RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CAVIN4Q5BKX8 364 aa20.87■□□□□ 0.93
PDLIM7-201ENST00000355572 DZIP1LQ8IYY4 767 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-201ENST00000355572 SLC5A1P13866 664 aa20.86■□□□□ 0.93
PDLIM7-201ENST00000355572 CACNB3P54284 484 aa20.86■□□□□ 0.93
PDLIM7-201ENST00000355572 MKRN3Q13064 507 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-201ENST00000355572 LDLRAD1Q5T700 205 aa20.86■□□□□ 0.93
PDLIM7-201ENST00000355572 SERPINA10Q9UK55 444 aa20.86■□□□□ 0.93
PDLIM7-201ENST00000355572 ANGEL1Q9UNK9 670 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-201ENST00000355572 MYO5AQ9Y4I1 1855 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-201ENST00000355572 SRGAP3O43295 1099 aa20.85■□□□□ 0.93
PDLIM7-201ENST00000355572 GNAI3P08754 354 aa20.85■□□□□ 0.93
PDLIM7-201ENST00000355572 RASA3Q14644 834 aa20.85■□□□□ 0.93
PDLIM7-201ENST00000355572 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
PDLIM7-201ENST00000355572 CLMNQ96JQ2 1002 aa20.85■□□□□ 0.93
PDLIM7-201ENST00000355572 TEPSINQ96N21 525 aa20.85■□□□□ 0.93
PDLIM7-201ENST00000355572 BEGAINQ9BUH8 593 aa20.85■□□□□ 0.93
PDLIM7-201ENST00000355572 RNF186Q9NXI6 227 aa20.85■□□□□ 0.93
PDLIM7-201ENST00000355572 FBXO3Q9UK99 471 aa20.85■□□□□ 0.93
PDLIM7-201ENST00000355572 IPO8O15397 1037 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-201ENST00000355572 IL15P40933 162 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-201ENST00000355572 TFCP2Q12800 502 aa20.84■□□□□ 0.93
PDLIM7-201ENST00000355572 C1orf115Q9H7X2 142 aa20.84■□□□□ 0.93
PDLIM7-201ENST00000355572 CEP126Q9P2H0 1117 aa20.84■□□□□ 0.93
PDLIM7-201ENST00000355572 TCP10L2B9ZVM9 353 aa20.83■□□□□ 0.93
PDLIM7-201ENST00000355572 FRAT2O75474 233 aaPredicted RBP20.83■□□□□ 0.93
PDLIM7-201ENST00000355572 TRPA1O75762 1119 aa20.83■□□□□ 0.93
PDLIM7-201ENST00000355572 PRDX5P30044 214 aa20.83■□□□□ 0.93
PDLIM7-201ENST00000355572 TIMM10P62072 90 aa20.83■□□□□ 0.93
PDLIM7-201ENST00000355572 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.83■□□□□ 0.93
PDLIM7-201ENST00000355572 USP2O75604 605 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-201ENST00000355572 NF2P35240 595 aa20.82■□□□□ 0.92
PDLIM7-201ENST00000355572 MAP3K11Q16584 847 aa20.82■□□□□ 0.92
PDLIM7-201ENST00000355572 APOBEC3HQ6NTF7 200 aaKnown RBP20.82■□□□□ 0.92
PDLIM7-201ENST00000355572 TMEM39BQ9GZU3 492 aa20.82■□□□□ 0.92
PDLIM7-201ENST00000355572 MYO1BO43795 1136 aa20.81■□□□□ 0.92
PDLIM7-201ENST00000355572 GNAI2P04899 355 aa20.81■□□□□ 0.92
PDLIM7-201ENST00000355572 GJA5P36382 358 aa20.81■□□□□ 0.92
PDLIM7-201ENST00000355572 DIXDC1Q155Q3 683 aa20.81■□□□□ 0.92
PDLIM7-201ENST00000355572 TBC1D22AQ8WUA7 517 aa20.81■□□□□ 0.92
PDLIM7-201ENST00000355572 PPP2R3BQ9Y5P8 575 aa20.81■□□□□ 0.92
PDLIM7-201ENST00000355572 CCDC102BQ68D86 513 aa20.8■□□□□ 0.92
PDLIM7-201ENST00000355572 ARMC9Q7Z3E5 817 aa20.8■□□□□ 0.92
PDLIM7-201ENST00000355572 AK9Q5TCS8 1911 aa20.8■□□□□ 0.92
PDLIM7-201ENST00000355572 A0A1B0GUL7 405 aa20.79■□□□□ 0.92
PDLIM7-201ENST00000355572 CA12O43570 354 aa20.79■□□□□ 0.92
PDLIM7-201ENST00000355572 HDLBPQ00341 1268 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-201ENST00000355572 SPRYD7Q5W111 196 aa20.79■□□□□ 0.92
PDLIM7-201ENST00000355572 TEKT1Q969V4 418 aa20.79■□□□□ 0.92
PDLIM7-201ENST00000355572 ZDHHC15Q96MV8 337 aa20.79■□□□□ 0.92
PDLIM7-201ENST00000355572 RASGRF1Q13972 1273 aa20.78■□□□□ 0.92
PDLIM7-201ENST00000355572 POLA2Q14181 598 aa20.78■□□□□ 0.92
PDLIM7-201ENST00000355572 PANK1Q8TE04 598 aa20.78■□□□□ 0.92
PDLIM7-201ENST00000355572 XAGE2Q96GT9 111 aa20.78■□□□□ 0.92
PDLIM7-201ENST00000355572 R3HDMLQ9H3Y0 253 aa20.78■□□□□ 0.92
PDLIM7-201ENST00000355572 DAGLAQ9Y4D2 1042 aa20.78■□□□□ 0.92
PDLIM7-201ENST00000355572 DOCK2Q92608 1830 aa20.77■□□□□ 0.92
PDLIM7-201ENST00000355572 ZBTB7BO15156 539 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-201ENST00000355572 PI16Q6UXB8 463 aa20.77■□□□□ 0.92
PDLIM7-201ENST00000355572 WDR66Q8TBY9 1149 aa20.77■□□□□ 0.92
PDLIM7-201ENST00000355572 ABHD8Q96I13 439 aa20.77■□□□□ 0.92
PDLIM7-201ENST00000355572 SAGE1Q9NXZ1 904 aa20.77■□□□□ 0.92
PDLIM7-201ENST00000355572 HDAC5Q9UQL6 1122 aa20.77■□□□□ 0.92
PDLIM7-201ENST00000355572 HHIPL2Q6UWX4 724 aa20.76■□□□□ 0.91
PDLIM7-201ENST00000355572 ZNF384Q8TF68 577 aa20.76■□□□□ 0.91
PDLIM7-201ENST00000355572 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
PDLIM7-201ENST00000355572 WNK4Q96J92 1243 aa20.76■□□□□ 0.91
PDLIM7-201ENST00000355572 MRIQ9BWK5 157 aa20.76■□□□□ 0.91
PDLIM7-201ENST00000355572 CDK5RAP2Q96SN8 1893 aa20.75■□□□□ 0.91
PDLIM7-201ENST00000355572 TBC1D8O95759 1140 aa20.75■□□□□ 0.91
PDLIM7-201ENST00000355572 TM4SF4P48230 202 aa20.75■□□□□ 0.91
PDLIM7-201ENST00000355572 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.75■□□□□ 0.91
PDLIM7-201ENST00000355572 ITPRIPQ8IWB1 547 aa20.75■□□□□ 0.91
PDLIM7-201ENST00000355572 MCOLN1Q9GZU1 580 aa20.75■□□□□ 0.91
PDLIM7-201ENST00000355572 SUGT1Q9Y2Z0 365 aa20.75■□□□□ 0.91
PDLIM7-201ENST00000355572 SALL1Q9NSC2 1324 aa20.75■□□□□ 0.91
PDLIM7-201ENST00000355572 ATP8B2P98198 1209 aa20.74■□□□□ 0.91
PDLIM7-201ENST00000355572 NFIAQ12857 509 aa20.74■□□□□ 0.91
PDLIM7-201ENST00000355572 SUPT20HL1Q3ZLR7 823 aa20.74■□□□□ 0.91
PDLIM7-201ENST00000355572 SSH3Q8TE77 659 aa20.74■□□□□ 0.91
PDLIM7-201ENST00000355572 DENND2AQ9ULE3 1009 aa20.74■□□□□ 0.91
PDLIM7-201ENST00000355572 PPP1R12BO60237 982 aaPredicted RBP20.73■□□□□ 0.91
PDLIM7-201ENST00000355572 TNFAIP1Q13829 316 aa20.73■□□□□ 0.91
PDLIM7-201ENST00000355572 CDC42EP5Q6NZY7 148 aa20.73■□□□□ 0.91
PDLIM7-201ENST00000355572 SLC10A4Q96EP9 437 aa20.73■□□□□ 0.91
PDLIM7-201ENST00000355572 MAST3O60307 1309 aa20.73■□□□□ 0.91
PDLIM7-201ENST00000355572 IGF2BP3O00425 579 aaKnown RBP eCLIP20.72■□□□□ 0.91
PDLIM7-201ENST00000355572 ZBTB22O15209 634 aa20.72■□□□□ 0.91
PDLIM7-201ENST00000355572 ZFPM1Q8IX07 1006 aa20.72■□□□□ 0.91
PDLIM7-201ENST00000355572 NEUROD6Q96NK8 337 aa20.72■□□□□ 0.91
PDLIM7-201ENST00000355572 ELP3Q9H9T3 547 aa20.72■□□□□ 0.91
PDLIM7-201ENST00000355572 SEMA3EO15041 775 aa20.71■□□□□ 0.91
PDLIM7-201ENST00000355572 LDHBP07195 334 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-201ENST00000355572 SLURP2P0DP57 97 aa20.71■□□□□ 0.91
PDLIM7-201ENST00000355572 DGKZQ13574 1117 aa20.71■□□□□ 0.91
PDLIM7-201ENST00000355572 FTSJ3Q8IY81 847 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-201ENST00000355572 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDLIM7-201ENST00000355572 GNL3LQ9NVN8 582 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-201ENST00000355572 HMG20BQ9P0W2 317 aa20.71■□□□□ 0.91
PDLIM7-201ENST00000355572 FAM198AQ9UFP1 575 aa20.71■□□□□ 0.91
PDLIM7-201ENST00000355572 MAST2Q6P0Q8 1798 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms