RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 CCL15-CCL14A0A0B4J2E2 113 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 TCP10L2B9ZVM9 353 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 GRM8O00222 908 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 GYG1P46976 350 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 TNNI2P48788 182 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 TAF1CQ15572 869 aaPredicted RBP23.48■■□□□ 1.35
KDM5C-201ENST00000349663 CCL15Q16663 113 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 SLC9C1Q4G0N8 1177 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 CCDC184Q52MB2 194 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 CDAN1Q8IWY9 1227 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 CNKSR2Q8WXI2 1034 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 FAM84BQ96KN1 310 aaPredicted RBP23.48■■□□□ 1.35
KDM5C-201ENST00000349663 TMEM39BQ9GZU3 492 aa23.48■■□□□ 1.35
KDM5C-201ENST00000349663 VGLL4Q14135 290 aa23.47■■□□□ 1.35
KDM5C-201ENST00000349663 CSADQ9Y600 493 aa23.47■■□□□ 1.35
KDM5C-201ENST00000349663 CRKP46108 304 aa23.46■■□□□ 1.35
KDM5C-201ENST00000349663 EXOSC9Q06265 439 aaKnown RBP23.46■■□□□ 1.35
KDM5C-201ENST00000349663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.46■■□□□ 1.35
KDM5C-201ENST00000349663 C9orf78Q9NZ63 289 aaPredicted RBP23.46■■□□□ 1.35
KDM5C-201ENST00000349663 PTCH2Q9Y6C5 1203 aa23.46■■□□□ 1.35
KDM5C-201ENST00000349663 RBBP6Q7Z6E9 1792 aaKnown RBP23.45■■□□□ 1.34
KDM5C-201ENST00000349663 WDHD1O75717 1129 aaPredicted RBP23.45■■□□□ 1.34
KDM5C-201ENST00000349663 FAM43AQ8N2R8 423 aa23.45■■□□□ 1.34
KDM5C-201ENST00000349663 OTUD5Q96G74 571 aa23.45■■□□□ 1.34
KDM5C-201ENST00000349663 CACNA1FO60840 1977 aa23.45■■□□□ 1.34
KDM5C-201ENST00000349663 SLC4A8Q2Y0W8 1093 aa23.44■■□□□ 1.34
KDM5C-201ENST00000349663 WDR63Q8IWG1 891 aa23.44■■□□□ 1.34
KDM5C-201ENST00000349663 A0A1B0GUL6 1792 aa23.44■■□□□ 1.34
KDM5C-201ENST00000349663 FXR1P51114 621 aaKnown RBP eCLIP23.42■■□□□ 1.34
KDM5C-201ENST00000349663 VPS37DQ86XT2 251 aa23.42■■□□□ 1.34
KDM5C-201ENST00000349663 PUS3Q9BZE2 481 aaKnown RBP23.42■■□□□ 1.34
KDM5C-201ENST00000349663 SPDYE5A6NIY4 337 aa23.41■■□□□ 1.34
KDM5C-201ENST00000349663 ALDH1L1O75891 902 aa23.41■■□□□ 1.34
KDM5C-201ENST00000349663 CETPP11597 493 aa23.41■■□□□ 1.34
KDM5C-201ENST00000349663 HDLBPQ00341 1268 aaKnown RBP23.41■■□□□ 1.34
KDM5C-201ENST00000349663 KIF22Q14807 665 aa23.41■■□□□ 1.34
KDM5C-201ENST00000349663 FBXO33Q7Z6M2 555 aa23.41■■□□□ 1.34
KDM5C-201ENST00000349663 SALL2Q9Y467 1007 aaPredicted RBP23.41■■□□□ 1.34
KDM5C-201ENST00000349663 OTOFQ9HC10 1997 aa23.41■■□□□ 1.34
KDM5C-201ENST00000349663 MROH5Q6ZUA9 1318 aa23.4■■□□□ 1.34
KDM5C-201ENST00000349663 TLR2O60603 784 aa23.4■■□□□ 1.34
KDM5C-201ENST00000349663 GRIK5Q16478 980 aa23.4■■□□□ 1.34
KDM5C-201ENST00000349663 ERO1BQ86YB8 467 aa23.4■■□□□ 1.34
KDM5C-201ENST00000349663 TBC1D22AQ8WUA7 517 aa23.4■■□□□ 1.34
KDM5C-201ENST00000349663 ZCCHC17Q9NP64 241 aaKnown RBP23.4■■□□□ 1.34
KDM5C-201ENST00000349663 RIPOR2Q9Y4F9 1068 aa23.4■■□□□ 1.34
KDM5C-201ENST00000349663 FRAT2O75474 233 aaPredicted RBP23.39■■□□□ 1.33
KDM5C-201ENST00000349663 MYCP01106 439 aaPredicted RBP23.39■■□□□ 1.33
KDM5C-201ENST00000349663 CHAF1AQ13111 956 aaPredicted RBP23.39■■□□□ 1.33
KDM5C-201ENST00000349663 SLC4A10Q6U841 1118 aa23.39■■□□□ 1.33
KDM5C-201ENST00000349663 TEKT1Q969V4 418 aa23.39■■□□□ 1.33
KDM5C-201ENST00000349663 SRCIN1Q9C0H9 1055 aa23.39■■□□□ 1.33
KDM5C-201ENST00000349663 IQSEC3Q9UPP2 1182 aaPredicted RBP23.39■■□□□ 1.33
KDM5C-201ENST00000349663 COLQQ9Y215 455 aaPredicted RBP23.39■■□□□ 1.33
KDM5C-201ENST00000349663 SNCAIPQ9Y6H5 919 aa23.39■■□□□ 1.33
KDM5C-201ENST00000349663 BTBD19C9JJ37 291 aa23.38■■□□□ 1.33
KDM5C-201ENST00000349663 CACNB3P54284 484 aa23.38■■□□□ 1.33
KDM5C-201ENST00000349663 LACTBP83111 547 aaPredicted RBP23.38■■□□□ 1.33
KDM5C-201ENST00000349663 SNAPC2Q13487 334 aa23.38■■□□□ 1.33
KDM5C-201ENST00000349663 CAVIN4Q5BKX8 364 aa23.38■■□□□ 1.33
KDM5C-201ENST00000349663 SH3TC2Q8TF17 1288 aa23.38■■□□□ 1.33
KDM5C-201ENST00000349663 ZKSCAN4Q969J2 545 aaPredicted RBP23.38■■□□□ 1.33
KDM5C-201ENST00000349663 HOOK2Q96ED9 719 aa23.38■■□□□ 1.33
KDM5C-201ENST00000349663 SUCLG2Q96I99 432 aa23.38■■□□□ 1.33
KDM5C-201ENST00000349663 MRIQ9BWK5 157 aa23.38■■□□□ 1.33
KDM5C-201ENST00000349663 GNRH1P01148 92 aa23.37■■□□□ 1.33
KDM5C-201ENST00000349663 KAZALD1Q96I82 304 aa23.37■■□□□ 1.33
KDM5C-201ENST00000349663 WRNIP1Q96S55 665 aa23.37■■□□□ 1.33
KDM5C-201ENST00000349663 ARHGAP39Q9C0H5 1083 aa23.37■■□□□ 1.33
KDM5C-201ENST00000349663 TMOD2Q9NZR1 351 aa23.37■■□□□ 1.33
KDM5C-201ENST00000349663 CEP290O15078 2479 aa23.36■■□□□ 1.33
KDM5C-201ENST00000349663 IRF6O14896 467 aa23.36■■□□□ 1.33
KDM5C-201ENST00000349663 FKBP1CQ5VVH2 108 aa23.36■■□□□ 1.33
KDM5C-201ENST00000349663 FAM83AQ86UY5 434 aa23.36■■□□□ 1.33
KDM5C-201ENST00000349663 ZDHHC15Q96MV8 337 aa23.36■■□□□ 1.33
KDM5C-201ENST00000349663 PRMT2P55345 433 aa23.35■■□□□ 1.33
KDM5C-201ENST00000349663 PPIL2Q13356 520 aa23.35■■□□□ 1.33
KDM5C-201ENST00000349663 H0YGN5 161 aa23.34■■□□□ 1.33
KDM5C-201ENST00000349663 NBPF7P0C2Y1 421 aaPredicted RBP23.34■■□□□ 1.33
KDM5C-201ENST00000349663 METTL24Q5JXM2 366 aa23.34■■□□□ 1.33
KDM5C-201ENST00000349663 SPINK5Q9NQ38 1064 aaPredicted RBP23.34■■□□□ 1.33
KDM5C-201ENST00000349663 SZT2Q5T011 3432 aa23.33■■□□□ 1.33
KDM5C-201ENST00000349663 PDE8BO95263 885 aa23.33■■□□□ 1.33
KDM5C-201ENST00000349663 LRRC24Q50LG9 513 aa23.33■■□□□ 1.33
KDM5C-201ENST00000349663 DCAF15Q66K64 600 aa23.33■■□□□ 1.33
KDM5C-201ENST00000349663 APOBEC3HQ6NTF7 200 aaKnown RBP23.33■■□□□ 1.33
KDM5C-201ENST00000349663 SUGT1Q9Y2Z0 365 aa23.33■■□□□ 1.33
KDM5C-201ENST00000349663 ARAP2Q8WZ64 1704 aa23.33■■□□□ 1.32
KDM5C-201ENST00000349663 BCAMP50895 628 aa23.32■■□□□ 1.32
KDM5C-201ENST00000349663 PPATQ06203 517 aa23.32■■□□□ 1.32
KDM5C-201ENST00000349663 C17orf99Q6UX52 265 aa23.32■■□□□ 1.32
KDM5C-201ENST00000349663 BICC1Q9H694 974 aaKnown RBP23.32■■□□□ 1.32
KDM5C-201ENST00000349663 MRS2Q9HD23 443 aa23.32■■□□□ 1.32
KDM5C-201ENST00000349663 UTYO14607 1347 aa23.32■■□□□ 1.32
KDM5C-201ENST00000349663 RABL6Q3YEC7 729 aaPredicted RBP23.31■■□□□ 1.32
KDM5C-201ENST00000349663 HHIPL2Q6UWX4 724 aa23.31■■□□□ 1.32
KDM5C-201ENST00000349663 ZNF341Q9BYN7 854 aa23.31■■□□□ 1.32
KDM5C-201ENST00000349663 RANBP2P49792 3224 aaKnown RBP23.31■■□□□ 1.32
KDM5C-201ENST00000349663 MAST3O60307 1309 aa23.31■■□□□ 1.32
KDM5C-201ENST00000349663 MIGA2Q7L4E1 593 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms