RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 RTEL1Q9NZ71 1219 aa23.79■■□□□ 1.4
COL13A1-202ENST00000357811 ZHX1Q9UKY1 873 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-202ENST00000357811 PHKA1P46020 1223 aa23.79■■□□□ 1.4
COL13A1-202ENST00000357811 TRDNQ13061 729 aa23.79■■□□□ 1.4
COL13A1-202ENST00000357811 GNL2Q13823 731 aaKnown RBP23.79■■□□□ 1.4
COL13A1-202ENST00000357811 TRMT112Q9UI30 125 aaKnown RBP23.79■■□□□ 1.4
COL13A1-202ENST00000357811 ZBTB38Q8NAP3 1195 aaPredicted RBP23.78■■□□□ 1.4
COL13A1-202ENST00000357811 ATG3Q9NT62 314 aa23.78■■□□□ 1.4
COL13A1-202ENST00000357811 WWC3Q9ULE0 1092 aa23.78■■□□□ 1.4
COL13A1-202ENST00000357811 TTLL11Q8NHH1 800 aa23.78■■□□□ 1.4
COL13A1-202ENST00000357811 PCCAP05165 728 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-202ENST00000357811 LRRFIP1Q32MZ4 808 aaKnown RBP23.77■■□□□ 1.4
COL13A1-202ENST00000357811 NFXL1Q6ZNB6 911 aa23.77■■□□□ 1.4
COL13A1-202ENST00000357811 NPHP1O15259 732 aa23.77■■□□□ 1.4
COL13A1-202ENST00000357811 WDHD1O75717 1129 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-202ENST00000357811 ZNF202O95125 648 aa23.77■■□□□ 1.4
COL13A1-202ENST00000357811 ZFYP08048 801 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-202ENST00000357811 KLHL34Q8N239 644 aa23.77■■□□□ 1.4
COL13A1-202ENST00000357811 TOMM22Q9NS69 142 aa23.77■■□□□ 1.4
COL13A1-202ENST00000357811 KIAA1468Q9P260 1216 aa23.77■■□□□ 1.4
COL13A1-202ENST00000357811 ZNF532Q9HCE3 1301 aa23.77■■□□□ 1.4
COL13A1-202ENST00000357811 DHX16O60231 1041 aaKnown RBP23.76■■□□□ 1.39
COL13A1-202ENST00000357811 LMOD1P29536 600 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-202ENST00000357811 HSP90AA4PQ58FG1 418 aa23.76■■□□□ 1.39
COL13A1-202ENST00000357811 SPECC1Q5M775 1068 aa23.76■■□□□ 1.39
COL13A1-202ENST00000357811 ALG1Q9BT22 464 aa23.76■■□□□ 1.39
COL13A1-202ENST00000357811 RIPOR2Q9Y4F9 1068 aa23.76■■□□□ 1.39
COL13A1-202ENST00000357811 ADAMTSL3P82987 1691 aa23.76■■□□□ 1.39
COL13A1-202ENST00000357811 CDC27P30260 824 aa23.76■■□□□ 1.39
COL13A1-202ENST00000357811 CLIC6Q96NY7 704 aa23.76■■□□□ 1.39
COL13A1-202ENST00000357811 IFNKQ9P0W0 207 aa23.76■■□□□ 1.39
COL13A1-202ENST00000357811 CPDO75976 1380 aa23.76■■□□□ 1.39
COL13A1-202ENST00000357811 KCPQ6ZWJ8 1503 aa23.76■■□□□ 1.39
COL13A1-202ENST00000357811 IRS4O14654 1257 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-202ENST00000357811 SLC3A2P08195 630 aaKnown RBP23.76■■□□□ 1.39
COL13A1-202ENST00000357811 METAP2P50579 478 aaKnown RBP eCLIP23.76■■□□□ 1.39
COL13A1-202ENST00000357811 KIF23Q02241 960 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-202ENST00000357811 RRP12Q5JTH9 1297 aaKnown RBP23.76■■□□□ 1.39
COL13A1-202ENST00000357811 PFKFB1P16118 471 aa23.75■■□□□ 1.39
COL13A1-202ENST00000357811 ANO1Q5XXA6 986 aa23.75■■□□□ 1.39
COL13A1-202ENST00000357811 CEP135Q66GS9 1140 aa23.75■■□□□ 1.39
COL13A1-202ENST00000357811 CCDC112Q8NEF3 446 aa23.75■■□□□ 1.39
COL13A1-202ENST00000357811 MRFAP1L1Q96HT8 127 aa23.75■■□□□ 1.39
COL13A1-202ENST00000357811 ZKSCAN3Q9BRR0 538 aa23.75■■□□□ 1.39
COL13A1-202ENST00000357811 MROH7-TTC4A0A0A0MT08 1334 aa23.75■■□□□ 1.39
COL13A1-202ENST00000357811 CTDSPL2Q05D32 466 aa23.75■■□□□ 1.39
COL13A1-202ENST00000357811 NLRP10Q86W26 655 aa23.75■■□□□ 1.39
COL13A1-202ENST00000357811 CMTR1Q8N1G2 835 aaKnown RBP23.75■■□□□ 1.39
COL13A1-202ENST00000357811 XPO4Q9C0E2 1151 aaKnown RBP23.75■■□□□ 1.39
COL13A1-202ENST00000357811 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.75■■□□□ 1.39
COL13A1-202ENST00000357811 TJP1Q07157 1748 aa23.75■■□□□ 1.39
COL13A1-202ENST00000357811 CAVIN2O95810 425 aa23.74■■□□□ 1.39
COL13A1-202ENST00000357811 TMC6Q7Z403 805 aa23.74■■□□□ 1.39
COL13A1-202ENST00000357811 ZBTB1Q9Y2K1 713 aa23.74■■□□□ 1.39
COL13A1-202ENST00000357811 NCBP1Q09161 790 aaKnown RBP23.74■■□□□ 1.39
COL13A1-202ENST00000357811 SARM1Q6SZW1 724 aa23.74■■□□□ 1.39
COL13A1-202ENST00000357811 KCNG4Q8TDN1 519 aa23.74■■□□□ 1.39
COL13A1-202ENST00000357811 CARD10Q9BWT7 1032 aa23.74■■□□□ 1.39
COL13A1-202ENST00000357811 ANKRD18BA2A2Z9 1011 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 IGSF3O75054 1194 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 STARD3NLO95772 234 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 CSF1RP07333 972 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 ADD2P35612 726 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 VPS37DQ86XT2 251 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 NAT10Q9H0A0 1025 aaKnown RBP23.73■■□□□ 1.39
COL13A1-202ENST00000357811 CCDC102BQ68D86 513 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.73■■□□□ 1.39
COL13A1-202ENST00000357811 ANGEL1Q9UNK9 670 aaKnown RBP23.73■■□□□ 1.39
COL13A1-202ENST00000357811 ATP1A3P13637 1013 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 EVCP57679 992 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 NKX1-1Q15270 411 aaPredicted RBP23.73■■□□□ 1.39
COL13A1-202ENST00000357811 NBPF11Q86T75 865 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 NEDD4P46934 1319 aa23.73■■□□□ 1.39
COL13A1-202ENST00000357811 PKD1L3Q7Z443 1732 aa23.72■■□□□ 1.39
COL13A1-202ENST00000357811 ATP2B1P20020 1258 aa23.72■■□□□ 1.39
COL13A1-202ENST00000357811 CTSWP56202 376 aa23.72■■□□□ 1.39
COL13A1-202ENST00000357811 CCZ1BP86790 482 aa23.72■■□□□ 1.39
COL13A1-202ENST00000357811 CCZ1P86791 482 aaPredicted RBP23.72■■□□□ 1.39
COL13A1-202ENST00000357811 ATL3Q6DD88 541 aa23.72■■□□□ 1.39
COL13A1-202ENST00000357811 GIGYF2Q6Y7W6 1299 aaKnown RBP23.72■■□□□ 1.39
COL13A1-202ENST00000357811 IQSEC3Q9UPP2 1182 aaPredicted RBP23.72■■□□□ 1.39
COL13A1-202ENST00000357811 PTPN14Q15678 1187 aa23.72■■□□□ 1.39
COL13A1-202ENST00000357811 KRT40Q6A162 431 aa23.72■■□□□ 1.39
COL13A1-202ENST00000357811 AIDAQ96BJ3 306 aa23.72■■□□□ 1.39
COL13A1-202ENST00000357811 SLC4A9Q96Q91 983 aa23.72■■□□□ 1.39
COL13A1-202ENST00000357811 COL5A2P05997 1499 aaPredicted RBP23.72■■□□□ 1.39
COL13A1-202ENST00000357811 MAP3K15Q6ZN16 1313 aa23.71■■□□□ 1.39
COL13A1-202ENST00000357811 PDE6AP16499 860 aa23.71■■□□□ 1.39
COL13A1-202ENST00000357811 POLR3EQ9NVU0 708 aa23.71■■□□□ 1.39
COL13A1-202ENST00000357811 STRCP1A6NGW2 1772 aa23.71■■□□□ 1.39
COL13A1-202ENST00000357811 RIC1Q4ADV7 1423 aa23.71■■□□□ 1.39
COL13A1-202ENST00000357811 CDC25BP30305 580 aa23.71■■□□□ 1.39
COL13A1-202ENST00000357811 AXDND1Q5T1B0 1012 aaPredicted RBP23.71■■□□□ 1.39
COL13A1-202ENST00000357811 NWD2Q9ULI1 1742 aa23.71■■□□□ 1.39
COL13A1-202ENST00000357811 SMTNL1A8MU46 457 aa23.7■■□□□ 1.39
COL13A1-202ENST00000357811 GOLGA8FQ08AF8 430 aa23.7■■□□□ 1.39
COL13A1-202ENST00000357811 GOLGA8DPQ0D2H9 430 aa23.7■■□□□ 1.39
COL13A1-202ENST00000357811 APOA5Q6Q788 366 aa23.7■■□□□ 1.39
COL13A1-202ENST00000357811 PNOCQ13519 176 aa23.7■■□□□ 1.38
COL13A1-202ENST00000357811 ARMT1Q9H993 441 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms