RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 BCAMP50895 628 aa16.06■□□□□ 0.16
EBF3-201ENST00000355311 ZNF75DP51815 510 aa16.06■□□□□ 0.16
EBF3-201ENST00000355311 DDX19AQ9NUU7 478 aaKnown RBP16.06■□□□□ 0.16
EBF3-201ENST00000355311 CDC27P30260 824 aa16.06■□□□□ 0.16
EBF3-201ENST00000355311 DPCR1Q3MIW9 517 aa16.06■□□□□ 0.16
EBF3-201ENST00000355311 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
EBF3-201ENST00000355311 NUP133Q8WUM0 1156 aa16.06■□□□□ 0.16
EBF3-201ENST00000355311 DSCC1Q9BVC3 393 aa16.06■□□□□ 0.16
EBF3-201ENST00000355311 SH3TC1Q8TE82 1336 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 TPD52L1Q16890 204 aaPredicted RBP16.05■□□□□ 0.16
EBF3-201ENST00000355311 FAM182BQ5T319 152 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 SMARCC2Q8TAQ2 1214 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 TNS3Q68CZ2 1445 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 ERVV-2B6SEH9 535 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 SMC2O95347 1197 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 CCDC102BQ68D86 513 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 SLC51AQ86UW1 340 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
EBF3-201ENST00000355311 PDILTQ8N807 584 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 ISCA1Q9BUE6 129 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 KCNJ14Q9UNX9 436 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 HPS5Q9UPZ3 1129 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 MINDY4BA8MYZ0 360 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 PRDM1O75626 825 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 STARD3NLO95772 234 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 LMOD1P29536 600 aaPredicted RBP16.05■□□□□ 0.16
EBF3-201ENST00000355311 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 ANKRD7Q92527 254 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 NBPF3Q9H094 633 aa16.05■□□□□ 0.16
EBF3-201ENST00000355311 AFDNP55196 1824 aaKnown RBP16.04■□□□□ 0.16
EBF3-201ENST00000355311 EVX2Q03828 476 aa16.04■□□□□ 0.16
EBF3-201ENST00000355311 TRDNQ13061 729 aa16.04■□□□□ 0.16
EBF3-201ENST00000355311 ZSCAN25Q6NSZ9 544 aa16.04■□□□□ 0.16
EBF3-201ENST00000355311 KIF1AQ12756 1690 aa16.04■□□□□ 0.16
EBF3-201ENST00000355311 CYP2D7A0A087X1C5 515 aa16.04■□□□□ 0.16
EBF3-201ENST00000355311 ANKRD18BA2A2Z9 1011 aa16.04■□□□□ 0.16
EBF3-201ENST00000355311 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
EBF3-201ENST00000355311 AIDAQ96BJ3 306 aa16.04■□□□□ 0.16
EBF3-201ENST00000355311 COBLO75128 1261 aa16.03■□□□□ 0.16
EBF3-201ENST00000355311 GUCY1A2P33402 732 aa16.03■□□□□ 0.16
EBF3-201ENST00000355311 ZBTB38Q8NAP3 1195 aaPredicted RBP16.03■□□□□ 0.16
EBF3-201ENST00000355311 NCOA7Q8NI08 942 aa16.03■□□□□ 0.16
EBF3-201ENST00000355311 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
EBF3-201ENST00000355311 WDHD1O75717 1129 aaPredicted RBP16.03■□□□□ 0.16
EBF3-201ENST00000355311 SDR42E1Q8WUS8 393 aa16.03■□□□□ 0.16
EBF3-201ENST00000355311 ALG1Q9BT22 464 aa16.03■□□□□ 0.16
EBF3-201ENST00000355311 RIPOR2Q9Y4F9 1068 aa16.03■□□□□ 0.16
EBF3-201ENST00000355311 PHRF1Q9P1Y6 1649 aaKnown RBP16.03■□□□□ 0.16
EBF3-201ENST00000355311 ELP1O95163 1332 aa16.03■□□□□ 0.16
EBF3-201ENST00000355311 FOXN1O15353 648 aa16.02■□□□□ 0.16
EBF3-201ENST00000355311 MBD4O95243 580 aa16.02■□□□□ 0.16
EBF3-201ENST00000355311 FAM177A1Q8N128 213 aaPredicted RBP16.02■□□□□ 0.16
EBF3-201ENST00000355311 APPBP2Q92624 585 aa16.02■□□□□ 0.16
EBF3-201ENST00000355311 SLC26A6Q9BXS9 759 aa16.02■□□□□ 0.16
EBF3-201ENST00000355311 RCOR1Q9UKL0 485 aa16.02■□□□□ 0.16
EBF3-201ENST00000355311 TACC3Q9Y6A5 838 aa16.02■□□□□ 0.16
EBF3-201ENST00000355311 NEDD4P46934 1319 aa16.02■□□□□ 0.16
EBF3-201ENST00000355311 GOLGA6L6A8MZA4 724 aa16.02■□□□□ 0.16
EBF3-201ENST00000355311 HMGB1P09429 215 aaKnown RBP16.02■□□□□ 0.16
EBF3-201ENST00000355311 TNNT1P13805 278 aa16.02■□□□□ 0.16
EBF3-201ENST00000355311 METAP2P50579 478 aaKnown RBP eCLIP16.02■□□□□ 0.15
EBF3-201ENST00000355311 GIGYF2Q6Y7W6 1299 aaKnown RBP16.02■□□□□ 0.15
EBF3-201ENST00000355311 MPHOSPH8Q99549 860 aa16.02■□□□□ 0.15
EBF3-201ENST00000355311 CARD10Q9BWT7 1032 aa16.02■□□□□ 0.15
EBF3-201ENST00000355311 AKAP2Q9Y2D5 859 aa16.02■□□□□ 0.15
EBF3-201ENST00000355311 UBN2Q6ZU65 1347 aa16.01■□□□□ 0.15
EBF3-201ENST00000355311 ATP1A3P13637 1013 aa16.01■□□□□ 0.15
EBF3-201ENST00000355311 CDK11BP21127 795 aaKnown RBP16.01■□□□□ 0.15
EBF3-201ENST00000355311 CTSWP56202 376 aa16.01■□□□□ 0.15
EBF3-201ENST00000355311 GRIN1Q05586 938 aa16.01■□□□□ 0.15
EBF3-201ENST00000355311 IQCB1Q15051 598 aa16.01■□□□□ 0.15
EBF3-201ENST00000355311 GRAMD1CQ8IYS0 662 aa16.01■□□□□ 0.15
EBF3-201ENST00000355311 CTNNA3Q9UI47 895 aa16.01■□□□□ 0.15
EBF3-201ENST00000355311 SPTLC2O15270 562 aa16.01■□□□□ 0.15
EBF3-201ENST00000355311 ZNF827Q17R98 1081 aa16.01■□□□□ 0.15
EBF3-201ENST00000355311 SUSD4Q5VX71 490 aa16.01■□□□□ 0.15
EBF3-201ENST00000355311 ZNF396Q96N95 335 aaPredicted RBP16.01■□□□□ 0.15
EBF3-201ENST00000355311 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
EBF3-201ENST00000355311 PDE6AP16499 860 aa16■□□□□ 0.15
EBF3-201ENST00000355311 IRX5P78411 483 aaPredicted RBP16■□□□□ 0.15
EBF3-201ENST00000355311 PNOCQ13519 176 aa16■□□□□ 0.15
EBF3-201ENST00000355311 MB21D2Q8IYB1 491 aaPredicted RBP16■□□□□ 0.15
EBF3-201ENST00000355311 KCNQ2O43526 872 aa16■□□□□ 0.15
EBF3-201ENST00000355311 PCCAP05165 728 aaPredicted RBP16■□□□□ 0.15
EBF3-201ENST00000355311 SLFN14P0C7P3 912 aa16■□□□□ 0.15
EBF3-201ENST00000355311 TMEM67Q5HYA8 995 aa16■□□□□ 0.15
EBF3-201ENST00000355311 CREBRFQ8IUR6 639 aa16■□□□□ 0.15
EBF3-201ENST00000355311 LINC00301Q8NCQ3 95 aa16■□□□□ 0.15
EBF3-201ENST00000355311 ZSWIM5Q9P217 1185 aa16■□□□□ 0.15
EBF3-201ENST00000355311 OVOS2A0A0G2JMS6 1433 aa16■□□□□ 0.15
EBF3-201ENST00000355311 STRCP1A6NGW2 1772 aa16■□□□□ 0.15
EBF3-201ENST00000355311 STRCQ7RTU9 1775 aa16■□□□□ 0.15
EBF3-201ENST00000355311 SKILP12757 684 aa15.99■□□□□ 0.15
EBF3-201ENST00000355311 FAM160A1Q05DH4 1040 aa15.99■□□□□ 0.15
EBF3-201ENST00000355311 RASGRF1Q13972 1273 aa15.99■□□□□ 0.15
EBF3-201ENST00000355311 MYSM1Q5VVJ2 828 aa15.99■□□□□ 0.15
EBF3-201ENST00000355311 DHX40Q8IX18 779 aaKnown RBP15.99■□□□□ 0.15
EBF3-201ENST00000355311 FBXO18Q8NFZ0 1043 aa15.99■□□□□ 0.15
EBF3-201ENST00000355311 MRPS27Q92552 414 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms