RNA–Protein interactions for RNA: ENST00000348899.7

PMS2CL-201, Transcript of PMS2 C-terminal like pseudogene, humanhuman

TSL 3

Gene PMS2CL, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CL-201ENST00000348899 ATG9AQ7Z3C6 839 aa28.32■■■□□ 2.12
PMS2CL-201ENST00000348899 SLC10A4Q96EP9 437 aa28.32■■■□□ 2.12
PMS2CL-201ENST00000348899 FRAT2O75474 233 aaPredicted RBP28.31■■■□□ 2.12
PMS2CL-201ENST00000348899 USP2O75604 605 aaPredicted RBP28.31■■■□□ 2.12
PMS2CL-201ENST00000348899 CLMNQ96JQ2 1002 aa28.31■■■□□ 2.12
PMS2CL-201ENST00000348899 NOM1Q5C9Z4 860 aaKnown RBP28.3■■■□□ 2.12
PMS2CL-201ENST00000348899 MRIQ9BWK5 157 aa28.3■■■□□ 2.12
PMS2CL-201ENST00000348899 CFHR5Q9BXR6 569 aa28.3■■■□□ 2.12
PMS2CL-201ENST00000348899 FBXO3Q9UK99 471 aa28.3■■■□□ 2.12
PMS2CL-201ENST00000348899 ZBTB48P10074 688 aaPredicted RBP28.29■■■□□ 2.12
PMS2CL-201ENST00000348899 CTU1Q7Z7A3 348 aaKnown RBP28.29■■■□□ 2.12
PMS2CL-201ENST00000348899 LPIN2Q92539 896 aa28.29■■■□□ 2.12
PMS2CL-201ENST00000348899 TEPSINQ96N21 525 aa28.29■■■□□ 2.12
PMS2CL-201ENST00000348899 CIAO1O76071 339 aa28.28■■■□□ 2.12
PMS2CL-201ENST00000348899 IREB2P48200 963 aaKnown RBP28.28■■■□□ 2.12
PMS2CL-201ENST00000348899 ZNF296Q8WUU4 475 aaPredicted RBP28.28■■■□□ 2.12
PMS2CL-201ENST00000348899 ARHGAP45Q92619 1136 aa28.28■■■□□ 2.12
PMS2CL-201ENST00000348899 WNK4Q96J92 1243 aa28.28■■■□□ 2.12
PMS2CL-201ENST00000348899 SUGT1Q9Y2Z0 365 aa28.28■■■□□ 2.12
PMS2CL-201ENST00000348899 MANSC4A6NHS7 340 aaPredicted RBP28.27■■■□□ 2.12
PMS2CL-201ENST00000348899 SLC5A1P13866 664 aa28.27■■■□□ 2.12
PMS2CL-201ENST00000348899 INHBEP58166 350 aa28.27■■■□□ 2.12
PMS2CL-201ENST00000348899 HDAC5Q9UQL6 1122 aa28.27■■■□□ 2.12
PMS2CL-201ENST00000348899 LRRFIP2Q9Y608 721 aaKnown RBP28.27■■■□□ 2.12
PMS2CL-201ENST00000348899 CDAN1Q8IWY9 1227 aa28.26■■■□□ 2.11
PMS2CL-201ENST00000348899 TEKT1Q969V4 418 aa28.26■■■□□ 2.11
PMS2CL-201ENST00000348899 TCP10L2B9ZVM9 353 aa28.25■■■□□ 2.11
PMS2CL-201ENST00000348899 GPR25O00155 361 aa28.25■■■□□ 2.11
PMS2CL-201ENST00000348899 ANKRD13AQ8IZ07 590 aa28.25■■■□□ 2.11
PMS2CL-201ENST00000348899 ZDHHC15Q96MV8 337 aa28.25■■■□□ 2.11
PMS2CL-201ENST00000348899 MEIS3Q99687 375 aa28.25■■■□□ 2.11
PMS2CL-201ENST00000348899 ALDH1A1P00352 501 aa28.24■■■□□ 2.11
PMS2CL-201ENST00000348899 TNNI2P48788 182 aa28.24■■■□□ 2.11
PMS2CL-201ENST00000348899 INTS3Q68E01 1043 aaKnown RBP28.24■■■□□ 2.11
PMS2CL-201ENST00000348899 TMEM39BQ9GZU3 492 aa28.24■■■□□ 2.11
PMS2CL-201ENST00000348899 SIL1Q9H173 461 aa28.24■■■□□ 2.11
PMS2CL-201ENST00000348899 R3HDMLQ9H3Y0 253 aa28.24■■■□□ 2.11
PMS2CL-201ENST00000348899 GJA5P36382 358 aa28.23■■■□□ 2.11
PMS2CL-201ENST00000348899 APOBEC3HQ6NTF7 200 aaKnown RBP28.23■■■□□ 2.11
PMS2CL-201ENST00000348899 IFNL1Q8IU54 200 aa28.23■■■□□ 2.11
PMS2CL-201ENST00000348899 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.23■■■□□ 2.11
PMS2CL-201ENST00000348899 CEP126Q9P2H0 1117 aa28.23■■■□□ 2.11
PMS2CL-201ENST00000348899 MAST3O60307 1309 aa28.22■■■□□ 2.11
PMS2CL-201ENST00000348899 HHIPL2Q6UWX4 724 aa28.22■■■□□ 2.11
PMS2CL-201ENST00000348899 WDR66Q8TBY9 1149 aa28.22■■■□□ 2.11
PMS2CL-201ENST00000348899 COPRSQ9NQ92 184 aa28.22■■■□□ 2.11
PMS2CL-201ENST00000348899 IL15P40933 162 aaPredicted RBP28.21■■■□□ 2.11
PMS2CL-201ENST00000348899 ATP2B3Q16720 1220 aa28.21■■■□□ 2.11
PMS2CL-201ENST00000348899 PA2G4Q9UQ80 394 aaKnown RBP28.21■■■□□ 2.11
PMS2CL-201ENST00000348899 CACNB3P54284 484 aa28.2■■■□□ 2.1
PMS2CL-201ENST00000348899 MLLT1Q03111 559 aaPredicted RBP28.2■■■□□ 2.1
PMS2CL-201ENST00000348899 PKN2Q16513 984 aaKnown RBP28.2■■■□□ 2.1
PMS2CL-201ENST00000348899 FKBP1CQ5VVH2 108 aa28.2■■■□□ 2.1
PMS2CL-201ENST00000348899 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.2■■■□□ 2.1
PMS2CL-201ENST00000348899 IGF2BP3O00425 579 aaKnown RBP eCLIP28.19■■■□□ 2.1
PMS2CL-201ENST00000348899 FAM83AQ86UY5 434 aa28.19■■■□□ 2.1
PMS2CL-201ENST00000348899 TESPA1A2RU30 521 aaPredicted RBP28.18■■■□□ 2.1
PMS2CL-201ENST00000348899 ZBTB22O15209 634 aa28.18■■■□□ 2.1
PMS2CL-201ENST00000348899 FKTNO75072 461 aa28.18■■■□□ 2.1
PMS2CL-201ENST00000348899 LAMB1P07942 1786 aa28.18■■■□□ 2.1
PMS2CL-201ENST00000348899 GNAI3P08754 354 aa28.17■■■□□ 2.1
PMS2CL-201ENST00000348899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.17■■■□□ 2.1
PMS2CL-201ENST00000348899 ELP3Q9H9T3 547 aa28.17■■■□□ 2.1
PMS2CL-201ENST00000348899 TMOD2Q9NZR1 351 aa28.17■■■□□ 2.1
PMS2CL-201ENST00000348899 MAP3K9P80192 1104 aa28.16■■■□□ 2.1
PMS2CL-201ENST00000348899 MTX1Q13505 466 aa28.16■■■□□ 2.1
PMS2CL-201ENST00000348899 OPTNQ96CV9 577 aa28.16■■■□□ 2.1
PMS2CL-201ENST00000348899 GNL3LQ9NVN8 582 aaKnown RBP28.16■■■□□ 2.1
PMS2CL-201ENST00000348899 HPS5Q9UPZ3 1129 aa28.16■■■□□ 2.1
PMS2CL-201ENST00000348899 IPO8O15397 1037 aaKnown RBP28.15■■■□□ 2.1
PMS2CL-201ENST00000348899 TRIM27P14373 513 aa28.15■■■□□ 2.1
PMS2CL-201ENST00000348899 VGLL4Q14135 290 aa28.15■■■□□ 2.1
PMS2CL-201ENST00000348899 MS4A4AQ96JQ5 239 aa28.15■■■□□ 2.1
PMS2CL-201ENST00000348899 PTPN18Q99952 460 aa28.15■■■□□ 2.1
PMS2CL-201ENST00000348899 OTOFQ9HC10 1997 aa28.14■■■□□ 2.1
PMS2CL-201ENST00000348899 SEMA3EO15041 775 aa28.14■■■□□ 2.1
PMS2CL-201ENST00000348899 PHKA1P46020 1223 aa28.14■■■□□ 2.1
PMS2CL-201ENST00000348899 SALL1Q9NSC2 1324 aa28.14■■■□□ 2.09
PMS2CL-201ENST00000348899 BCAR3O75815 825 aa28.13■■■□□ 2.09
PMS2CL-201ENST00000348899 PRDX5P30044 214 aa28.13■■■□□ 2.09
PMS2CL-201ENST00000348899 ATF7IPQ6VMQ6 1270 aa28.13■■■□□ 2.09
PMS2CL-201ENST00000348899 CNKSR2Q8WXI2 1034 aa28.13■■■□□ 2.09
PMS2CL-201ENST00000348899 DENND2AQ9ULE3 1009 aa28.13■■■□□ 2.09
PMS2CL-201ENST00000348899 DAGLAQ9Y4D2 1042 aa28.13■■■□□ 2.09
PMS2CL-201ENST00000348899 SRGAP3O43295 1099 aa28.12■■■□□ 2.09
PMS2CL-201ENST00000348899 ADORA1P30542 326 aa28.12■■■□□ 2.09
PMS2CL-201ENST00000348899 DIXDC1Q155Q3 683 aa28.12■■■□□ 2.09
PMS2CL-201ENST00000348899 OTUD7BQ6GQQ9 843 aa28.12■■■□□ 2.09
PMS2CL-201ENST00000348899 TNNQ9UQP3 1299 aa28.12■■■□□ 2.09
PMS2CL-201ENST00000348899 RPAP1Q9BWH6 1393 aaPredicted RBP28.11■■■□□ 2.09
PMS2CL-201ENST00000348899 CCDC102BQ68D86 513 aa28.11■■■□□ 2.09
PMS2CL-201ENST00000348899 HOOK2Q96ED9 719 aa28.11■■■□□ 2.09
PMS2CL-201ENST00000348899 CSADQ9Y600 493 aa28.11■■■□□ 2.09
PMS2CL-201ENST00000348899 LDHBP07195 334 aaKnown RBP28.1■■■□□ 2.09
PMS2CL-201ENST00000348899 CDC42EP5Q6NZY7 148 aa28.1■■■□□ 2.09
PMS2CL-201ENST00000348899 FBXO46Q6PJ61 603 aaPredicted RBP28.1■■■□□ 2.09
PMS2CL-201ENST00000348899 SOX10P56693 466 aa28.09■■■□□ 2.09
PMS2CL-201ENST00000348899 TIMM10P62072 90 aa28.09■■■□□ 2.09
PMS2CL-201ENST00000348899 CRHR2Q13324 411 aa28.09■■■□□ 2.09
PMS2CL-201ENST00000348899 FRAT1Q92837 279 aaPredicted RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms