RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 PDHBP11177 359 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 NAP1L1P55209 391 aaKnown RBP12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 NCAPHQ15003 741 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 NOA1Q8NC60 698 aaKnown RBP12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 BPIFA3Q9BQP9 254 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 RCOR1Q9UKL0 485 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 STX10O60499 249 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 SLC3A2P08195 630 aaKnown RBP12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 CCDC175P0C221 793 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 SMTNP53814 917 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 SAAL1Q96ER3 474 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 ADGRL3Q9HAR2 1447 aa12.99□□□□□ -0.33
SEPSECS-201ENST00000358971 CTAGE9A4FU28 777 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 BLOC1S2Q6QNY1 142 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 MICALCLQ6ZW33 695 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 KIAA1328Q86T90 577 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 CCDC148Q8NFR7 591 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 USP28Q96RU2 1077 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 HSP90AA4PQ58FG1 418 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 MRPS27Q92552 414 aaKnown RBP12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 PSMA5P28066 241 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 ICA1Q05084 483 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 ANKRD1Q15327 319 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 RSRC1Q96IZ7 334 aaKnown RBP12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 MYO6Q9UM54 1294 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 RPS6KL1Q9Y6S9 549 aa12.98□□□□□ -0.33
SEPSECS-201ENST00000358971 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 NLRP12P59046 1061 aa12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 COL9A3Q14050 684 aaPredicted RBP12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 SLC40A1Q9NP59 571 aa12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 RPS6KA3P51812 740 aa12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 KCNB1Q14721 858 aa12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 MTF1Q14872 753 aa12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 SF3A1Q15459 793 aaKnown RBP12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 TMEM132EQ6IEE7 984 aa12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 COG1Q8WTW3 980 aa12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 CCDC114Q96M63 670 aa12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 AOX1Q06278 1338 aa12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 MAST1Q9Y2H9 1570 aa12.97□□□□□ -0.33
SEPSECS-201ENST00000358971 ZEB2O60315 1214 aa12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 MAGI1Q96QZ7 1491 aaPredicted RBP12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 GOLGA6BA6NDN3 693 aa12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 PFKFB2O60825 505 aa12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 CCT4P50991 539 aaKnown RBP12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 CREB3L3Q68CJ9 461 aa12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 CCDC13Q8IYE1 715 aa12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 STK31Q9BXU1 1019 aa12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 RBM8AQ9Y5S9 174 aaKnown RBP12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 GRIN2DO15399 1336 aa12.96□□□□□ -0.33
SEPSECS-201ENST00000358971 NDUFA8P51970 172 aa12.96□□□□□ -0.34
SEPSECS-201ENST00000358971 SAFB2Q14151 953 aaKnown RBP eCLIP12.96□□□□□ -0.34
SEPSECS-201ENST00000358971 SPATS2Q86XZ4 545 aaKnown RBP12.96□□□□□ -0.34
SEPSECS-201ENST00000358971 FMR1NBQ8N0W7 255 aaPredicted RBP12.96□□□□□ -0.34
SEPSECS-201ENST00000358971 PIK3R5Q8WYR1 880 aa12.96□□□□□ -0.34
SEPSECS-201ENST00000358971 ZNF396Q96N95 335 aaPredicted RBP12.96□□□□□ -0.34
SEPSECS-201ENST00000358971 VCPKMTQ9H867 229 aa12.96□□□□□ -0.34
SEPSECS-201ENST00000358971 LRRC7Q96NW7 1537 aa12.96□□□□□ -0.34
SEPSECS-201ENST00000358971 ZMYND10O75800 440 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 RASSF9O75901 435 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 PECAM1P16284 738 aaPredicted RBP12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 FBLN1P23142 703 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 ATP8B2P98198 1209 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 TUBB2AQ13885 445 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 WDR93Q6P2C0 686 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 RPUSD2Q8IZ73 545 aaKnown RBP12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 LMBR1Q8WVP7 490 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 PDCLQ13371 301 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 ATP6V0A4Q9HBG4 840 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 SETD1BQ9UPS6 1966 aaKnown RBP12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 IKBKBO14920 756 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 FYB1O15117 783 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 CCDC50Q8IVM0 306 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 SLC35F6Q8N357 371 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 PI4K2BQ8TCG2 481 aa12.95□□□□□ -0.34
SEPSECS-201ENST00000358971 CDK12Q9NYV4 1490 aaPredicted RBP12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 NRXN1Q9ULB1 1477 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 A0A0U1RQJ8 604 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 GOLGA6L7A0A1B0GV03 622 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 ADD1P35611 737 aaKnown RBP12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 MYL5Q02045 173 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 WHAMMP3Q1A5X7 153 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 NCAPH2Q6IBW4 605 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 RCSD1Q6JBY9 416 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 ATRIPQ8WXE1 791 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 USP32Q8NFA0 1604 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 MCM3P25205 808 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 SLC8A3P57103 927 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 IFT88Q13099 833 aa12.94□□□□□ -0.34
SEPSECS-201ENST00000358971 NECTIN1Q15223 517 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms