RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 MAGEC2Q9UBF1 373 aaPredicted RBP16.13■□□□□ 0.17
SREBF1-202ENST00000355815 NIP7Q9Y221 180 aaKnown RBP eCLIP16.13■□□□□ 0.17
SREBF1-202ENST00000355815 HSPD1P10809 573 aaKnown RBP16.13■□□□□ 0.17
SREBF1-202ENST00000355815 ADAMTS13Q76LX8 1427 aa16.13■□□□□ 0.17
SREBF1-202ENST00000355815 ADD1P35611 737 aaKnown RBP16.13■□□□□ 0.17
SREBF1-202ENST00000355815 CTR9Q6PD62 1173 aa16.13■□□□□ 0.17
SREBF1-202ENST00000355815 MFSD6Q6ZSS7 791 aa16.13■□□□□ 0.17
SREBF1-202ENST00000355815 BCCIPQ9P287 314 aaKnown RBP eCLIP16.13■□□□□ 0.17
SREBF1-202ENST00000355815 SLC4A4Q9Y6R1 1079 aa16.13■□□□□ 0.17
SREBF1-202ENST00000355815 MRPS27Q92552 414 aaKnown RBP16.12■□□□□ 0.17
SREBF1-202ENST00000355815 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
SREBF1-202ENST00000355815 NRBP1Q9UHY1 535 aa16.12■□□□□ 0.17
SREBF1-202ENST00000355815 KIAA1210Q9ULL0 1709 aa16.12■□□□□ 0.17
SREBF1-202ENST00000355815 PTPRUQ92729 1446 aa16.12■□□□□ 0.17
SREBF1-202ENST00000355815 SPTLC2O15270 562 aa16.12■□□□□ 0.17
SREBF1-202ENST00000355815 EIF5P55010 431 aaKnown RBP16.12■□□□□ 0.17
SREBF1-202ENST00000355815 SCRN1Q12765 414 aa16.12■□□□□ 0.17
SREBF1-202ENST00000355815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-202ENST00000355815 ZNF500O60304 480 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-202ENST00000355815 CYP7A1P22680 504 aa16.12■□□□□ 0.17
SREBF1-202ENST00000355815 PTPN21Q16825 1174 aa16.12■□□□□ 0.17
SREBF1-202ENST00000355815 GBP3Q9H0R5 595 aa16.12■□□□□ 0.17
SREBF1-202ENST00000355815 TMEM94Q12767 1356 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 RHOXF2BP0C7M4 288 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 RHOXF2Q9BQY4 288 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 COPRSQ9NQ92 184 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 SYKP43405 635 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 TERF1P54274 439 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 SSRP1Q08945 709 aaKnown RBP16.11■□□□□ 0.17
SREBF1-202ENST00000355815 NEK11Q8NG66 645 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 ARMT1Q9H993 441 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 DDIT3P35638 169 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 EPS15P42566 896 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 AFMP43652 599 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 CT47A1Q5JQC4 288 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-202ENST00000355815 BRMS1Q9HCU9 246 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 MBD4O95243 580 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 UBASH3AP57075 661 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 CTDSPL2Q05D32 466 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 ZFYVE27Q5T4F4 411 aa16.11■□□□□ 0.17
SREBF1-202ENST00000355815 CLTCQ00610 1675 aaKnown RBP16.11■□□□□ 0.17
SREBF1-202ENST00000355815 DEPDC5O75140 1603 aa16.1■□□□□ 0.17
SREBF1-202ENST00000355815 FGAP02671 866 aa16.1■□□□□ 0.17
SREBF1-202ENST00000355815 CYP2E1P05181 493 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-202ENST00000355815 DMTNQ08495 405 aa16.1■□□□□ 0.17
SREBF1-202ENST00000355815 AMOTL1Q8IY63 956 aa16.1■□□□□ 0.17
SREBF1-202ENST00000355815 TANGO6Q9C0B7 1094 aa16.1■□□□□ 0.17
SREBF1-202ENST00000355815 OVOS2A0A0J9YW53 1432 aa16.1■□□□□ 0.17
SREBF1-202ENST00000355815 OVOS2Q6IE36 1432 aa16.1■□□□□ 0.17
SREBF1-202ENST00000355815 CCDC113Q9H0I3 377 aa16.1■□□□□ 0.17
SREBF1-202ENST00000355815 USP31Q70CQ4 1352 aa16.1■□□□□ 0.17
SREBF1-202ENST00000355815 TMX4Q9H1E5 349 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-202ENST00000355815 IFNKQ9P0W0 207 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 PPLO60437 1756 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 PCDH11XQ9BZA7 1347 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 PCDH11YQ9BZA8 1340 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 TTC31Q49AM3 519 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-202ENST00000355815 CEP57Q86XR8 500 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 HAUS7Q99871 368 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 LZTFL1Q9NQ48 299 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 ZBTB22O15209 634 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 CCDC148Q8NFR7 591 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 GREM2Q9H772 168 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 SLAIN2Q9P270 581 aa16.09■□□□□ 0.17
SREBF1-202ENST00000355815 ZNF215Q9UL58 517 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-202ENST00000355815 FKBP15Q5T1M5 1219 aa16.08■□□□□ 0.17
SREBF1-202ENST00000355815 ZFYP08048 801 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-202ENST00000355815 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.16
SREBF1-202ENST00000355815 OSBP2Q969R2 916 aa16.08■□□□□ 0.16
SREBF1-202ENST00000355815 TTC14Q96N46 770 aa16.08■□□□□ 0.16
SREBF1-202ENST00000355815 VAT1LQ9HCJ6 419 aa16.08■□□□□ 0.16
SREBF1-202ENST00000355815 INCENPQ9NQS7 918 aa16.08■□□□□ 0.16
SREBF1-202ENST00000355815 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.16
SREBF1-202ENST00000355815 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
SREBF1-202ENST00000355815 EVCP57679 992 aa16.08■□□□□ 0.16
SREBF1-202ENST00000355815 TCIRG1Q13488 830 aa16.08■□□□□ 0.16
SREBF1-202ENST00000355815 UTP14AQ9BVJ6 771 aaKnown RBP16.08■□□□□ 0.16
SREBF1-202ENST00000355815 HELLSQ9NRZ9 838 aa16.08■□□□□ 0.16
SREBF1-202ENST00000355815 CTAGE5O15320 804 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 STX17P56962 302 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 WTAPQ15007 396 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 ERCC6LQ2NKX8 1250 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 AIFM3Q96NN9 605 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 NUP88Q99567 741 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-202ENST00000355815 CARD6Q9BX69 1037 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-202ENST00000355815 ANKIB1Q9P2G1 1089 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 CEP170BQ9Y4F5 1589 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-202ENST00000355815 SSH2Q76I76 1423 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 DACH1Q9UI36 760 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 ZHX3Q9H4I2 956 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 KCNJ14Q9UNX9 436 aa16.07■□□□□ 0.16
SREBF1-202ENST00000355815 ZNF532Q9HCE3 1301 aa16.06■□□□□ 0.16
SREBF1-202ENST00000355815 APPBP2Q92624 585 aa16.06■□□□□ 0.16
SREBF1-202ENST00000355815 GABPB1Q06547 395 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-202ENST00000355815 TOB2Q14106 344 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-202ENST00000355815 CLSTN2Q9H4D0 955 aa16.06■□□□□ 0.16
SREBF1-202ENST00000355815 ARHGEF28Q8N1W1 1705 aaKnown RBP16.06■□□□□ 0.16
SREBF1-202ENST00000355815 PHKA1P46020 1223 aa16.05■□□□□ 0.16
SREBF1-202ENST00000355815 COL9A3Q14050 684 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms