RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 GNPATO15228 680 aa16.85■□□□□ 0.29
NUP50-201ENST00000347635 CCDC175P0C221 793 aa16.85■□□□□ 0.29
NUP50-201ENST00000347635 KBTBD3Q8NAB2 608 aa16.85■□□□□ 0.29
NUP50-201ENST00000347635 PYM1Q9BRP8 204 aaKnown RBP16.85■□□□□ 0.29
NUP50-201ENST00000347635 ZDHHC9Q9Y397 364 aa16.85■□□□□ 0.29
NUP50-201ENST00000347635 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
NUP50-201ENST00000347635 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
NUP50-201ENST00000347635 PPRC1Q5VV67 1664 aaKnown RBP16.85■□□□□ 0.29
NUP50-201ENST00000347635 ATP5JP18859 108 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 POLD1P28340 1107 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 GCKRQ14397 625 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 GOLGA1Q92805 767 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 EAF2Q96CJ1 260 aaPredicted RBP16.84■□□□□ 0.29
NUP50-201ENST00000347635 MYO6Q9UM54 1294 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 NLRP5P59047 1200 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 GABPB1Q06547 395 aaPredicted RBP16.84■□□□□ 0.29
NUP50-201ENST00000347635 LRMPQ12912 555 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 ELF2Q15723 593 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 RTN1Q16799 776 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 FKBP15Q5T1M5 1219 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 ZNF804AQ7Z570 1209 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.84■□□□□ 0.29
NUP50-201ENST00000347635 KRT18P05783 430 aaKnown RBP16.84■□□□□ 0.29
NUP50-201ENST00000347635 ANO1Q5XXA6 986 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 MAP4K1Q92918 833 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 STK32BQ9NY57 414 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 NDUFB9Q9Y6M9 179 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 SH3TC1Q8TE82 1336 aa16.84■□□□□ 0.29
NUP50-201ENST00000347635 CYP2E1P05181 493 aaPredicted RBP16.83■□□□□ 0.29
NUP50-201ENST00000347635 TRPC5Q9UL62 973 aaPredicted RBP16.83■□□□□ 0.29
NUP50-201ENST00000347635 KCNQ3O43525 872 aa16.83■□□□□ 0.29
NUP50-201ENST00000347635 CDC42BPGQ6DT37 1551 aa16.83■□□□□ 0.28
NUP50-201ENST00000347635 N4BP3O15049 544 aa16.83■□□□□ 0.28
NUP50-201ENST00000347635 DDIT3P35638 169 aa16.83■□□□□ 0.28
NUP50-201ENST00000347635 AFMP43652 599 aa16.83■□□□□ 0.28
NUP50-201ENST00000347635 CCDC178Q5BJE1 867 aa16.83■□□□□ 0.28
NUP50-201ENST00000347635 CRNKL1Q9BZJ0 848 aaKnown RBP16.83■□□□□ 0.28
NUP50-201ENST00000347635 NLRP12P59046 1061 aa16.83■□□□□ 0.28
NUP50-201ENST00000347635 CEP112Q8N8E3 955 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 TIMM10P62072 90 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 FANCCQ00597 558 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 TMTC2Q8N394 836 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 KIDINS220Q9ULH0 1771 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 RDXP35241 583 aaKnown RBP16.82■□□□□ 0.28
NUP50-201ENST00000347635 PDE4BQ07343 736 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 PI4K2BQ8TCG2 481 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 EYA3Q99504 573 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 SPATA31A3Q5VYP0 1347 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 BMP15O95972 392 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 EDC3Q96F86 508 aaKnown RBP16.82■□□□□ 0.28
NUP50-201ENST00000347635 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
NUP50-201ENST00000347635 DLC1Q96QB1 1528 aa16.82■□□□□ 0.28
NUP50-201ENST00000347635 BAG1Q99933 345 aaPredicted RBP16.81■□□□□ 0.28
NUP50-201ENST00000347635 A0A1B0GUL7 405 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 BRINP3Q76B58 766 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 KIAA1524Q8TCG1 905 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
NUP50-201ENST00000347635 DSCC1Q9BVC3 393 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 THRAP3Q9Y2W1 955 aaKnown RBP16.81■□□□□ 0.28
NUP50-201ENST00000347635 CTAGE15A4D2H0 777 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 PDE8AO60658 829 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 GIGYF1O75420 1035 aaPredicted RBP16.81■□□□□ 0.28
NUP50-201ENST00000347635 LARGE1O95461 756 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 CTAGE8P0CG41 777 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 POLA2Q14181 598 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 CTAGE6Q86UF2 777 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 CTAGE4Q8IX94 777 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 KRI1Q8N9T8 703 aaKnown RBP16.81■□□□□ 0.28
NUP50-201ENST00000347635 TDRD7Q8NHU6 1098 aaKnown RBP16.81■□□□□ 0.28
NUP50-201ENST00000347635 MRFAP1L1Q96HT8 127 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 ZNF202O95125 648 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 LRRC8AQ8IWT6 810 aa16.81■□□□□ 0.28
NUP50-201ENST00000347635 NEURL1BA8MQ27 555 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 EYA2O00167 538 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 RXRAP19793 462 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 RRAGBQ5VZM2 374 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 OTUD7BQ6GQQ9 843 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 RMND1Q9NWS8 449 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 PFKFB2O60825 505 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 FLAD1Q8NFF5 587 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 ERBB3P21860 1342 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 SHTN1A0MZ66 631 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 MAPK8IP2Q13387 824 aaPredicted RBP16.8■□□□□ 0.28
NUP50-201ENST00000347635 CCDC194A0A1B0GVG4 234 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 E7EWF7 191 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 USO1O60763 962 aaKnown RBP16.8■□□□□ 0.28
NUP50-201ENST00000347635 CDC25BP30305 580 aa16.8■□□□□ 0.28
NUP50-201ENST00000347635 KARSQ15046 597 aaKnown RBP16.8■□□□□ 0.28
NUP50-201ENST00000347635 CTAGE9A4FU28 777 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 DHX58Q96C10 678 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 SEC63Q9UGP8 760 aaKnown RBP16.79■□□□□ 0.28
NUP50-201ENST00000347635 HDAC9Q9UKV0 1011 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 CNBD1Q8NA66 436 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 GNAT2P19087 354 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 EVCP57679 992 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 SPAG1Q07617 926 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 EHBP1Q8NDI1 1231 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 BMP2KQ9NSY1 1161 aaPredicted RBP16.79■□□□□ 0.28
NUP50-201ENST00000347635 SLC4A4Q9Y6R1 1079 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms