RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 C15orf52Q6ZUT6 534 aaKnown RBP16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 MPNDQ8N594 471 aa16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 APPBP2Q92624 585 aa16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 KIF2CQ99661 725 aa16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 PIH1D3Q9NQM4 214 aaKnown RBP16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 IRS2Q9Y4H2 1338 aa16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 IDH1O75874 414 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-203ENST00000359265 KLRK1P26718 216 aa16.61■□□□□ 0.25
PDLIM5-203ENST00000359265 ADD2P35612 726 aa16.61■□□□□ 0.25
PDLIM5-203ENST00000359265 MAP3K12Q12852 859 aa16.61■□□□□ 0.25
PDLIM5-203ENST00000359265 WASHC4Q2M389 1173 aa16.61■□□□□ 0.25
PDLIM5-203ENST00000359265 SOGA3Q5TF21 947 aa16.61■□□□□ 0.25
PDLIM5-203ENST00000359265 ZNF804AQ7Z570 1209 aa16.61■□□□□ 0.25
PDLIM5-203ENST00000359265 LAMA4Q16363 1823 aa16.61■□□□□ 0.25
PDLIM5-203ENST00000359265 WTIPA6NIX2 430 aaPredicted RBP16.6■□□□□ 0.25
PDLIM5-203ENST00000359265 PTH1RQ03431 593 aa16.6■□□□□ 0.25
PDLIM5-203ENST00000359265 UBE3CQ15386 1083 aa16.6■□□□□ 0.25
PDLIM5-203ENST00000359265 DPP8Q6V1X1 898 aaPredicted RBP16.6■□□□□ 0.25
PDLIM5-203ENST00000359265 ZNF589Q86UQ0 364 aaPredicted RBP16.6■□□□□ 0.25
PDLIM5-203ENST00000359265 IQSEC3Q9UPP2 1182 aaPredicted RBP16.6■□□□□ 0.25
PDLIM5-203ENST00000359265 PDE4DIPQ5VU43 2346 aa16.6■□□□□ 0.25
PDLIM5-203ENST00000359265 MAST3O60307 1309 aa16.6■□□□□ 0.25
PDLIM5-203ENST00000359265 C6orf229H3BNL8 230 aa16.59■□□□□ 0.25
PDLIM5-203ENST00000359265 FRAT2O75474 233 aaPredicted RBP16.59■□□□□ 0.25
PDLIM5-203ENST00000359265 TBC1D16Q8TBP0 767 aa16.59■□□□□ 0.25
PDLIM5-203ENST00000359265 MAP4K1Q92918 833 aa16.59■□□□□ 0.25
PDLIM5-203ENST00000359265 IL17RAQ96F46 866 aa16.59■□□□□ 0.25
PDLIM5-203ENST00000359265 SEC62Q99442 399 aaKnown RBP16.59■□□□□ 0.25
PDLIM5-203ENST00000359265 EYA3Q99504 573 aa16.59■□□□□ 0.25
PDLIM5-203ENST00000359265 RBM8AQ9Y5S9 174 aaKnown RBP16.59■□□□□ 0.25
PDLIM5-203ENST00000359265 NFKBIEO00221 500 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 CHGBP05060 677 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 PDE6AP16499 860 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 CCDC93Q567U6 631 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 SLC9C2Q5TAH2 1124 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 RNF20Q5VTR2 975 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 CCDC129Q6ZRS4 1044 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 SLC51AQ86UW1 340 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 HSCBQ8IWL3 235 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 SUPT20HQ8NEM7 779 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 SNX21Q969T3 373 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 LRP2BPQ9P2M1 347 aa16.58■□□□□ 0.24
PDLIM5-203ENST00000359265 TMEM88BA6NKF7 163 aa16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 M0R2C6 588 aa16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 ITGBL1O95965 494 aaPredicted RBP16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 TXNRD3Q86VQ6 643 aa16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 RTKN2Q8IZC4 609 aa16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 IL27Q8NEV9 243 aa16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 OSBP2Q969R2 916 aa16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 DSCC1Q9BVC3 393 aa16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 PALD1Q9ULE6 856 aa16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
PDLIM5-203ENST00000359265 ZNF532Q9HCE3 1301 aa16.56■□□□□ 0.24
PDLIM5-203ENST00000359265 C21orf2O43822 256 aa16.56■□□□□ 0.24
PDLIM5-203ENST00000359265 SLFNL1Q499Z3 407 aa16.56■□□□□ 0.24
PDLIM5-203ENST00000359265 DPY19L2Q6NUT2 758 aa16.56■□□□□ 0.24
PDLIM5-203ENST00000359265 TBC1D2Q9BYX2 928 aa16.56■□□□□ 0.24
PDLIM5-203ENST00000359265 POLLQ9UGP5 575 aa16.56■□□□□ 0.24
PDLIM5-203ENST00000359265 MYH2Q9UKX2 1941 aa16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 ST18O60284 1047 aa16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 IGSF3O75054 1194 aa16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 ZKSCAN1P17029 563 aaPredicted RBP16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 NECTIN1Q15223 517 aa16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 ZGPATQ8N5A5 531 aaKnown RBP16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 MAGEB6Q8N7X4 407 aa16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 TDRD7Q8NHU6 1098 aaKnown RBP16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 KCNB2Q92953 911 aa16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 GPR101Q96P66 508 aaPredicted RBP16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 RTFDC1Q9BY42 306 aaPredicted RBP16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 ZC3H12CQ9C0D7 883 aaKnown RBP16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 RAI14Q9P0K7 980 aa16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 ABCF2Q9UG63 623 aa16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 SNX14Q9Y5W7 946 aa16.55■□□□□ 0.24
PDLIM5-203ENST00000359265 FER1L6Q2WGJ9 1857 aa16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 SNED1Q8TER0 1413 aa16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 WDR33Q9C0J8 1336 aaKnown RBP16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 SALL1Q9NSC2 1324 aa16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 TCRBV5S4A2TA0A5A2 114 aa16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 GPAA1O43292 621 aa16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 DDNO94850 711 aaPredicted RBP16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 CHAF1AQ13111 956 aaPredicted RBP16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 DEFB115Q30KQ5 88 aa16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 CREB3L3Q68CJ9 461 aa16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 OLFM4Q6UX06 510 aa16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 ERICH6Q7L0X2 663 aa16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 WDR66Q8TBY9 1149 aa16.54■□□□□ 0.24
PDLIM5-203ENST00000359265 RASSF10A6NK89 507 aa16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 SLC27A2O14975 620 aa16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 HSPD1P10809 573 aaKnown RBP16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 MAP2K1Q02750 393 aaPredicted RBP16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 SPTY2D1Q68D10 685 aaPredicted RBP16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 TMED8Q6PL24 325 aaPredicted RBP16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 PSMD1Q99460 953 aa16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 PUS7LQ9H0K6 701 aaKnown RBP16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 CD209Q9NNX6 404 aa16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 TSKSQ9UJT2 592 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms