RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CARD6Q9BX69 1037 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 IMPG2Q9BZV3 1241 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 KCNK9Q9NPC2 374 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 IQSEC3Q9UPP2 1182 aaPredicted RBP16.71■□□□□ 0.27
CHD4-201ENST00000357008 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 CYP26C1Q6V0L0 522 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 CCDC160A6NGH7 325 aa16.71■□□□□ 0.26
CHD4-201ENST00000357008 ANO1Q5XXA6 986 aa16.71■□□□□ 0.26
CHD4-201ENST00000357008 UBLCP1Q8WVY7 318 aaPredicted RBP16.71■□□□□ 0.26
CHD4-201ENST00000357008 TESK2Q96S53 571 aa16.71■□□□□ 0.26
CHD4-201ENST00000357008 RBM28Q9NW13 759 aaKnown RBP16.71■□□□□ 0.26
CHD4-201ENST00000357008 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 AOX1Q06278 1338 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
CHD4-201ENST00000357008 CCDC50Q8IVM0 306 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 ZBTB9Q96C00 473 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 SMARCC2Q8TAQ2 1214 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 LRRC45Q96CN5 670 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 FAM13AO94988 1023 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 PPP1R7Q15435 360 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 ELF2Q15723 593 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 CWF19L2Q2TBE0 894 aaKnown RBP16.7■□□□□ 0.26
CHD4-201ENST00000357008 NDUFAB1O14561 156 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 TBC1D8BQ0IIM8 1120 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 KCNH3Q9ULD8 1083 aa16.7■□□□□ 0.26
CHD4-201ENST00000357008 CCDC25Q86WR0 208 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 CCDC63Q8NA47 563 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 MSH6P52701 1360 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 ATP2A2P16615 1042 aaKnown RBP16.69■□□□□ 0.26
CHD4-201ENST00000357008 GJC1P36383 396 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 MAP3K9P80192 1104 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 RPL13P26373 211 aaKnown RBP16.69■□□□□ 0.26
CHD4-201ENST00000357008 NAP1L3Q99457 506 aaPredicted RBP16.69■□□□□ 0.26
CHD4-201ENST00000357008 SNX14Q9Y5W7 946 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 C8orf74Q6P047 294 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 NBPF5PQ86XG9 351 aaPredicted RBP16.69■□□□□ 0.26
CHD4-201ENST00000357008 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 LMBRD1Q9NUN5 540 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 PTPRKQ15262 1439 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 VWA3AA6NCI4 1184 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 SLC27A2O14975 620 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 PLCD1P51178 756 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 KRT24Q2M2I5 525 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 PPFIBP2Q8ND30 876 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 NOC4LQ9BVI4 516 aaKnown RBP16.69■□□□□ 0.26
CHD4-201ENST00000357008 NKIRAS1Q9NYS0 192 aa16.69■□□□□ 0.26
CHD4-201ENST00000357008 ZFYVE9O95405 1425 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 ARHGAP6O43182 974 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 ATP5DP30049 168 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 TNNI2P48788 182 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 MLKLQ8NB16 471 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 IFT74Q96LB3 600 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 GPATCH8Q9UKJ3 1502 aaKnown RBP16.68■□□□□ 0.26
CHD4-201ENST00000357008 RXRAP19793 462 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 VWA3BQ502W6 1294 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 A0A1B0GUA9 196 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 CTNND2Q9UQB3 1225 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 KDM5BQ9UGL1 1544 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 ALDH3A1P30838 453 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 MAGEB6Q8N7X4 407 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
CHD4-201ENST00000357008 PHACTR3Q96KR7 559 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 FLT4P35916 1363 aa16.68■□□□□ 0.26
CHD4-201ENST00000357008 GOLGA6CA6NDK9 693 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 PABPN1LA6NDY0 278 aaKnown RBP16.67■□□□□ 0.26
CHD4-201ENST00000357008 SPDYE3A6NKU9 549 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 GOLGA6DP0CG33 693 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 ZCRB1Q8TBF4 217 aaKnown RBP16.67■□□□□ 0.26
CHD4-201ENST00000357008 GOLGA6AQ9NYA3 693 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 SEL1L2Q5TEA6 688 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 INTS8Q75QN2 995 aaKnown RBP16.67■□□□□ 0.26
CHD4-201ENST00000357008 SV2BQ7L1I2 683 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 VPS16Q9H269 839 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 SEC62Q99442 399 aaKnown RBP16.67■□□□□ 0.26
CHD4-201ENST00000357008 SWAP70Q9UH65 585 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 INPP5BP32019 993 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 TMEM87BQ96K49 555 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 MAP3K5Q99683 1374 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 CUTAO60888 179 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 C17orf53Q8N3J3 647 aaPredicted RBP16.67■□□□□ 0.26
CHD4-201ENST00000357008 MPHOSPH6Q99547 160 aaKnown RBP16.67■□□□□ 0.26
CHD4-201ENST00000357008 TRIM7Q9C029 511 aa16.67■□□□□ 0.26
CHD4-201ENST00000357008 TMTC1Q8IUR5 882 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 VIMP08670 466 aaKnown RBP16.66■□□□□ 0.26
CHD4-201ENST00000357008 NLRP12P59046 1061 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 CCDC65Q8IXS2 484 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 BICC1Q9H694 974 aaKnown RBP16.66■□□□□ 0.26
CHD4-201ENST00000357008 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 SGSM2O43147 1006 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 OTUD7AQ8TE49 926 aaPredicted RBP16.66■□□□□ 0.26
CHD4-201ENST00000357008 EIF2AK4Q9P2K8 1649 aaKnown RBP16.66■□□□□ 0.26
CHD4-201ENST00000357008 DEXIO95424 95 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 RAPGEF1Q13905 1077 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 NAA25Q14CX7 972 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 ZNF174Q15697 407 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms