RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 ANO1Q5XXA6 986 aa16.69■□□□□ 0.26
SLC6A20-202ENST00000358525 TPTE2Q6XPS3 522 aa16.69■□□□□ 0.26
SLC6A20-202ENST00000358525 ELP1O95163 1332 aa16.69■□□□□ 0.26
SLC6A20-202ENST00000358525 SH3TC1Q8TE82 1336 aa16.69■□□□□ 0.26
SLC6A20-202ENST00000358525 ZNF804AQ7Z570 1209 aa16.69■□□□□ 0.26
SLC6A20-202ENST00000358525 MCM3P25205 808 aa16.68■□□□□ 0.26
SLC6A20-202ENST00000358525 TMEM87BQ96K49 555 aa16.68■□□□□ 0.26
SLC6A20-202ENST00000358525 SEC62Q99442 399 aaKnown RBP16.68■□□□□ 0.26
SLC6A20-202ENST00000358525 CBX8Q9HC52 389 aa16.68■□□□□ 0.26
SLC6A20-202ENST00000358525 ALS2CR12Q96Q35 445 aa16.68■□□□□ 0.26
SLC6A20-202ENST00000358525 E7EWF7 191 aa16.68■□□□□ 0.26
SLC6A20-202ENST00000358525 CDK12Q9NYV4 1490 aaPredicted RBP16.68■□□□□ 0.26
SLC6A20-202ENST00000358525 SPAG1Q07617 926 aa16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 TRMT1LQ7Z2T5 733 aaKnown RBP16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 MYL10Q9BUA6 226 aa16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 JADE2Q9NQC1 790 aa16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 NLRP1Q9C000 1473 aa16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 ASIC1P78348 528 aa16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 TAX1BP1Q86VP1 789 aa16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 C17orf53Q8N3J3 647 aaPredicted RBP16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 POTEB2H3BUK9 544 aa16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 SSR1P43307 286 aaKnown RBP16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 TPCN1Q9ULQ1 816 aa16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 CALML3P27482 149 aa16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 BMS1Q14692 1282 aaKnown RBP16.67■□□□□ 0.26
SLC6A20-202ENST00000358525 PSMA7O14818 248 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 LIG1P18858 919 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 GPT2Q8TD30 523 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 OSBPL3Q9H4L5 887 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 CTDSPL2Q05D32 466 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 GTF3C6Q969F1 213 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 NSFL1CQ9UNZ2 370 aaKnown RBP16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 SPHKAPQ2M3C7 1700 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 ZNF174Q15697 407 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 WWC2Q6AWC2 1192 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 TTLL7Q6ZT98 887 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 DSCC1Q9BVC3 393 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 SLU7O95391 586 aaKnown RBP16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 MYL5Q02045 173 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 PHKBQ93100 1093 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 LRRC27Q9C0I9 530 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 LSG1Q9H089 658 aaKnown RBP16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 ZSWIM6Q9HCJ5 1215 aa16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 RTCBQ9Y3I0 505 aaKnown RBP16.66■□□□□ 0.26
SLC6A20-202ENST00000358525 AKR1B10O60218 316 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 RGS12O14924 1447 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 LDHBP07195 334 aaKnown RBP16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 PLIN2Q99541 437 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 ANTXR1Q9H6X2 564 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 ZNF532Q9HCE3 1301 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 SYT10Q6XYQ8 523 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 MADDQ8WXG6 1647 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 PRAMEF22A3QJZ6 481 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 VWA3AA6NCI4 1184 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 MYO1BO43795 1136 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 GAS2L3Q86XJ1 694 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 ANKRD2Q9GZV1 360 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 C6orf50Q9HD87 102 aa16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 RBM28Q9NW13 759 aaKnown RBP16.65■□□□□ 0.26
SLC6A20-202ENST00000358525 PARP10Q53GL7 1025 aa16.64■□□□□ 0.26
SLC6A20-202ENST00000358525 SPECC1Q5M775 1068 aa16.64■□□□□ 0.26
SLC6A20-202ENST00000358525 EHMT1Q9H9B1 1298 aa16.64■□□□□ 0.26
SLC6A20-202ENST00000358525 PRDM1O75626 825 aa16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 LPIN2Q92539 896 aa16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 DEXIO95424 95 aa16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 CCDC175P0C221 793 aa16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 NEFHP12036 1026 aa16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 ZNF75DP51815 510 aa16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 KARSQ15046 597 aaKnown RBP16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 RILPL1Q5EBL4 403 aa16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 TLR7Q9NYK1 1049 aaKnown RBP16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 KCNH3Q9ULD8 1083 aa16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 MTMR6Q9Y217 621 aa16.64■□□□□ 0.25
SLC6A20-202ENST00000358525 TCIRG1Q13488 830 aa16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 FEZ1Q99689 392 aa16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 RRP36Q96EU6 259 aaKnown RBP16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 PTCH1Q13635 1447 aa16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 ADCK5Q3MIX3 580 aa16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 SPATA5Q8NB90 893 aa16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 TMCO5BA8MYB1 307 aa16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 ERVV-2B6SEH9 535 aa16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 DIS3L2Q8IYB7 885 aaKnown RBP16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 LRRIQ1Q96JM4 1722 aa16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 RNF17Q9BXT8 1623 aaKnown RBP16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 GNPATO15228 680 aa16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 CYLC1P35663 651 aaPredicted RBP16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 NOP2P46087 812 aaKnown RBP16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 EHBP1Q8NDI1 1231 aa16.63■□□□□ 0.25
SLC6A20-202ENST00000358525 GLI2P10070 1586 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 LRRC24Q50LG9 513 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 IQUBQ8NA54 791 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 CDC42BPBQ9Y5S2 1711 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 GTF2F1P35269 517 aaKnown RBP eCLIP16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 LZTFL1Q9NQ48 299 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms