RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 GSTO1P78417 241 aa16.81■□□□□ 0.28
NSMCE1-201ENST00000361439 HHIPL2Q6UWX4 724 aa16.81■□□□□ 0.28
NSMCE1-201ENST00000361439 TAF1DQ9H5J8 278 aaPredicted RBP16.81■□□□□ 0.28
NSMCE1-201ENST00000361439 RRAGCQ9HB90 399 aa16.81■□□□□ 0.28
NSMCE1-201ENST00000361439 SNRKQ9NRH2 765 aa16.81■□□□□ 0.28
NSMCE1-201ENST00000361439 PAG1Q9NWQ8 432 aa16.81■□□□□ 0.28
NSMCE1-201ENST00000361439 LRP2BPQ9P2M1 347 aa16.81■□□□□ 0.28
NSMCE1-201ENST00000361439 ABCF2Q9UG63 623 aa16.81■□□□□ 0.28
NSMCE1-201ENST00000361439 PRDX5P30044 214 aa16.8■□□□□ 0.28
NSMCE1-201ENST00000361439 MAP3K12Q12852 859 aa16.8■□□□□ 0.28
NSMCE1-201ENST00000361439 ZNF784Q8NCA9 323 aaPredicted RBP16.8■□□□□ 0.28
NSMCE1-201ENST00000361439 ZC3H15Q8WU90 426 aaKnown RBP16.8■□□□□ 0.28
NSMCE1-201ENST00000361439 TEKT1Q969V4 418 aa16.8■□□□□ 0.28
NSMCE1-201ENST00000361439 FAM163AQ96GL9 167 aaPredicted RBP16.8■□□□□ 0.28
NSMCE1-201ENST00000361439 DNAJC2Q99543 621 aaKnown RBP16.8■□□□□ 0.28
NSMCE1-201ENST00000361439 MYOZ2Q9NPC6 264 aa16.8■□□□□ 0.28
NSMCE1-201ENST00000361439 LDHCP07864 332 aa16.79■□□□□ 0.28
NSMCE1-201ENST00000361439 LRRFIP1Q32MZ4 808 aaKnown RBP16.79■□□□□ 0.28
NSMCE1-201ENST00000361439 DZIP1Q86YF9 867 aaKnown RBP16.79■□□□□ 0.28
NSMCE1-201ENST00000361439 GOLIM4O00461 696 aa16.78■□□□□ 0.28
NSMCE1-201ENST00000361439 PDE4AP27815 886 aa16.78■□□□□ 0.28
NSMCE1-201ENST00000361439 TBC1D9Q6ZT07 1266 aa16.78■□□□□ 0.28
NSMCE1-201ENST00000361439 NSUN4Q96CB9 384 aaKnown RBP16.78■□□□□ 0.28
NSMCE1-201ENST00000361439 ZBED3Q96IU2 234 aaPredicted RBP16.78■□□□□ 0.28
NSMCE1-201ENST00000361439 ZDHHC15Q96MV8 337 aa16.78■□□□□ 0.28
NSMCE1-201ENST00000361439 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.78■□□□□ 0.28
NSMCE1-201ENST00000361439 NMRK2Q9NPI5 230 aa16.78■□□□□ 0.28
NSMCE1-201ENST00000361439 RAI14Q9P0K7 980 aa16.78■□□□□ 0.28
NSMCE1-201ENST00000361439 F8W031 263 aaPredicted RBP16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 MAP4K4O95819 1239 aaPredicted RBP16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 CRKP46108 304 aa16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 MECOMQ03112 1051 aa16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 DLGAP5Q15398 846 aa16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 GRIK5Q16478 980 aa16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 KIF4BQ2VIQ3 1234 aa16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 TSHZ3Q63HK5 1081 aa16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 ZSCAN25Q6NSZ9 544 aa16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 CERS3Q8IU89 383 aa16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 ZNF526Q8TF50 670 aaPredicted RBP16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 PIH1D3Q9NQM4 214 aaKnown RBP16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 PGAP2Q9UHJ9 254 aa16.77■□□□□ 0.28
NSMCE1-201ENST00000361439 GAKO14976 1311 aa16.76■□□□□ 0.27
NSMCE1-201ENST00000361439 SPDYE2BA6NHP3 402 aa16.76■□□□□ 0.27
NSMCE1-201ENST00000361439 MYO1BO43795 1136 aa16.76■□□□□ 0.27
NSMCE1-201ENST00000361439 IDH1O75874 414 aaKnown RBP16.76■□□□□ 0.27
NSMCE1-201ENST00000361439 SPDYE6P0CI01 402 aa16.76■□□□□ 0.27
NSMCE1-201ENST00000361439 CFAP100Q494V2 611 aa16.76■□□□□ 0.27
NSMCE1-201ENST00000361439 SAMD7Q7Z3H4 446 aa16.76■□□□□ 0.27
NSMCE1-201ENST00000361439 KBTBD3Q8NAB2 608 aa16.76■□□□□ 0.27
NSMCE1-201ENST00000361439 EVI5LQ96CN4 794 aa16.76■□□□□ 0.27
NSMCE1-201ENST00000361439 ANTXR1Q9H6X2 564 aa16.76■□□□□ 0.27
NSMCE1-201ENST00000361439 WNT10BO00744 389 aa16.75■□□□□ 0.27
NSMCE1-201ENST00000361439 ZFYP08048 801 aaPredicted RBP16.75■□□□□ 0.27
NSMCE1-201ENST00000361439 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.27
NSMCE1-201ENST00000361439 NAA16Q6N069 864 aaPredicted RBP16.75■□□□□ 0.27
NSMCE1-201ENST00000361439 LDHDQ86WU2 507 aa16.75■□□□□ 0.27
NSMCE1-201ENST00000361439 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
NSMCE1-201ENST00000361439 NDUFB9Q9Y6M9 179 aa16.75■□□□□ 0.27
NSMCE1-201ENST00000361439 MROH7-TTC4A0A0A0MT08 1334 aa16.74■□□□□ 0.27
NSMCE1-201ENST00000361439 PITPNM2Q9BZ72 1349 aa16.74■□□□□ 0.27
NSMCE1-201ENST00000361439 SHTN1A0MZ66 631 aa16.74■□□□□ 0.27
NSMCE1-201ENST00000361439 KIF3CO14782 793 aa16.74■□□□□ 0.27
NSMCE1-201ENST00000361439 TBC1D10BQ4KMP7 808 aaPredicted RBP16.74■□□□□ 0.27
NSMCE1-201ENST00000361439 SLC9C2Q5TAH2 1124 aa16.74■□□□□ 0.27
NSMCE1-201ENST00000361439 APOBEC3HQ6NTF7 200 aaKnown RBP16.74■□□□□ 0.27
NSMCE1-201ENST00000361439 TRPM4Q8TD43 1214 aa16.74■□□□□ 0.27
NSMCE1-201ENST00000361439 RFX7Q2KHR2 1363 aa16.74■□□□□ 0.27
NSMCE1-201ENST00000361439 GPR75-ASB3A0A0A6YYF3 556 aa16.73■□□□□ 0.27
NSMCE1-201ENST00000361439 BAG3O95817 575 aa16.73■□□□□ 0.27
NSMCE1-201ENST00000361439 PLCG2P16885 1265 aa16.73■□□□□ 0.27
NSMCE1-201ENST00000361439 HIRAP54198 1017 aaPredicted RBP16.73■□□□□ 0.27
NSMCE1-201ENST00000361439 UBE3CQ15386 1083 aa16.73■□□□□ 0.27
NSMCE1-201ENST00000361439 DIXDC1Q155Q3 683 aa16.73■□□□□ 0.27
NSMCE1-201ENST00000361439 RBM26Q5T8P6 1007 aaKnown RBP16.73■□□□□ 0.27
NSMCE1-201ENST00000361439 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
NSMCE1-201ENST00000361439 ZNF384Q8TF68 577 aa16.73■□□□□ 0.27
NSMCE1-201ENST00000361439 DAGLAQ9Y4D2 1042 aa16.73■□□□□ 0.27
NSMCE1-201ENST00000361439 TOMM70O94826 608 aa16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 EGFRP00533 1210 aa16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 PDE6AP16499 860 aa16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 PPP4CP60510 307 aa16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 EAPPQ56P03 285 aaPredicted RBP16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 FKBP1CQ5VVH2 108 aa16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 MAGEB6Q8N7X4 407 aa16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 RBM46Q8TBY0 533 aaKnown RBP16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 EDC3Q96F86 508 aaKnown RBP16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 PRMT6Q96LA8 375 aaPredicted RBP16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 NOL10Q9BSC4 688 aaKnown RBP16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 DOCK2Q92608 1830 aa16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 MAST2Q6P0Q8 1798 aa16.72■□□□□ 0.27
NSMCE1-201ENST00000361439 CYP7A1P22680 504 aa16.71■□□□□ 0.27
NSMCE1-201ENST00000361439 ADD2P35612 726 aa16.71■□□□□ 0.27
NSMCE1-201ENST00000361439 NBPF9Q3BBW0 867 aa16.71■□□□□ 0.27
NSMCE1-201ENST00000361439 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
NSMCE1-201ENST00000361439 DCPSQ96C86 337 aaKnown RBP16.71■□□□□ 0.27
NSMCE1-201ENST00000361439 FSD1Q9BTV5 496 aa16.71■□□□□ 0.27
NSMCE1-201ENST00000361439 ADAMTSL1Q8N6G6 1762 aa16.7■□□□□ 0.26
NSMCE1-201ENST00000361439 TCRBV5S4A2TA0A5A2 114 aa16.7■□□□□ 0.26
NSMCE1-201ENST00000361439 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
NSMCE1-201ENST00000361439 HIP1O00291 1037 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms