RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 INTS13Q9NVM9 706 aa15.14■□□□□ 0.01
IFT88-202ENST00000351808 ZNF202O95125 648 aa15.14■□□□□ 0.01
IFT88-202ENST00000351808 PREPLQ4J6C6 727 aaPredicted RBP15.14■□□□□ 0.01
IFT88-202ENST00000351808 ZNF569Q5MCW4 686 aa15.14■□□□□ 0.01
IFT88-202ENST00000351808 SHTN1A0MZ66 631 aa15.13■□□□□ 0.01
IFT88-202ENST00000351808 CTAGE15A4D2H0 777 aa15.13■□□□□ 0.01
IFT88-202ENST00000351808 CTAGE8P0CG41 777 aa15.13■□□□□ 0.01
IFT88-202ENST00000351808 FLIIQ13045 1269 aa15.13■□□□□ 0.01
IFT88-202ENST00000351808 ADALQ6DHV7 355 aa15.13■□□□□ 0.01
IFT88-202ENST00000351808 CTAGE6Q86UF2 777 aa15.13■□□□□ 0.01
IFT88-202ENST00000351808 CTAGE4Q8IX94 777 aa15.13■□□□□ 0.01
IFT88-202ENST00000351808 FAM76AQ8TAV0 307 aa15.13■□□□□ 0.01
IFT88-202ENST00000351808 HPCAL4Q9UM19 191 aa15.13■□□□□ 0.01
IFT88-202ENST00000351808 GGCXP38435 758 aa15.13■□□□□ 0.01
IFT88-202ENST00000351808 NMIQ13287 307 aaPredicted RBP15.13■□□□□ 0.01
IFT88-202ENST00000351808 MAP2P11137 1827 aaKnown RBP15.13■□□□□ 0.01
IFT88-202ENST00000351808 CHD2O14647 1828 aaKnown RBP15.12■□□□□ 0.01
IFT88-202ENST00000351808 FRMD3A2A2Y4 597 aa15.12■□□□□ 0.01
IFT88-202ENST00000351808 ACTN3Q08043 901 aaPredicted RBP15.12■□□□□ 0.01
IFT88-202ENST00000351808 STK31Q9BXU1 1019 aa15.12■□□□□ 0.01
IFT88-202ENST00000351808 VIPAS39Q9H9C1 493 aa15.12■□□□□ 0.01
IFT88-202ENST00000351808 MYL5Q02045 173 aa15.12■□□□□ 0.01
IFT88-202ENST00000351808 RRS1Q15050 365 aaKnown RBP15.12■□□□□ 0.01
IFT88-202ENST00000351808 SF3A1Q15459 793 aaKnown RBP15.12■□□□□ 0.01
IFT88-202ENST00000351808 IQCA1Q86XH1 822 aa15.12■□□□□ 0.01
IFT88-202ENST00000351808 TRIM6Q9C030 488 aaPredicted RBP15.12■□□□□ 0.01
IFT88-202ENST00000351808 ALDH8A1Q9H2A2 487 aaPredicted RBP15.12■□□□□ 0.01
IFT88-202ENST00000351808 EFCAB6Q5THR3 1501 aa15.12■□□□□ 0.01
IFT88-202ENST00000351808 KIF5CO60282 957 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 CCDC175P0C221 793 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 AKAP17AQ02040 695 aaKnown RBP15.11■□□□□ 0.01
IFT88-202ENST00000351808 TBX2Q13207 712 aaPredicted RBP15.11■□□□□ 0.01
IFT88-202ENST00000351808 FMNL3Q8IVF7 1028 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 OTUD6BQ8N6M0 293 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 XAGE2Q96GT9 111 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 SEC62Q99442 399 aaKnown RBP15.11■□□□□ 0.01
IFT88-202ENST00000351808 LRRC2Q9BYS8 371 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 SH3BP1Q9Y3L3 701 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 ZC3H4Q9UPT8 1303 aaKnown RBP15.11■□□□□ 0.01
IFT88-202ENST00000351808 KLHL33A6NCF5 533 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 SOWAHDA6NJG2 315 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 TBC1D8BQ0IIM8 1120 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 NAA16Q6N069 864 aaPredicted RBP15.11■□□□□ 0.01
IFT88-202ENST00000351808 ILDR1Q86SU0 546 aaPredicted RBP15.11■□□□□ 0.01
IFT88-202ENST00000351808 KIRREL3Q8IZU9 778 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 CAPS2Q9BXY5 557 aa15.11■□□□□ 0.01
IFT88-202ENST00000351808 GOLGA6CA6NDK9 693 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 GOLGA6DP0CG33 693 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 ERCC3P19447 782 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 GNGT1P63211 74 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 STIM1Q13586 685 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 Q6ZUG5 572 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.1■□□□□ 0.01
IFT88-202ENST00000351808 CENPHQ9H3R5 247 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 GOLGA6AQ9NYA3 693 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 ZRANB1Q9UGI0 708 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 ARHGEF28Q8N1W1 1705 aaKnown RBP15.1■□□□□ 0.01
IFT88-202ENST00000351808 CTAGE9A4FU28 777 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 CCNHP51946 323 aaPredicted RBP15.1■□□□□ 0.01
IFT88-202ENST00000351808 TUBB4BP68371 445 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 IRX1P78414 480 aaPredicted RBP15.1■□□□□ 0.01
IFT88-202ENST00000351808 OS9Q13438 667 aaPredicted RBP15.1■□□□□ 0.01
IFT88-202ENST00000351808 EIF3HO15372 352 aaKnown RBP eCLIP15.1■□□□□ 0.01
IFT88-202ENST00000351808 PFKFB2O60825 505 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 POLA2Q14181 598 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 CRYMQ14894 314 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 SULT6B1Q6IMI4 303 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 WDR93Q6P2C0 686 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 AMOTL1Q8IY63 956 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 SLC35F6Q8N357 371 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 TSPYL4Q9UJ04 414 aa15.1■□□□□ 0.01
IFT88-202ENST00000351808 A0A1W2PQ27 194 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 A0A1W2PQ64 194 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 A0A1W2PQD8 194 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 KIAA0754O94854 1291 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 FSBPO95073 299 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 TUBBP07437 444 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 STK38Q15208 465 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 NUTM2GQ5VZR2 741 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 KLC4Q9NSK0 619 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 NPHP4O75161 1426 aaPredicted RBP15.09■□□□□ 0.01
IFT88-202ENST00000351808 GRIN2DO15399 1336 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 MAP3K5Q99683 1374 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 PPFIA1Q13136 1202 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 CEP57Q86XR8 500 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 SMARCC2Q8TAQ2 1214 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 CDC5LQ99459 802 aaKnown RBP15.09■□□□□ 0.01
IFT88-202ENST00000351808 ADGRG1Q9Y653 693 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 ADGRB3O60242 1522 aa15.09■□□□□ 0.01
IFT88-202ENST00000351808 AGPSO00116 658 aa15.08■□□□□ 0.01
IFT88-202ENST00000351808 SKAP2O75563 359 aaPredicted RBP15.08■□□□□ 0.01
IFT88-202ENST00000351808 WLSQ5T9L3 541 aa15.08■□□□□ 0.01
IFT88-202ENST00000351808 ATL3Q6DD88 541 aa15.08■□□□□ 0.01
IFT88-202ENST00000351808 NCAPH2Q6IBW4 605 aa15.08■□□□□ 0.01
IFT88-202ENST00000351808 NSUN7Q8NE18 718 aaKnown RBP15.08■□□□□ 0.01
IFT88-202ENST00000351808 EVI5LQ96CN4 794 aa15.08■□□□□ 0.01
IFT88-202ENST00000351808 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0.01
IFT88-202ENST00000351808 CLIC4Q9Y696 253 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms