RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 ZNF532Q9HCE3 1301 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 CCDC69A6NI79 296 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 YEATS4O95619 227 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 PDE6AP16499 860 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 PLCD3Q8N3E9 789 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 SPC24Q8NBT2 197 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 PGBD1Q96JS3 809 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 USP28Q96RU2 1077 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 KRT23Q9C075 422 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 CBX8Q9HC52 389 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 TOMM22Q9NS69 142 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 RIC1Q4ADV7 1423 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 FAM177BA6PVY3 158 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 SAFBQ15424 915 aaKnown RBP eCLIP10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 RBM43Q6ZSC3 357 aaKnown RBP10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 SPATA5Q8NB90 893 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 COL14A1Q05707 1796 aaKnown RBP10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 RRP9O43818 475 aaKnown RBP10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 NRDCO43847 1150 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 CTDNEP1O95476 244 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 ZNF34Q8IZ26 560 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 RNF41Q9H4P4 317 aaPredicted RBP10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 NHSL1Q5SYE7 1610 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 KAT6BQ8WYB5 2073 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 TDO2P48775 406 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 NOLC1Q14978 699 aaKnown RBP eCLIP10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 PI16Q6UXB8 463 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 LUZP1Q86V48 1076 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 FBXO18Q8NFZ0 1043 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 RTEL1Q9NZ71 1219 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 DISP2A7MBM2 1401 aa10.83□□□□□ -0.68
GTF3C2-202ENST00000359541 SALL1Q9NSC2 1324 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 ZBTB43O43298 467 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 PHKA1P46020 1223 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 MAPK8IP2Q13387 824 aaPredicted RBP10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 TDRD7Q8NHU6 1098 aaKnown RBP10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 MAP7D2Q96T17 732 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 DNAJC25Q9H1X3 360 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 TTC12Q9H892 705 aaPredicted RBP10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 LRP6O75581 1613 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 ZMYM6O95789 1325 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 A0A1W2PQ27 194 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 A0A1W2PQ64 194 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 A0A1W2PQD8 194 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 GOLGA8AA7E2F4 631 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 GTF2E1P29083 439 aaPredicted RBP10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 TMEM67Q5HYA8 995 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 ADALQ6DHV7 355 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 TRIM22Q8IYM9 498 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 SYNE4Q8N205 404 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 PRIMPOLQ96LW4 560 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 LRP2BPQ9P2M1 347 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 UQCRHLA0A096LP55 91 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 UQCRHP07919 91 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 IARSP41252 1262 aaKnown RBP10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 MTERF4Q7Z6M4 381 aaKnown RBP10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 NIP7Q9Y221 180 aaKnown RBP eCLIP10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 SLC12A7Q9Y666 1083 aa10.82□□□□□ -0.68
GTF3C2-202ENST00000359541 CCDC196A0A1B0GTZ2 297 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 PATL2C9JE40 543 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 SPTLC2O15270 562 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 DHX8Q14562 1220 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 ALX1Q15699 326 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 MFSD6Q6ZSS7 791 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 MPNDQ8N594 471 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 MAGEB6Q8N7X4 407 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 ALG1Q9BT22 464 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 PIH1D3Q9NQM4 214 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 POLR3EQ9NVU0 708 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 ATRNO75882 1429 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 IFIT3O14879 490 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 EIF5P55010 431 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 VPS37DQ86XT2 251 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 ADAMTS2O95450 1211 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 POLR3DP05423 398 aaPredicted RBP10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 MYSM1Q5VVJ2 828 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 TMTC2Q8N394 836 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 VGLL2Q8N8G2 317 aa10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 HELBQ8NG08 1087 aaPredicted RBP10.81□□□□□ -0.68
GTF3C2-202ENST00000359541 LOC102724428A0A0B4J2F2 783 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 NEMFO60524 1076 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 MBD4O95243 580 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 CRKLP46109 303 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 SIK1P57059 783 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 MICU3Q86XE3 530 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 CCDC34Q96HJ3 373 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 ZNF830Q96NB3 372 aaPredicted RBP10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 HOOK1Q9UJC3 728 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 SHANK3Q9BYB0 1731 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 TOGARAM1Q9Y4F4 1720 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 DYNC1I1O14576 645 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 PPFIA3O75145 1194 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 B4E1Z4 1266 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 SH2B2O14492 632 aaPredicted RBP10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 SSRP1Q08945 709 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 CLIP2Q9UDT6 1046 aa10.8□□□□□ -0.68
GTF3C2-202ENST00000359541 A0A0G2JLW4 131 aa10.79□□□□□ -0.68
GTF3C2-202ENST00000359541 ZNF75DP51815 510 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms