1.13
RNU4-4P-201ENST00000364588 GJD3Q8N144 294 aa7.97□□□□□ -1.13
RNU4-4P-201ENST00000364588 PMEPA1Q969W9 287 aa7.97□□□□□ -1.13
RNU4-4P-201ENST00000364588 SLC26A8Q96RN1 970 aa7.97□□□□□ -1.13
RNU4-4P-201ENST00000364588 SRA1Q9HD15 236 aaKnown RBP7.97□□□□□ -1.13
RNU4-4P-201ENST00000364588 KDM5AP29375 1690 aaKnown RBP7.97□□□□□ -1.13
RNU4-4P-201ENST00000364588 MYO5BQ9ULV0 1848 aa7.96□□□□□ -1.13
RNU4-4P-201ENST00000364588 C1QTNF9BB2RNN3 333 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 FAM229AH3BQW9 127 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 PROCP04070 461 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 ITGB2P05107 769 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 CES1P23141 567 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 CHRNA4P43681 627 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 CD163Q86VB7 1156 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 MUC3BQ9H195 1237 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 GGNBP2Q9H3C7 697 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 BRPF3Q9ULD4 1205 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 ADGRB3O60242 1522 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 TMEM94Q12767 1356 aa7.96□□□□□ -1.14
RNU4-4P-201ENST00000364588 NOS1P29475 1434 aa7.95□□□□□ -1.14
RNU4-4P-201ENST00000364588 ADGRL2O95490 1459 aa7.95□□□□□ -1.14
RNU4-4P-201ENST00000364588 FAM177BA6PVY3 158 aa7.95□□□□□ -1.14
RNU4-4P-201ENST00000364588 PHACTR2O75167 634 aa7.95□□□□□ -1.14
RNU4-4P-201ENST00000364588 GDF6Q6KF10 455 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms