RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 NLRP1Q9C000 1473 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 hCG_1642624A0A1W2PR95 340 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 GPAA1O43292 621 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 CCDC144BQ3MJ40 725 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 KRT40Q6A162 431 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 IQCEQ6IPM2 695 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 CLIC6Q96NY7 704 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 VPS16Q9H269 839 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 SLC4A4Q9Y6R1 1079 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 AATKQ6ZMQ8 1374 aa15.86■□□□□ 0.13
COL6A1-201ENST00000361866 CCDC194A0A1B0GVG4 234 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 TRIM75PA6NK02 468 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 EYA2O00167 538 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 IGSF22Q8N9C0 903 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 IPO4Q8TEX9 1081 aaKnown RBP15.85■□□□□ 0.13
COL6A1-201ENST00000361866 GJB4Q9NTQ9 266 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 KCNJ14Q9UNX9 436 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 SASH1O94885 1247 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 SLC5A1P13866 664 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 OAS2P29728 719 aaKnown RBP15.85■□□□□ 0.13
COL6A1-201ENST00000361866 PPARDQ03181 441 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 TTC14Q96N46 770 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 RNF41Q9H4P4 317 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-201ENST00000361866 BABAM1Q9NWV8 329 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 SHTN1A0MZ66 631 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 TMEM87AQ8NBN3 555 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 PGBD1Q96JS3 809 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 FANCLQ9NW38 375 aa15.85■□□□□ 0.13
COL6A1-201ENST00000361866 TTF1Q15361 905 aaPredicted RBP15.84■□□□□ 0.13
COL6A1-201ENST00000361866 CMTR1Q8N1G2 835 aaKnown RBP15.84■□□□□ 0.13
COL6A1-201ENST00000361866 ORAI2Q96SN7 254 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 GPHNQ9NQX3 736 aaPredicted RBP15.84■□□□□ 0.13
COL6A1-201ENST00000361866 IMPACTQ9P2X3 320 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 MAP3K4Q9Y6R4 1608 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 YEATS2Q9ULM3 1422 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 SEC31AO94979 1220 aaKnown RBP15.84■□□□□ 0.13
COL6A1-201ENST00000361866 HSPD1P10809 573 aaKnown RBP15.84■□□□□ 0.13
COL6A1-201ENST00000361866 PAFAH1B1P43034 410 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 DIS3L2Q8IYB7 885 aaKnown RBP15.84■□□□□ 0.13
COL6A1-201ENST00000361866 GPATCH11Q8N954 259 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.84■□□□□ 0.13
COL6A1-201ENST00000361866 ARHGEF10O15013 1369 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 USP27XA6NNY8 438 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 POTEB2H3BUK9 544 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 KCNF1Q9H3M0 494 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 VAT1LQ9HCJ6 419 aa15.84■□□□□ 0.13
COL6A1-201ENST00000361866 ANGEL1Q9UNK9 670 aaKnown RBP15.84■□□□□ 0.13
COL6A1-201ENST00000361866 AKR1B15C9JRZ8 316 aaPredicted RBP15.83■□□□□ 0.13
COL6A1-201ENST00000361866 AKR1B10O60218 316 aa15.83■□□□□ 0.13
COL6A1-201ENST00000361866 TUBB4AP04350 444 aa15.83■□□□□ 0.13
COL6A1-201ENST00000361866 RNF187Q5TA31 235 aaPredicted RBP15.83■□□□□ 0.13
COL6A1-201ENST00000361866 FBXO38Q6PIJ6 1188 aa15.83■□□□□ 0.13
COL6A1-201ENST00000361866 NCOA3Q9Y6Q9 1424 aa15.83■□□□□ 0.13
COL6A1-201ENST00000361866 MYO1BO43795 1136 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 PFKFB2O60825 505 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 CHMP4BP1P59074 171 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 CADPS2Q86UW7 1296 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 NSUN7Q8NE18 718 aaKnown RBP15.83■□□□□ 0.12
COL6A1-201ENST00000361866 MKNK2Q9HBH9 465 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 BCCIPQ9P287 314 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL6A1-201ENST00000361866 ARHGAP6O43182 974 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 ZAP70P43403 619 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 HLTFQ14527 1009 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL6A1-201ENST00000361866 TAX1BP1Q86VP1 789 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 VWA3AA6NCI4 1184 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 PDIA3P30101 505 aaKnown RBP15.83■□□□□ 0.12
COL6A1-201ENST00000361866 CT47A1Q5JQC4 288 aaPredicted RBP15.83■□□□□ 0.12
COL6A1-201ENST00000361866 MAGEB6Q8N7X4 407 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 CEP112Q8N8E3 955 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 XAGE2Q96GT9 111 aa15.83■□□□□ 0.12
COL6A1-201ENST00000361866 LUC7LQ9NQ29 371 aaKnown RBP15.82■□□□□ 0.12
COL6A1-201ENST00000361866 ERCC6L2Q5T890 1561 aa15.82■□□□□ 0.12
COL6A1-201ENST00000361866 ZNF174Q15697 407 aa15.82■□□□□ 0.12
COL6A1-201ENST00000361866 TSPY2A6NKD2 308 aa15.82■□□□□ 0.12
COL6A1-201ENST00000361866 USO1O60763 962 aaKnown RBP15.82■□□□□ 0.12
COL6A1-201ENST00000361866 ATP1A3P13637 1013 aa15.82■□□□□ 0.12
COL6A1-201ENST00000361866 CYP7A1P22680 504 aa15.82■□□□□ 0.12
COL6A1-201ENST00000361866 SMC1AQ14683 1233 aaKnown RBP15.82■□□□□ 0.12
COL6A1-201ENST00000361866 SEPT11Q9NVA2 429 aaKnown RBP15.82■□□□□ 0.12
COL6A1-201ENST00000361866 PNPLA6Q8IY17 1366 aa15.82■□□□□ 0.12
COL6A1-201ENST00000361866 UBXN1Q04323 297 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 POLA2Q14181 598 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 CCDC96Q2M329 555 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 HINFPQ9BQA5 517 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 LRRC7Q96NW7 1537 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 LRRC24Q50LG9 513 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 ZFYVE27Q5T4F4 411 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 PPP1R13BQ96KQ4 1090 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 IGSF1Q8N6C5 1336 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.81■□□□□ 0.12
COL6A1-201ENST00000361866 SPTLC3Q9NUV7 552 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 CROCC2H7BZ55 1655 aa15.81■□□□□ 0.12
COL6A1-201ENST00000361866 PRDM1O75626 825 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 MBD4O95243 580 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 MCM7P33993 719 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 TAF4BQ92750 862 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 CTAGE1Q96RT6 745 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 KIF1BO60333 1816 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 APPBP2Q92624 585 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms