RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 CCDC62Q6P9F0 684 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 PICK1Q9NRD5 415 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 MCM9Q9NXL9 1143 aa6.49□□□□□ -1.37
SRGAP1-201ENST00000355086 CASC4Q6P4E1 433 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 NCAPGQ9BPX3 1015 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 RHOXF2BP0C7M4 288 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 RHOXF2Q9BQY4 288 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 NIP7Q9Y221 180 aaKnown RBP eCLIP6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 ZNF853P0CG23 659 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 SH2D4BQ5SQS7 431 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 SPOUT1Q5T280 376 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 DNAJC25Q9H1X3 360 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 ATP6V1AP38606 617 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 VCXQ9H320 206 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 NKTRP30414 1462 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 MGEA5O60502 916 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 USP48Q86UV5 1035 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 NOP56O00567 594 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 HPDP32754 393 aaPredicted RBP6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 ANKRD13DQ6ZTN6 518 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 CDAN1Q8IWY9 1227 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 FAM200AQ8TCP9 573 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 CCDC169A6NNP5 214 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 PCK1P35558 622 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 STX17P56962 302 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 PLIN2Q99541 437 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 KRT28Q7Z3Y7 464 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 MRRFQ96E11 262 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 NOLC1Q14978 699 aaKnown RBP eCLIP6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 LMNTD2Q8IXW0 634 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 TTLL3Q9Y4R7 772 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 LRRC9Q6ZRR7 1453 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 MAP7Q14244 749 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 ARHGAP24Q8N264 748 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 WWC3Q9ULE0 1092 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 ANKRD24Q8TF21 1146 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 DACT1Q9NYF0 836 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 GINS2Q9Y248 185 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 PLEKHH2Q8IVE3 1493 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 SPTLC2O15270 562 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 DIXDC1Q155Q3 683 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 JDP2Q8WYK2 163 aa6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 RIOK1Q9BRS2 568 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-201ENST00000355086 PRR16Q569H4 304 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 GBP6Q6ZN66 633 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 CCDC186Q7Z3E2 898 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 NME9Q86XW9 330 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 RTL1A6NKG5 1358 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 CALUO43852 315 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 TNFAIP3P21580 790 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 HDXQ7Z353 690 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 CNPY2Q9Y2B0 182 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 LPXNO60711 386 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 RAPGEF3O95398 923 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 MAGEB6Q8N7X4 407 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 RBM8AQ9Y5S9 174 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 CETN3O15182 167 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 SLC9C2Q5TAH2 1124 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 MCUR1Q96AQ8 359 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 RBM28Q9NW13 759 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 NCOA2Q15596 1464 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 TUBB4AP04350 444 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 FAM114A2Q9NRY5 505 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 HMGB1P1B2RPK0 211 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 ZNF526Q8TF50 670 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 I3L4J1 428 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 VWA3BQ502W6 1294 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 CCDC122Q5T0U0 273 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 CNGA4Q8IV77 575 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 ZKSCAN3Q9BRR0 538 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 PPP1R12CQ9BZL4 782 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 DACT3Q96B18 629 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 SBNO2Q9Y2G9 1366 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 KIF21BO75037 1637 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 PLCB4Q15147 1175 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 TRAF5O00463 557 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 RAB3GAP1Q15042 981 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 TYRO3Q06418 890 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 MUM1L1Q5H9M0 696 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 TUBBP07437 444 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 NBPF8Q3BBV2 869 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 ZNF365Q70YC5 407 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 UBL4BQ8N7F7 174 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 RABGAP1Q9Y3P9 1069 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 STRN3Q13033 797 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 TTC22Q5TAA0 569 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 LIN9Q5TKA1 542 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 PARP3Q9Y6F1 533 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 TAOK1Q7L7X3 1001 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 HVCN1Q96D96 273 aa6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 NAP1L4Q99733 375 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-201ENST00000355086 TXNDC9O14530 226 aa6.46□□□□□ -1.37
SRGAP1-201ENST00000355086 BUB1BO60566 1050 aaPredicted RBP6.46□□□□□ -1.37
SRGAP1-201ENST00000355086 B4GALNT4Q76KP1 1039 aa6.46□□□□□ -1.37
SRGAP1-201ENST00000355086 TMOD4Q9NZQ9 345 aa6.46□□□□□ -1.37
SRGAP1-201ENST00000355086 GJA3Q9Y6H8 435 aa6.46□□□□□ -1.37
SRGAP1-201ENST00000355086 BMP2KLQ5H9B9 411 aa6.46□□□□□ -1.37
SRGAP1-201ENST00000355086 RPS6KA2Q15349 733 aa6.46□□□□□ -1.37
SRGAP1-201ENST00000355086 KLHL40Q2TBA0 621 aa6.46□□□□□ -1.37
SRGAP1-201ENST00000355086 IQUBQ8NA54 791 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms