RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ZSWIM6Q9HCJ5 1215 aa18.03■□□□□ 0.48
RTN3-205ENST00000356000 TECPR2O15040 1411 aa18.03■□□□□ 0.48
RTN3-205ENST00000356000 A0A1B0GUA9 196 aa18.02■□□□□ 0.48
RTN3-205ENST00000356000 TUBBP07437 444 aa18.02■□□□□ 0.48
RTN3-205ENST00000356000 SPATS2LQ9NUQ6 558 aaKnown RBP18.02■□□□□ 0.48
RTN3-205ENST00000356000 PNPLA6Q8IY17 1366 aa18.02■□□□□ 0.48
RTN3-205ENST00000356000 C1orf167Q5SNV9 1468 aa18.02■□□□□ 0.48
RTN3-205ENST00000356000 ECM2O94769 699 aaPredicted RBP18.02■□□□□ 0.48
RTN3-205ENST00000356000 RXRBP28702 533 aa18.02■□□□□ 0.48
RTN3-205ENST00000356000 IRAK1P51617 712 aa18.02■□□□□ 0.48
RTN3-205ENST00000356000 VSNL1P62760 191 aa18.02■□□□□ 0.48
RTN3-205ENST00000356000 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.47
RTN3-205ENST00000356000 MYBL2P10244 700 aa18.02■□□□□ 0.47
RTN3-205ENST00000356000 RWDD2BP57060 319 aa18.02■□□□□ 0.47
RTN3-205ENST00000356000 TMEM139Q8IV31 216 aa18.02■□□□□ 0.47
RTN3-205ENST00000356000 ERCC4Q92889 916 aaPredicted RBP18.02■□□□□ 0.47
RTN3-205ENST00000356000 NUCKS1Q9H1E3 243 aaKnown RBP18.02■□□□□ 0.47
RTN3-205ENST00000356000 METP08581 1390 aa18.01■□□□□ 0.47
RTN3-205ENST00000356000 LARP1Q6PKG0 1096 aaKnown RBP18.01■□□□□ 0.47
RTN3-205ENST00000356000 ANKRD18AQ8IVF6 992 aa18.01■□□□□ 0.47
RTN3-205ENST00000356000 CCAR1Q8IX12 1150 aaKnown RBP18.01■□□□□ 0.47
RTN3-205ENST00000356000 IGSF22Q8N9C0 903 aa18.01■□□□□ 0.47
RTN3-205ENST00000356000 SMARCC1Q92922 1105 aaPredicted RBP18.01■□□□□ 0.47
RTN3-205ENST00000356000 CYP46A1Q9Y6A2 500 aa18.01■□□□□ 0.47
RTN3-205ENST00000356000 KIF1AQ12756 1690 aa18.01■□□□□ 0.47
RTN3-205ENST00000356000 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
RTN3-205ENST00000356000 TEX13AQ9BXU3 409 aaPredicted RBP18.01■□□□□ 0.47
RTN3-205ENST00000356000 KAT14Q9H8E8 782 aa18.01■□□□□ 0.47
RTN3-205ENST00000356000 ENGASEQ8NFI3 743 aa18■□□□□ 0.47
RTN3-205ENST00000356000 GOLPH3LQ9H4A5 285 aa18■□□□□ 0.47
RTN3-205ENST00000356000 TPCN1Q9ULQ1 816 aa18■□□□□ 0.47
RTN3-205ENST00000356000 KINO60870 393 aaKnown RBP18■□□□□ 0.47
RTN3-205ENST00000356000 OS9Q13438 667 aaPredicted RBP18■□□□□ 0.47
RTN3-205ENST00000356000 CCDC12Q8WUD4 166 aaPredicted RBP18■□□□□ 0.47
RTN3-205ENST00000356000 JAKMIP1Q96N16 626 aaKnown RBP18■□□□□ 0.47
RTN3-205ENST00000356000 CFAP45Q9UL16 551 aa18■□□□□ 0.47
RTN3-205ENST00000356000 SHTN1A0MZ66 631 aa17.99■□□□□ 0.47
RTN3-205ENST00000356000 EME2A4GXA9 379 aaPredicted RBP17.99■□□□□ 0.47
RTN3-205ENST00000356000 CLNS1AP54105 237 aaKnown RBP17.99■□□□□ 0.47
RTN3-205ENST00000356000 TRAF1Q13077 416 aa17.99■□□□□ 0.47
RTN3-205ENST00000356000 RESTQ13127 1097 aa17.99■□□□□ 0.47
RTN3-205ENST00000356000 ADCK5Q3MIX3 580 aa17.99■□□□□ 0.47
RTN3-205ENST00000356000 BCAS4Q8TDM0 211 aa17.99■□□□□ 0.47
RTN3-205ENST00000356000 PUF60Q9UHX1 559 aaKnown RBP17.99■□□□□ 0.47
RTN3-205ENST00000356000 CDC23Q9UJX2 597 aa17.99■□□□□ 0.47
RTN3-205ENST00000356000 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
RTN3-205ENST00000356000 FANCCQ00597 558 aa17.98■□□□□ 0.47
RTN3-205ENST00000356000 KIF4BQ2VIQ3 1234 aa17.98■□□□□ 0.47
RTN3-205ENST00000356000 CCDC73Q6ZRK6 1079 aa17.98■□□□□ 0.47
RTN3-205ENST00000356000 KLC4Q9NSK0 619 aa17.98■□□□□ 0.47
RTN3-205ENST00000356000 PRKAR2BP31323 418 aa17.98■□□□□ 0.47
RTN3-205ENST00000356000 TLDC1Q6P9B6 456 aa17.98■□□□□ 0.47
RTN3-205ENST00000356000 SOS2Q07890 1332 aaPredicted RBP17.98■□□□□ 0.47
RTN3-205ENST00000356000 QRICH2Q9H0J4 1663 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 ATP2B2Q01814 1243 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 FAM160A1Q05DH4 1040 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 TUBB2AQ13885 445 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 TUBB2BQ9BVA1 445 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 RPS6KL1Q9Y6S9 549 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 ADGRB1O14514 1584 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.97■□□□□ 0.47
RTN3-205ENST00000356000 ANKRD18BA2A2Z9 1011 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 NCAPHQ15003 741 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 IRAK4Q9NWZ3 460 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 FBXO3Q9UK99 471 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 ADGRF5Q8IZF2 1346 aa17.97■□□□□ 0.47
RTN3-205ENST00000356000 RBM5P52756 815 aaKnown RBP eCLIP17.96■□□□□ 0.47
RTN3-205ENST00000356000 SMTNP53814 917 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 WDR93Q6P2C0 686 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 FAM76AQ8TAV0 307 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 NGLY1Q96IV0 654 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
RTN3-205ENST00000356000 CPSF2Q9P2I0 782 aaKnown RBP17.96■□□□□ 0.47
RTN3-205ENST00000356000 ZC3H4Q9UPT8 1303 aaKnown RBP17.96■□□□□ 0.47
RTN3-205ENST00000356000 EIF3HO15372 352 aaKnown RBP eCLIP17.96■□□□□ 0.47
RTN3-205ENST00000356000 CAND2O75155 1236 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 RASSF9O75901 435 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 DPCR1Q3MIW9 517 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 B4GALNT4Q76KP1 1039 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 SPATS2Q86XZ4 545 aaKnown RBP17.96■□□□□ 0.47
RTN3-205ENST00000356000 MICAL1Q8TDZ2 1067 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 FBXW7Q969H0 707 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 PUS7Q96PZ0 661 aaKnown RBP17.96■□□□□ 0.47
RTN3-205ENST00000356000 DDX20Q9UHI6 824 aaKnown RBP17.96■□□□□ 0.47
RTN3-205ENST00000356000 RCOR1Q9UKL0 485 aa17.96■□□□□ 0.47
RTN3-205ENST00000356000 MEFVO15553 781 aaPredicted RBP17.95■□□□□ 0.46
RTN3-205ENST00000356000 RHOXF2BP0C7M4 288 aa17.95■□□□□ 0.46
RTN3-205ENST00000356000 GCKP35557 465 aa17.95■□□□□ 0.46
RTN3-205ENST00000356000 PPFIA1Q13136 1202 aa17.95■□□□□ 0.46
RTN3-205ENST00000356000 CEP85LQ5SZL2 805 aa17.95■□□□□ 0.46
RTN3-205ENST00000356000 RHOXF2Q9BQY4 288 aa17.95■□□□□ 0.46
RTN3-205ENST00000356000 MARF1Q9Y4F3 1742 aaKnown RBP17.95■□□□□ 0.46
RTN3-205ENST00000356000 GRIN2DO15399 1336 aa17.95■□□□□ 0.46
RTN3-205ENST00000356000 KIAA0754O94854 1291 aa17.95■□□□□ 0.46
RTN3-205ENST00000356000 ARID4AP29374 1257 aaPredicted RBP17.95■□□□□ 0.46
RTN3-205ENST00000356000 ARHGAP25P42331 645 aa17.95■□□□□ 0.46
RTN3-205ENST00000356000 RBBP5Q15291 538 aaKnown RBP17.95■□□□□ 0.46
RTN3-205ENST00000356000 RBM33Q96EV2 1170 aaKnown RBP17.95■□□□□ 0.46
RTN3-205ENST00000356000 HPCAL4Q9UM19 191 aa17.95■□□□□ 0.46
RTN3-205ENST00000356000 SNUPNO95149 360 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms