RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 CLUL1Q15846 466 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 MPRIPQ6WCQ1 1025 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 LDHAL6AQ6ZMR3 332 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 IQUBQ8NA54 791 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 SLC52A1Q9NWF4 448 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.05■□□□□ -0
CCDC144A-203ENST00000360495 ERCC3P19447 782 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 ATP8B2P98198 1209 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 ESR2Q92731 530 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 TNNQ9UQP3 1299 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 STK38LQ9Y2H1 464 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 CROCCP2Q86T23 111 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 PLEKHM2Q8IWE5 1019 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 NUF2Q9BZD4 464 aa15.05■□□□□ -0
CCDC144A-203ENST00000360495 AMOTQ4VCS5 1084 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 TRIM68Q6AZZ1 485 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 SDCCAG8Q86SQ7 713 aaPredicted RBP15.04■□□□□ -0
CCDC144A-203ENST00000360495 VPS52Q8N1B4 723 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 LMBRD1Q9NUN5 540 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 IFT140Q96RY7 1462 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 MUM1Q2TAK8 710 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 CERS3Q8IU89 383 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 PPANQ9NQ55 473 aaKnown RBP15.04■□□□□ -0
CCDC144A-203ENST00000360495 ZRANB1Q9UGI0 708 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 TBC1D8BQ0IIM8 1120 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 RAPGEF1Q13905 1077 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 INF2Q27J81 1249 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 CCDC170Q8IYT3 715 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 DDX21Q9NR30 783 aaKnown RBP eCLIP15.04■□□□□ -0
CCDC144A-203ENST00000360495 ANKIB1Q9P2G1 1089 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 FAM69CQ0P6D2 419 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 SLC4A8Q2Y0W8 1093 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 CHST3Q7LGC8 479 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 GDAP1L1Q96MZ0 367 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 NOC4LQ9BVI4 516 aaKnown RBP15.04■□□□□ -0
CCDC144A-203ENST00000360495 TRIM31Q9BZY9 425 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 DCTPP1Q9H773 170 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 STX8Q9UNK0 236 aa15.04■□□□□ -0
CCDC144A-203ENST00000360495 CHMLP26374 656 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 SLC8A1P32418 973 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 KRT2P35908 639 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 MAP7Q14244 749 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 SH2D4BQ5SQS7 431 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 FAM169AQ9Y6X4 670 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 CETN3O15182 167 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 RLBP1P12271 317 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 LONRF3Q496Y0 759 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 PROSER2Q86WR7 435 aaPredicted RBP15.03■□□□□ -0
CCDC144A-203ENST00000360495 MRPL50Q8N5N7 158 aaKnown RBP15.03■□□□□ -0
CCDC144A-203ENST00000360495 SUDS3Q9H7L9 328 aaPredicted RBP15.03■□□□□ -0
CCDC144A-203ENST00000360495 LEO1Q8WVC0 666 aaPredicted RBP15.03■□□□□ -0
CCDC144A-203ENST00000360495 NOX5Q96PH1 765 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 ZNF652Q9Y2D9 606 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 ATP5J2-PTCD1G3V325 749 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 GMNNO75496 209 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 TMTC1Q8IUR5 882 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 MRRFQ96E11 262 aaKnown RBP15.03■□□□□ -0
CCDC144A-203ENST00000360495 TCHPQ9BT92 498 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 ZNF215Q9UL58 517 aaPredicted RBP15.03■□□□□ -0
CCDC144A-203ENST00000360495 GADD45BO75293 160 aaPredicted RBP15.03■□□□□ -0
CCDC144A-203ENST00000360495 PSMD6Q15008 389 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 DIXDC1Q155Q3 683 aa15.03■□□□□ -0
CCDC144A-203ENST00000360495 SH3BGRP55822 239 aaPredicted RBP15.02■□□□□ -0
CCDC144A-203ENST00000360495 KRT79Q5XKE5 535 aa15.02■□□□□ -0
CCDC144A-203ENST00000360495 SPATS2LQ9NUQ6 558 aaKnown RBP15.02■□□□□ -0
CCDC144A-203ENST00000360495 DHX32Q7L7V1 743 aaKnown RBP15.02■□□□□ -0
CCDC144A-203ENST00000360495 SPATS2Q86XZ4 545 aaKnown RBP15.02■□□□□ -0
CCDC144A-203ENST00000360495 SLF2Q8IX21 1173 aa15.02■□□□□ -0
CCDC144A-203ENST00000360495 ZBTB3Q9H5J0 574 aa15.02■□□□□ -0
CCDC144A-203ENST00000360495 TPX2Q9ULW0 747 aaKnown RBP15.02■□□□□ -0
CCDC144A-203ENST00000360495 HIP1RO75146 1068 aa15.02□□□□□ -0.01
CCDC144A-203ENST00000360495 MTMR3Q13615 1198 aa15.02□□□□□ -0.01
CCDC144A-203ENST00000360495 RBBP5Q15291 538 aaKnown RBP15.02□□□□□ -0.01
CCDC144A-203ENST00000360495 KLHL7Q8IXQ5 586 aa15.02□□□□□ -0.01
CCDC144A-203ENST00000360495 UQCRFS1P1P0C7P4 283 aa15.02□□□□□ -0.01
CCDC144A-203ENST00000360495 PRDM11Q9NQV5 511 aa15.02□□□□□ -0.01
CCDC144A-203ENST00000360495 KCNH5Q8NCM2 988 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 TMEM63CQ9P1W3 806 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 TTC41PQ6P2S7 1318 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 FRMD3A2A2Y4 597 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 CPA1P15085 419 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 NAPAP54920 295 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 KRT71Q3SY84 523 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 HHATQ5VTY9 493 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 BCAS4Q8TDM0 211 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 DDX27Q96GQ7 796 aaKnown RBP15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 GNAQP50148 359 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 NSD2O96028 1365 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 CALML3P27482 149 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 ERCC5P28715 1186 aaPredicted RBP15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 PLIN2Q99541 437 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 SLC4A4Q9Y6R1 1079 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 SBNO2Q9Y2G9 1366 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 CAMSAP2Q08AD1 1489 aa15.01□□□□□ -0.01
CCDC144A-203ENST00000360495 MTX1Q13505 466 aa15□□□□□ -0.01
CCDC144A-203ENST00000360495 JARID2Q92833 1246 aaPredicted RBP15□□□□□ -0.01
CCDC144A-203ENST00000360495 EPSTI1Q96J88 318 aa15□□□□□ -0.01
CCDC144A-203ENST00000360495 CRNKL1Q9BZJ0 848 aaKnown RBP15□□□□□ -0.01
CCDC144A-203ENST00000360495 PLCB1Q9NQ66 1216 aa15□□□□□ -0.01
CCDC144A-203ENST00000360495 SYNRGQ9UMZ2 1314 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms