RNA–Protein interactions for RNA: ENST00000361033.1

TMEM239-201, Transcript of transmembrane protein 239, humanhuman

TSL 2 BASIC

Gene TMEM239, Length 3,892 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM239-201ENST00000361033 UVSSAQ2YD98 709 aa14.09□□□□□ -0.15
TMEM239-201ENST00000361033 NLRP10Q86W26 655 aa14.09□□□□□ -0.15
TMEM239-201ENST00000361033 ZHX3Q9H4I2 956 aa14.09□□□□□ -0.15
TMEM239-201ENST00000361033 MCM9Q9NXL9 1143 aa14.09□□□□□ -0.15
TMEM239-201ENST00000361033 ESR2Q92731 530 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 AIFM3Q96NN9 605 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 CBX8Q9HC52 389 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 LOC102724428A0A0B4J2F2 783 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 SIK1P57059 783 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 AATFQ9NY61 560 aaKnown RBP eCLIP14.08□□□□□ -0.16
TMEM239-201ENST00000361033 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.08□□□□□ -0.16
TMEM239-201ENST00000361033 V9GYY5 206 aaPredicted RBP14.08□□□□□ -0.16
TMEM239-201ENST00000361033 KIF20BQ96Q89 1820 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 CTAGE5O15320 804 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 PRKAB2O43741 272 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 PDE8BO95263 885 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 TXLNAP40222 546 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 ZMYM1Q5SVZ6 1142 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 DSCC1Q9BVC3 393 aa14.08□□□□□ -0.16
TMEM239-201ENST00000361033 PDIA3P30101 505 aaKnown RBP14.07□□□□□ -0.16
TMEM239-201ENST00000361033 CRKLP46109 303 aaKnown RBP14.07□□□□□ -0.16
TMEM239-201ENST00000361033 TTC14Q96N46 770 aa14.07□□□□□ -0.16
TMEM239-201ENST00000361033 TOB2Q14106 344 aaPredicted RBP14.07□□□□□ -0.16
TMEM239-201ENST00000361033 KCNG4Q8TDN1 519 aa14.07□□□□□ -0.16
TMEM239-201ENST00000361033 ATG3Q9NT62 314 aa14.07□□□□□ -0.16
TMEM239-201ENST00000361033 KRT23Q9C075 422 aa14.07□□□□□ -0.16
TMEM239-201ENST00000361033 CABP5Q9NP86 173 aa14.07□□□□□ -0.16
TMEM239-201ENST00000361033 TOM1O60784 492 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 STX17P56962 302 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 PTPN14Q15678 1187 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 TTLL11Q8NHH1 800 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 PLIN2Q99541 437 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 RTCBQ9Y3I0 505 aaKnown RBP14.06□□□□□ -0.16
TMEM239-201ENST00000361033 IFT172Q9UG01 1749 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 PICALMQ13492 652 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 SOGA3Q5TF21 947 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 TPTE2Q6XPS3 522 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 PXDNQ92626 1479 aa14.06□□□□□ -0.16
TMEM239-201ENST00000361033 ITSN1Q15811 1721 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 SMTNL1A8MU46 457 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 SKILP12757 684 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 STAMQ92783 540 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 DHX58Q96C10 678 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 LRMPQ12912 555 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 KRT40Q6A162 431 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 NOC3LQ8WTT2 800 aaKnown RBP14.05□□□□□ -0.16
TMEM239-201ENST00000361033 CCDC47Q96A33 483 aaKnown RBP14.05□□□□□ -0.16
TMEM239-201ENST00000361033 CDK5RAP3Q96JB5 506 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 SAP30BPQ9UHR5 308 aaKnown RBP14.05□□□□□ -0.16
TMEM239-201ENST00000361033 MCAMP43121 646 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 FOXO4P98177 505 aa14.05□□□□□ -0.16
TMEM239-201ENST00000361033 CCNL1Q9UK58 526 aaPredicted RBP14.05□□□□□ -0.16
TMEM239-201ENST00000361033 USP32Q8NFA0 1604 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 EPB41L2O43491 1005 aaKnown RBP14.04□□□□□ -0.16
TMEM239-201ENST00000361033 IPO7O95373 1038 aaKnown RBP14.04□□□□□ -0.16
TMEM239-201ENST00000361033 TOP1P11387 765 aaKnown RBP14.04□□□□□ -0.16
TMEM239-201ENST00000361033 PTPN21Q16825 1174 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 FAM47AQ5JRC9 791 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 NSUN7Q8NE18 718 aaKnown RBP14.04□□□□□ -0.16
TMEM239-201ENST00000361033 CRNKL1Q9BZJ0 848 aaKnown RBP14.04□□□□□ -0.16
TMEM239-201ENST00000361033 IFNKQ9P0W0 207 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 V9GY48 417 aaPredicted RBP14.04□□□□□ -0.16
TMEM239-201ENST00000361033 KCNQ2O43526 872 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 FILIP1LQ4L180 1135 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
TMEM239-201ENST00000361033 KAT14Q9H8E8 782 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 CNNM2Q9H8M5 875 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 CYP2E1P05181 493 aaPredicted RBP14.04□□□□□ -0.16
TMEM239-201ENST00000361033 FAM160A1Q05DH4 1040 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 SUSD4Q5VX71 490 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 TRMT1LQ7Z2T5 733 aaKnown RBP14.04□□□□□ -0.16
TMEM239-201ENST00000361033 PPFIBP1Q86W92 1011 aa14.04□□□□□ -0.16
TMEM239-201ENST00000361033 DIS3L2Q8IYB7 885 aaKnown RBP14.04□□□□□ -0.16
TMEM239-201ENST00000361033 CCDC194A0A1B0GVG4 234 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 PFKFB2O60825 505 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 ANO1Q5XXA6 986 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 CLSTN2Q9H4D0 955 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 PIH1D3Q9NQM4 214 aaKnown RBP14.03□□□□□ -0.16
TMEM239-201ENST00000361033 CYP2D7A0A087X1C5 515 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 NAP1L1P55209 391 aaKnown RBP14.03□□□□□ -0.16
TMEM239-201ENST00000361033 CHRNDQ07001 517 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 PDE4BQ07343 736 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 STOX1Q6ZVD7 989 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 ATG9AQ7Z3C6 839 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 IFNL3Q8IZI9 196 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 UIMC1Q96RL1 719 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 CLIC4Q9Y696 253 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 OFD1O75665 1012 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 CLIC6Q96NY7 704 aa14.03□□□□□ -0.16
TMEM239-201ENST00000361033 UBASH3AP57075 661 aa14.02□□□□□ -0.16
TMEM239-201ENST00000361033 COL9A3Q14050 684 aaPredicted RBP14.02□□□□□ -0.16
TMEM239-201ENST00000361033 ZNF174Q15697 407 aa14.02□□□□□ -0.16
TMEM239-201ENST00000361033 CEP131Q9UPN4 1083 aa14.02□□□□□ -0.16
TMEM239-201ENST00000361033 EIF6P56537 245 aaKnown RBP14.02□□□□□ -0.17
TMEM239-201ENST00000361033 CBX1P83916 185 aa14.02□□□□□ -0.17
TMEM239-201ENST00000361033 SMARCE1Q969G3 411 aa14.02□□□□□ -0.17
TMEM239-201ENST00000361033 PPP1R9BQ96SB3 815 aa14.02□□□□□ -0.17
TMEM239-201ENST00000361033 VPS54Q9P1Q0 977 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms