RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CDAN1Q8IWY9 1227 aa26.66■■□□□ 1.86
CD47-202ENST00000361309 TEPSINQ96N21 525 aa26.66■■□□□ 1.86
CD47-202ENST00000361309 RIPOR2Q9Y4F9 1068 aa26.66■■□□□ 1.86
CD47-202ENST00000361309 TCP10L2B9ZVM9 353 aa26.65■■□□□ 1.86
CD47-202ENST00000361309 NBPF7P0C2Y1 421 aaPredicted RBP26.65■■□□□ 1.86
CD47-202ENST00000361309 CRKP46108 304 aa26.65■■□□□ 1.86
CD47-202ENST00000361309 GRIK5Q16478 980 aa26.64■■□□□ 1.86
CD47-202ENST00000361309 TMEM39BQ9GZU3 492 aa26.64■■□□□ 1.86
CD47-202ENST00000361309 IQSEC3Q9UPP2 1182 aaPredicted RBP26.64■■□□□ 1.86
CD47-202ENST00000361309 PTPN22Q9Y2R2 807 aa26.64■■□□□ 1.86
CD47-202ENST00000361309 MROH5Q6ZUA9 1318 aa26.64■■□□□ 1.85
CD47-202ENST00000361309 POTEFA5A3E0 1075 aa26.63■■□□□ 1.85
CD47-202ENST00000361309 INTS3Q68E01 1043 aaKnown RBP26.63■■□□□ 1.85
CD47-202ENST00000361309 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.63■■□□□ 1.85
CD47-202ENST00000361309 VPS37DQ86XT2 251 aa26.63■■□□□ 1.85
CD47-202ENST00000361309 CNKSR2Q8WXI2 1034 aa26.63■■□□□ 1.85
CD47-202ENST00000361309 MS4A4AQ96JQ5 239 aa26.63■■□□□ 1.85
CD47-202ENST00000361309 TNNI2P48788 182 aa26.62■■□□□ 1.85
CD47-202ENST00000361309 SP3Q02447 781 aa26.62■■□□□ 1.85
CD47-202ENST00000361309 FBXO33Q7Z6M2 555 aa26.62■■□□□ 1.85
CD47-202ENST00000361309 BICC1Q9H694 974 aaKnown RBP26.62■■□□□ 1.85
CD47-202ENST00000361309 EFCC1Q9HA90 598 aa26.62■■□□□ 1.85
CD47-202ENST00000361309 UTYO14607 1347 aa26.62■■□□□ 1.85
CD47-202ENST00000361309 MYH13Q9UKX3 1938 aa26.61■■□□□ 1.85
CD47-202ENST00000361309 CAP1Q01518 475 aa26.61■■□□□ 1.85
CD47-202ENST00000361309 CHAF1AQ13111 956 aaPredicted RBP26.61■■□□□ 1.85
CD47-202ENST00000361309 MAP3K9P80192 1104 aa26.6■■□□□ 1.85
CD47-202ENST00000361309 VGLL4Q14135 290 aa26.6■■□□□ 1.85
CD47-202ENST00000361309 LRRC24Q50LG9 513 aa26.6■■□□□ 1.85
CD47-202ENST00000361309 FAM9BQ8IZU0 186 aa26.6■■□□□ 1.85
CD47-202ENST00000361309 RABL6Q3YEC7 729 aaPredicted RBP26.59■■□□□ 1.85
CD47-202ENST00000361309 METTL24Q5JXM2 366 aa26.59■■□□□ 1.85
CD47-202ENST00000361309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.59■■□□□ 1.85
CD47-202ENST00000361309 BRI3BPQ8WY22 251 aa26.59■■□□□ 1.85
CD47-202ENST00000361309 BRCA2P51587 3418 aa26.59■■□□□ 1.85
CD47-202ENST00000361309 FRAT2O75474 233 aaPredicted RBP26.58■■□□□ 1.85
CD47-202ENST00000361309 CAVIN4Q5BKX8 364 aa26.58■■□□□ 1.85
CD47-202ENST00000361309 ANKRD44Q8N8A2 993 aa26.58■■□□□ 1.85
CD47-202ENST00000361309 TBC1D22AQ8WUA7 517 aa26.58■■□□□ 1.85
CD47-202ENST00000361309 CSADQ9Y600 493 aa26.58■■□□□ 1.85
CD47-202ENST00000361309 CCL15-CCL14A0A0B4J2E2 113 aa26.57■■□□□ 1.84
CD47-202ENST00000361309 GTF2A2P52657 109 aa26.57■■□□□ 1.84
CD47-202ENST00000361309 CACNB3P54284 484 aa26.57■■□□□ 1.84
CD47-202ENST00000361309 HDLBPQ00341 1268 aaKnown RBP26.57■■□□□ 1.84
CD47-202ENST00000361309 CCL15Q16663 113 aa26.57■■□□□ 1.84
CD47-202ENST00000361309 VGLL2Q8N8G2 317 aa26.57■■□□□ 1.84
CD47-202ENST00000361309 ARMC5Q96C12 935 aa26.57■■□□□ 1.84
CD47-202ENST00000361309 OTUD5Q96G74 571 aa26.57■■□□□ 1.84
CD47-202ENST00000361309 TAF1CQ15572 869 aaPredicted RBP26.56■■□□□ 1.84
CD47-202ENST00000361309 TEKT1Q969V4 418 aa26.56■■□□□ 1.84
CD47-202ENST00000361309 AK9Q5TCS8 1911 aa26.55■■□□□ 1.84
CD47-202ENST00000361309 PDE8BO95263 885 aa26.55■■□□□ 1.84
CD47-202ENST00000361309 MRPL50Q8N5N7 158 aaKnown RBP26.55■■□□□ 1.84
CD47-202ENST00000361309 KLHDC4Q8TBB5 520 aa26.55■■□□□ 1.84
CD47-202ENST00000361309 ZFYVE28Q9HCC9 887 aa26.55■■□□□ 1.84
CD47-202ENST00000361309 BCAMP50895 628 aa26.54■■□□□ 1.84
CD47-202ENST00000361309 FAM43AQ8N2R8 423 aa26.54■■□□□ 1.84
CD47-202ENST00000361309 ZSWIM8A7E2V4 1837 aa26.53■■□□□ 1.84
CD47-202ENST00000361309 ZDHHC15Q96MV8 337 aa26.53■■□□□ 1.84
CD47-202ENST00000361309 EN2P19622 333 aaPredicted RBP26.52■■□□□ 1.84
CD47-202ENST00000361309 GCC1Q96CN9 775 aa26.52■■□□□ 1.84
CD47-202ENST00000361309 TMOD2Q9NZR1 351 aa26.52■■□□□ 1.84
CD47-202ENST00000361309 ZNF521Q96K83 1311 aa26.51■■□□□ 1.83
CD47-202ENST00000361309 SPDYE5A6NIY4 337 aa26.51■■□□□ 1.83
CD47-202ENST00000361309 ARHGEF6Q15052 776 aa26.51■■□□□ 1.83
CD47-202ENST00000361309 APOBEC3HQ6NTF7 200 aaKnown RBP26.51■■□□□ 1.83
CD47-202ENST00000361309 WRNIP1Q96S55 665 aa26.51■■□□□ 1.83
CD47-202ENST00000361309 MRIQ9BWK5 157 aa26.51■■□□□ 1.83
CD47-202ENST00000361309 SNCAIPQ9Y6H5 919 aa26.51■■□□□ 1.83
CD47-202ENST00000361309 FAM83AQ86UY5 434 aa26.5■■□□□ 1.83
CD47-202ENST00000361309 ERO1BQ86YB8 467 aa26.5■■□□□ 1.83
CD47-202ENST00000361309 ZKSCAN4Q969J2 545 aaPredicted RBP26.5■■□□□ 1.83
CD47-202ENST00000361309 PTCH2Q9Y6C5 1203 aa26.5■■□□□ 1.83
CD47-202ENST00000361309 MAST3O60307 1309 aa26.49■■□□□ 1.83
CD47-202ENST00000361309 PTPRCP08575 1304 aa26.49■■□□□ 1.83
CD47-202ENST00000361309 PUM3Q15397 648 aaKnown RBP26.49■■□□□ 1.83
CD47-202ENST00000361309 FKBP1CQ5VVH2 108 aa26.49■■□□□ 1.83
CD47-202ENST00000361309 ZNF333Q96JL9 665 aa26.49■■□□□ 1.83
CD47-202ENST00000361309 USP44Q9H0E7 712 aa26.49■■□□□ 1.83
CD47-202ENST00000361309 SUGT1Q9Y2Z0 365 aa26.49■■□□□ 1.83
CD47-202ENST00000361309 KIF16BQ96L93 1317 aa26.48■■□□□ 1.83
CD47-202ENST00000361309 IFIT1P09914 478 aaKnown RBP26.48■■□□□ 1.83
CD47-202ENST00000361309 CETPP11597 493 aa26.48■■□□□ 1.83
CD47-202ENST00000361309 FGFR2P21802 821 aa26.48■■□□□ 1.83
CD47-202ENST00000361309 TMEM106CQ9BVX2 250 aa26.48■■□□□ 1.83
CD47-202ENST00000361309 ZNF316A6NFI3 1004 aaPredicted RBP26.47■■□□□ 1.83
CD47-202ENST00000361309 SLC9C1Q4G0N8 1177 aa26.47■■□□□ 1.83
CD47-202ENST00000361309 HOOK2Q96ED9 719 aa26.47■■□□□ 1.83
CD47-202ENST00000361309 BTBD19C9JJ37 291 aa26.46■■□□□ 1.83
CD47-202ENST00000361309 IRF6O14896 467 aa26.46■■□□□ 1.83
CD47-202ENST00000361309 WDHD1O75717 1129 aaPredicted RBP26.46■■□□□ 1.83
CD47-202ENST00000361309 SNAPC2Q13487 334 aa26.46■■□□□ 1.83
CD47-202ENST00000361309 HHIPL2Q6UWX4 724 aa26.46■■□□□ 1.83
CD47-202ENST00000361309 NBPF11Q86T75 865 aa26.46■■□□□ 1.83
CD47-202ENST00000361309 TLR2O60603 784 aa26.45■■□□□ 1.82
CD47-202ENST00000361309 DCAF15Q66K64 600 aa26.45■■□□□ 1.82
CD47-202ENST00000361309 SSH1Q8WYL5 1049 aa26.45■■□□□ 1.82
CD47-202ENST00000361309 ARHGAP39Q9C0H5 1083 aa26.45■■□□□ 1.82
CD47-202ENST00000361309 ZCCHC17Q9NP64 241 aaKnown RBP26.45■■□□□ 1.82
CD47-202ENST00000361309 RPAP1Q9BWH6 1393 aaPredicted RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms